RNA–Protein interactions for RNA: ENST00000381158.3

RAB3C-202, Transcript of RAB3C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB3C, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3C-202ENST00000381158 RNF39Q9H2S5 420 aa13.51□□□□□ -0.25
RAB3C-202ENST00000381158 DDX17Q92841 729 aaKnown RBP13.5□□□□□ -0.25
RAB3C-202ENST00000381158 CDC42BPGQ6DT37 1551 aa13.49□□□□□ -0.25
RAB3C-202ENST00000381158 PNPLA6Q8IY17 1366 aa13.48□□□□□ -0.25
RAB3C-202ENST00000381158 ATXN8OSP0DMR3 200 aa13.48□□□□□ -0.25
RAB3C-202ENST00000381158 CCDC144AA2RUR9 1427 aa13.47□□□□□ -0.25
RAB3C-202ENST00000381158 ADGRF5Q8IZF2 1346 aa13.47□□□□□ -0.25
RAB3C-202ENST00000381158 MEX3CQ5U5Q3 659 aaKnown RBP13.47□□□□□ -0.25
RAB3C-202ENST00000381158 MPHOSPH9Q99550 1183 aa13.47□□□□□ -0.25
RAB3C-202ENST00000381158 RGPD8O14715 1765 aaPredicted RBP13.47□□□□□ -0.25
RAB3C-202ENST00000381158 MARF1Q9Y4F3 1742 aaKnown RBP13.47□□□□□ -0.25
RAB3C-202ENST00000381158 COL22A1Q8NFW1 1626 aaPredicted RBP13.46□□□□□ -0.25
RAB3C-202ENST00000381158 NUTM2BA6NNL0 878 aaPredicted RBP13.46□□□□□ -0.25
RAB3C-202ENST00000381158 NUTM2EB1AL46 878 aaPredicted RBP13.46□□□□□ -0.25
RAB3C-202ENST00000381158 ZNF772Q68DY9 489 aaPredicted RBP13.46□□□□□ -0.25
RAB3C-202ENST00000381158 NUTM2AQ8IVF1 878 aaPredicted RBP13.46□□□□□ -0.25
RAB3C-202ENST00000381158 LRRC59Q96AG4 307 aaKnown RBP13.46□□□□□ -0.25
RAB3C-202ENST00000381158 TECPR2O15040 1411 aa13.46□□□□□ -0.26
RAB3C-202ENST00000381158 FMN2Q9NZ56 1722 aa13.45□□□□□ -0.26
RAB3C-202ENST00000381158 ORAI2Q96SN7 254 aa13.45□□□□□ -0.26
RAB3C-202ENST00000381158 SOS2Q07890 1332 aaPredicted RBP13.44□□□□□ -0.26
RAB3C-202ENST00000381158 PIK3C2GO75747 1445 aa13.44□□□□□ -0.26
RAB3C-202ENST00000381158 ANKRD30BQ9BXX2 1392 aa13.44□□□□□ -0.26
RAB3C-202ENST00000381158 RGL3Q3MIN7 710 aa13.43□□□□□ -0.26
RAB3C-202ENST00000381158 CDK12Q9NYV4 1490 aaPredicted RBP13.42□□□□□ -0.26
RAB3C-202ENST00000381158 AFF2P51816 1311 aa13.42□□□□□ -0.26
RAB3C-202ENST00000381158 NRXN1Q9ULB1 1477 aa13.42□□□□□ -0.26
RAB3C-202ENST00000381158 LRPPRCP42704 1394 aaKnown RBP13.41□□□□□ -0.26
RAB3C-202ENST00000381158 PXDNQ92626 1479 aa13.41□□□□□ -0.26
RAB3C-202ENST00000381158 C1QBPQ07021 282 aaKnown RBP13.4□□□□□ -0.26
RAB3C-202ENST00000381158 ABCC11Q96J66 1382 aa13.4□□□□□ -0.26
RAB3C-202ENST00000381158 PLEKHH1Q9ULM0 1364 aa13.4□□□□□ -0.26
RAB3C-202ENST00000381158 RXRBP28702 533 aa13.39□□□□□ -0.27
RAB3C-202ENST00000381158 TMEM132EQ6IEE7 984 aa13.39□□□□□ -0.27
RAB3C-202ENST00000381158 WAPLQ7Z5K2 1190 aa13.39□□□□□ -0.27
RAB3C-202ENST00000381158 MYOM2P54296 1465 aa13.39□□□□□ -0.27
RAB3C-202ENST00000381158 KIF1AQ12756 1690 aa13.39□□□□□ -0.27
RAB3C-202ENST00000381158 YTHDC2Q9H6S0 1430 aaKnown RBP13.39□□□□□ -0.27
RAB3C-202ENST00000381158 C8orf37Q96NL8 207 aa13.38□□□□□ -0.27
RAB3C-202ENST00000381158 STK26Q9P289 416 aa13.38□□□□□ -0.27
RAB3C-202ENST00000381158 RAB3GAP2Q9H2M9 1393 aa13.37□□□□□ -0.27
RAB3C-202ENST00000381158 UPF1Q92900 1129 aaKnown RBP eCLIP13.37□□□□□ -0.27
RAB3C-202ENST00000381158 RGS12O14924 1447 aa13.37□□□□□ -0.27
RAB3C-202ENST00000381158 ACIN1Q9UKV3 1341 aaKnown RBP13.36□□□□□ -0.27
RAB3C-202ENST00000381158 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.36□□□□□ -0.27
RAB3C-202ENST00000381158 USP32Q8NFA0 1604 aa13.35□□□□□ -0.27
RAB3C-202ENST00000381158 ADAMTS2O95450 1211 aa13.35□□□□□ -0.27
RAB3C-202ENST00000381158 ESCO1Q5FWF5 840 aa13.35□□□□□ -0.27
RAB3C-202ENST00000381158 C14orf93Q9H972 538 aaKnown RBP13.35□□□□□ -0.27
RAB3C-202ENST00000381158 QTRT2Q9H974 415 aaKnown RBP13.35□□□□□ -0.27
RAB3C-202ENST00000381158 NPHP3Q7Z494 1330 aa13.35□□□□□ -0.27
RAB3C-202ENST00000381158 ABCA3Q99758 1704 aa13.34□□□□□ -0.27
RAB3C-202ENST00000381158 ADGRB1O14514 1584 aa13.33□□□□□ -0.28
RAB3C-202ENST00000381158 NUTM2FA1L443 756 aa13.33□□□□□ -0.28
RAB3C-202ENST00000381158 FOXO3O43524 673 aa13.33□□□□□ -0.28
RAB3C-202ENST00000381158 RBM6P78332 1123 aaKnown RBP13.33□□□□□ -0.28
RAB3C-202ENST00000381158 CFAP70Q5T0N1 1121 aa13.33□□□□□ -0.28
RAB3C-202ENST00000381158 SIRT1Q96EB6 747 aa13.33□□□□□ -0.28
RAB3C-202ENST00000381158 NGLY1Q96IV0 654 aa13.33□□□□□ -0.28
RAB3C-202ENST00000381158 DLC1Q96QB1 1528 aa13.33□□□□□ -0.28
RAB3C-202ENST00000381158 ADGRB2O60241 1585 aa13.32□□□□□ -0.28
RAB3C-202ENST00000381158 XPCQ01831 940 aaPredicted RBP13.32□□□□□ -0.28
RAB3C-202ENST00000381158 FNBP4Q8N3X1 1017 aaPredicted RBP13.32□□□□□ -0.28
RAB3C-202ENST00000381158 ATRNO75882 1429 aa13.31□□□□□ -0.28
RAB3C-202ENST00000381158 BCL9LQ86UU0 1499 aa13.3□□□□□ -0.28
RAB3C-202ENST00000381158 USP21Q9UK80 565 aa13.3□□□□□ -0.28
RAB3C-202ENST00000381158 DHX57Q6P158 1386 aaKnown RBP13.3□□□□□ -0.28
RAB3C-202ENST00000381158 TRPM3Q9HCF6 1732 aaPredicted RBP13.3□□□□□ -0.28
RAB3C-202ENST00000381158 BRWD3Q6RI45 1802 aa13.29□□□□□ -0.28
RAB3C-202ENST00000381158 PLCH1Q4KWH8 1693 aa13.29□□□□□ -0.28
RAB3C-202ENST00000381158 ARHGEF28Q8N1W1 1705 aaKnown RBP13.29□□□□□ -0.28
RAB3C-202ENST00000381158 SPATA31A3Q5VYP0 1347 aa13.28□□□□□ -0.28
RAB3C-202ENST00000381158 NWD2Q9ULI1 1742 aa13.27□□□□□ -0.28
RAB3C-202ENST00000381158 TRPC5Q9UL62 973 aaPredicted RBP13.27□□□□□ -0.29
RAB3C-202ENST00000381158 GLI3P10071 1580 aa13.27□□□□□ -0.29
RAB3C-202ENST00000381158 ALS2Q96Q42 1657 aa13.27□□□□□ -0.29
RAB3C-202ENST00000381158 SLIT2O94813 1529 aa13.26□□□□□ -0.29
RAB3C-202ENST00000381158 PRAM1Q96QH2 718 aa13.26□□□□□ -0.29
RAB3C-202ENST00000381158 CRYBG1Q9Y4K1 1723 aa13.26□□□□□ -0.29
RAB3C-202ENST00000381158 TNS3Q68CZ2 1445 aa13.25□□□□□ -0.29
RAB3C-202ENST00000381158 KRT28Q7Z3Y7 464 aa13.25□□□□□ -0.29
RAB3C-202ENST00000381158 PHF8Q9UPP1 1060 aa13.25□□□□□ -0.29
RAB3C-202ENST00000381158 ITSN1Q15811 1721 aa13.25□□□□□ -0.29
RAB3C-202ENST00000381158 ANKARQ7Z5J8 1434 aa13.24□□□□□ -0.29
RAB3C-202ENST00000381158 SAFB2Q14151 953 aaKnown RBP eCLIP13.24□□□□□ -0.29
RAB3C-202ENST00000381158 ATF5Q9Y2D1 282 aaPredicted RBP13.24□□□□□ -0.29
RAB3C-202ENST00000381158 NRAPQ86VF7 1730 aa13.24□□□□□ -0.29
RAB3C-202ENST00000381158 KIAA1210Q9ULL0 1709 aa13.23□□□□□ -0.29
RAB3C-202ENST00000381158 HRCP23327 699 aa13.23□□□□□ -0.29
RAB3C-202ENST00000381158 SBNO1A3KN83 1393 aa13.22□□□□□ -0.29
RAB3C-202ENST00000381158 ATAD2Q6PL18 1390 aa13.22□□□□□ -0.29
RAB3C-202ENST00000381158 TULP4Q9NRJ4 1543 aa13.22□□□□□ -0.29
RAB3C-202ENST00000381158 DCAF11Q8TEB1 546 aa13.21□□□□□ -0.29
RAB3C-202ENST00000381158 POGKQ9P215 609 aa13.21□□□□□ -0.29
RAB3C-202ENST00000381158 TRAK1Q9UPV9 953 aa13.21□□□□□ -0.29
RAB3C-202ENST00000381158 KDM2AQ9Y2K7 1162 aa13.21□□□□□ -0.29
RAB3C-202ENST00000381158 RALGAPBQ86X10 1494 aa13.21□□□□□ -0.3
RAB3C-202ENST00000381158 TOPAZ1Q8N9V7 1692 aa13.21□□□□□ -0.3
RAB3C-202ENST00000381158 PRR36Q9H6K5 1346 aa13.2□□□□□ -0.3
RAB3C-202ENST00000381158 CABLES1Q8TDN4 633 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms