RNA–Protein interactions for RNA: ENST00000381254.6

GEN1-202, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 5 BASIC

Gene GEN1, Length 6,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-202ENST00000381254 NRDCO43847 1150 aa7.06□□□□□ -1.28
GEN1-202ENST00000381254 DDB1Q16531 1140 aa7.06□□□□□ -1.28
GEN1-202ENST00000381254 GJD4Q96KN9 370 aaPredicted RBP7.06□□□□□ -1.28
GEN1-202ENST00000381254 PLA2R1Q13018 1463 aa7.06□□□□□ -1.28
GEN1-202ENST00000381254 CDK13Q14004 1512 aaKnown RBP7.05□□□□□ -1.28
GEN1-202ENST00000381254 ARHGEF10O15013 1369 aa7.05□□□□□ -1.28
GEN1-202ENST00000381254 RTEL1-TNFRSF6BF6WH68 1400 aa7.05□□□□□ -1.28
GEN1-202ENST00000381254 KIAA1107Q9UPP5 1409 aa7.05□□□□□ -1.28
GEN1-202ENST00000381254 RIMS2Q9UQ26 1411 aa7.05□□□□□ -1.28
GEN1-202ENST00000381254 FLAD1Q8NFF5 587 aa7.05□□□□□ -1.28
GEN1-202ENST00000381254 KDM5DQ9BY66 1539 aa7.05□□□□□ -1.28
GEN1-202ENST00000381254 FER1L4A9Z1Z3 1794 aa7.05□□□□□ -1.28
GEN1-202ENST00000381254 CARD11Q9BXL7 1154 aa7.05□□□□□ -1.28
GEN1-202ENST00000381254 FAM9BQ8IZU0 186 aa7.05□□□□□ -1.28
GEN1-202ENST00000381254 MINK1Q8N4C8 1332 aaPredicted RBP7.05□□□□□ -1.28
GEN1-202ENST00000381254 TCOF1Q13428 1488 aaKnown RBP7.04□□□□□ -1.28
GEN1-202ENST00000381254 IPO8O15397 1037 aaKnown RBP7.04□□□□□ -1.28
GEN1-202ENST00000381254 ZNF526Q8TF50 670 aaPredicted RBP7.04□□□□□ -1.28
GEN1-202ENST00000381254 TNNT2P45379 298 aaPredicted RBP7.04□□□□□ -1.28
GEN1-202ENST00000381254 POTEAQ6S8J7 498 aa7.04□□□□□ -1.28
GEN1-202ENST00000381254 MLH3Q9UHC1 1453 aa7.03□□□□□ -1.28
GEN1-202ENST00000381254 ROCK1Q13464 1354 aa7.03□□□□□ -1.28
GEN1-202ENST00000381254 IL27Q8NEV9 243 aa7.03□□□□□ -1.28
GEN1-202ENST00000381254 PREX1Q8TCU6 1659 aa7.03□□□□□ -1.28
GEN1-202ENST00000381254 TERF2IPQ9NYB0 399 aa7.03□□□□□ -1.28
GEN1-202ENST00000381254 CTTNBP2Q8WZ74 1663 aa7.03□□□□□ -1.28
GEN1-202ENST00000381254 TTC37Q6PGP7 1564 aa7.03□□□□□ -1.28
GEN1-202ENST00000381254 IDI1Q13907 227 aa7.03□□□□□ -1.28
GEN1-202ENST00000381254 BTG4Q9NY30 223 aa7.03□□□□□ -1.28
GEN1-202ENST00000381254 MAP3K4Q9Y6R4 1608 aa7.03□□□□□ -1.28
GEN1-202ENST00000381254 ZNF330Q9Y3S2 320 aaPredicted RBP7.02□□□□□ -1.29
GEN1-202ENST00000381254 TMEM2Q9UHN6 1383 aa7.02□□□□□ -1.29
GEN1-202ENST00000381254 NLRP6P59044 892 aa7.02□□□□□ -1.29
GEN1-202ENST00000381254 KCNH5Q8NCM2 988 aa7.02□□□□□ -1.29
GEN1-202ENST00000381254 LTV1Q96GA3 475 aaPredicted RBP7.02□□□□□ -1.29
GEN1-202ENST00000381254 SETD1BQ9UPS6 1966 aaKnown RBP7.02□□□□□ -1.29
GEN1-202ENST00000381254 DPY19L2Q6NUT2 758 aa7.02□□□□□ -1.29
GEN1-202ENST00000381254 TRIM37O94972 964 aa7.02□□□□□ -1.29
GEN1-202ENST00000381254 EN1Q05925 392 aaPredicted RBP7.02□□□□□ -1.29
GEN1-202ENST00000381254 MAPK8IP3Q9UPT6 1336 aa7.01□□□□□ -1.29
GEN1-202ENST00000381254 FAM135BQ49AJ0 1406 aa7.01□□□□□ -1.29
GEN1-202ENST00000381254 ZC3H6P61129 1189 aaKnown RBP7.01□□□□□ -1.29
GEN1-202ENST00000381254 ATF5Q9Y2D1 282 aaPredicted RBP7.01□□□□□ -1.29
GEN1-202ENST00000381254 EHBP1L1Q8N3D4 1523 aa7.01□□□□□ -1.29
GEN1-202ENST00000381254 KIF13AQ9H1H9 1805 aa7.01□□□□□ -1.29
GEN1-202ENST00000381254 AGLP35573 1532 aa7.01□□□□□ -1.29
GEN1-202ENST00000381254 ATP7AQ04656 1500 aa7.01□□□□□ -1.29
GEN1-202ENST00000381254 KCNQ2O43526 872 aa7.01□□□□□ -1.29
GEN1-202ENST00000381254 CABP2Q9NPB3 220 aa7.01□□□□□ -1.29
GEN1-202ENST00000381254 GOLGA6L6A8MZA4 724 aa7□□□□□ -1.29
GEN1-202ENST00000381254 BCORL1Q5H9F3 1711 aa7□□□□□ -1.29
GEN1-202ENST00000381254 NUP153P49790 1475 aaKnown RBP7□□□□□ -1.29
GEN1-202ENST00000381254 GRM1Q13255 1194 aa7□□□□□ -1.29
GEN1-202ENST00000381254 C1orf141Q5JVX7 400 aa7□□□□□ -1.29
GEN1-202ENST00000381254 SUPT6HQ7KZ85 1726 aaKnown RBP7□□□□□ -1.29
GEN1-202ENST00000381254 NOP58Q9Y2X3 529 aaKnown RBP7□□□□□ -1.29
GEN1-202ENST00000381254 ZNF644Q9H582 1327 aaPredicted RBP7□□□□□ -1.29
GEN1-202ENST00000381254 SMG6Q86US8 1419 aaKnown RBP7□□□□□ -1.29
GEN1-202ENST00000381254 TATP17735 454 aaPredicted RBP6.99□□□□□ -1.29
GEN1-202ENST00000381254 NUTM2GQ5VZR2 741 aa6.99□□□□□ -1.29
GEN1-202ENST00000381254 TNS4Q8IZW8 715 aa6.99□□□□□ -1.29
GEN1-202ENST00000381254 TCP11L2Q8N4U5 519 aa6.99□□□□□ -1.29
GEN1-202ENST00000381254 DDX54Q8TDD1 881 aaKnown RBP6.99□□□□□ -1.29
GEN1-202ENST00000381254 PARP3Q9Y6F1 533 aa6.99□□□□□ -1.29
GEN1-202ENST00000381254 MAP3K1Q13233 1512 aa6.99□□□□□ -1.29
GEN1-202ENST00000381254 LMOD1P29536 600 aaPredicted RBP6.99□□□□□ -1.29
GEN1-202ENST00000381254 SMARCC1Q92922 1105 aaPredicted RBP6.99□□□□□ -1.29
GEN1-202ENST00000381254 KDM2BQ8NHM5 1336 aa6.99□□□□□ -1.29
GEN1-202ENST00000381254 FGD6Q6ZV73 1430 aa6.99□□□□□ -1.29
GEN1-202ENST00000381254 LMOD3Q0VAK6 560 aa6.99□□□□□ -1.29
GEN1-202ENST00000381254 ABCA9Q8IUA7 1624 aa6.99□□□□□ -1.29
GEN1-202ENST00000381254 ABCC1P33527 1531 aa6.99□□□□□ -1.29
GEN1-202ENST00000381254 COL17A1Q9UMD9 1497 aaPredicted RBP6.99□□□□□ -1.29
GEN1-202ENST00000381254 TRAK1Q9UPV9 953 aa6.99□□□□□ -1.29
GEN1-202ENST00000381254 HTATSF1O43719 755 aaKnown RBP6.98□□□□□ -1.29
GEN1-202ENST00000381254 CCDC144AA2RUR9 1427 aa6.98□□□□□ -1.29
GEN1-202ENST00000381254 RAB3GAP2Q9H2M9 1393 aa6.98□□□□□ -1.29
GEN1-202ENST00000381254 WWC1Q8IX03 1113 aa6.98□□□□□ -1.29
GEN1-202ENST00000381254 CCDC87Q9NVE4 849 aa6.98□□□□□ -1.29
GEN1-202ENST00000381254 MYO5CQ9NQX4 1742 aa6.98□□□□□ -1.29
GEN1-202ENST00000381254 PIK3R4Q99570 1358 aa6.98□□□□□ -1.29
GEN1-202ENST00000381254 MCCP23508 829 aa6.98□□□□□ -1.29
GEN1-202ENST00000381254 ARHGAP27Q6ZUM4 889 aa6.98□□□□□ -1.29
GEN1-202ENST00000381254 PRXQ9BXM0 1461 aa6.97□□□□□ -1.29
GEN1-202ENST00000381254 RWDD1Q9H446 243 aaPredicted RBP6.97□□□□□ -1.29
GEN1-202ENST00000381254 CEP170BQ9Y4F5 1589 aaPredicted RBP6.97□□□□□ -1.29
GEN1-202ENST00000381254 SYCP2Q9BX26 1530 aa6.97□□□□□ -1.29
GEN1-202ENST00000381254 COG3Q96JB2 828 aa6.97□□□□□ -1.29
GEN1-202ENST00000381254 BRINP3Q76B58 766 aa6.96□□□□□ -1.29
GEN1-202ENST00000381254 SUPT16HQ9Y5B9 1047 aaKnown RBP6.96□□□□□ -1.29
GEN1-202ENST00000381254 EVC2Q86UK5 1308 aa6.96□□□□□ -1.29
GEN1-202ENST00000381254 CWC22Q9HCG8 908 aaKnown RBP6.96□□□□□ -1.29
GEN1-202ENST00000381254 ANO8Q9HCE9 1232 aaPredicted RBP6.96□□□□□ -1.3
GEN1-202ENST00000381254 ISY1Q9ULR0 285 aaKnown RBP6.96□□□□□ -1.3
GEN1-202ENST00000381254 ZPR1O75312 459 aa6.96□□□□□ -1.3
GEN1-202ENST00000381254 DCAF11Q8TEB1 546 aa6.96□□□□□ -1.3
GEN1-202ENST00000381254 CGNL1Q0VF96 1302 aa6.96□□□□□ -1.3
GEN1-202ENST00000381254 GBP4Q96PP9 640 aa6.96□□□□□ -1.3
GEN1-202ENST00000381254 BLMP54132 1417 aaPredicted RBP6.96□□□□□ -1.3
GEN1-202ENST00000381254 RRBP1Q9P2E9 1410 aaKnown RBP6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms