RNA–Protein interactions for RNA: ENST00000381033.4

PDX1-201, Transcript of pancreatic and duodenal homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDX1, Length 2,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1-201ENST00000381033 ARHGEF28Q8N1W1 1705 aaKnown RBP22.81■■□□□ 1.24
PDX1-201ENST00000381033 TULP4Q9NRJ4 1543 aa22.8■■□□□ 1.24
PDX1-201ENST00000381033 MINK1Q8N4C8 1332 aaPredicted RBP22.79■■□□□ 1.24
PDX1-201ENST00000381033 PRAM1Q96QH2 718 aa22.78■■□□□ 1.24
PDX1-201ENST00000381033 RBM19Q9Y4C8 960 aaKnown RBP22.78■■□□□ 1.24
PDX1-201ENST00000381033 PLIN1O60240 522 aa22.78■■□□□ 1.24
PDX1-201ENST00000381033 CCDC136Q96JN2 1154 aa22.77■■□□□ 1.24
PDX1-201ENST00000381033 EVC2Q86UK5 1308 aa22.77■■□□□ 1.24
PDX1-201ENST00000381033 RRP1P56182 461 aaKnown RBP22.76■■□□□ 1.23
PDX1-201ENST00000381033 PDE3BQ13370 1112 aa22.76■■□□□ 1.23
PDX1-201ENST00000381033 MORC1Q86VD1 984 aa22.76■■□□□ 1.23
PDX1-201ENST00000381033 ZFYVE9O95405 1425 aa22.76■■□□□ 1.23
PDX1-201ENST00000381033 SRPK2P78362 688 aaKnown RBP22.75■■□□□ 1.23
PDX1-201ENST00000381033 APAF1O14727 1248 aa22.74■■□□□ 1.23
PDX1-201ENST00000381033 AGLP35573 1532 aa22.74■■□□□ 1.23
PDX1-201ENST00000381033 EXOC6Q8TAG9 804 aa22.73■■□□□ 1.23
PDX1-201ENST00000381033 POGKQ9P215 609 aa22.73■■□□□ 1.23
PDX1-201ENST00000381033 INSRP06213 1382 aa22.71■■□□□ 1.23
PDX1-201ENST00000381033 WAPLQ7Z5K2 1190 aa22.71■■□□□ 1.23
PDX1-201ENST00000381033 SPINK5Q9NQ38 1064 aaPredicted RBP22.71■■□□□ 1.23
PDX1-201ENST00000381033 YTHDC2Q9H6S0 1430 aaKnown RBP22.71■■□□□ 1.23
PDX1-201ENST00000381033 PTPRMP28827 1452 aa22.71■■□□□ 1.23
PDX1-201ENST00000381033 REREQ9P2R6 1566 aa22.71■■□□□ 1.23
PDX1-201ENST00000381033 A2ML1A8K2U0 1454 aa22.7■■□□□ 1.22
PDX1-201ENST00000381033 ALKQ9UM73 1620 aa22.69■■□□□ 1.22
PDX1-201ENST00000381033 DMRT2Q9Y5R5 561 aa22.69■■□□□ 1.22
PDX1-201ENST00000381033 ZMYM3Q14202 1370 aa22.69■■□□□ 1.22
PDX1-201ENST00000381033 ZNF521Q96K83 1311 aa22.68■■□□□ 1.22
PDX1-201ENST00000381033 MTHFSP49914 203 aa22.68■■□□□ 1.22
PDX1-201ENST00000381033 ESF1Q9H501 851 aaKnown RBP22.68■■□□□ 1.22
PDX1-201ENST00000381033 DUSP27Q5VZP5 1158 aa22.67■■□□□ 1.22
PDX1-201ENST00000381033 PPP6R1Q9UPN7 881 aa22.67■■□□□ 1.22
PDX1-201ENST00000381033 ARHGEF40Q8TER5 1519 aa22.67■■□□□ 1.22
PDX1-201ENST00000381033 A0A1W2PP64 1363 aa22.66■■□□□ 1.22
PDX1-201ENST00000381033 CGNL1Q0VF96 1302 aa22.66■■□□□ 1.22
PDX1-201ENST00000381033 SPATA31D1Q6ZQQ2 1576 aa22.65■■□□□ 1.22
PDX1-201ENST00000381033 ANKRD36BQ8N2N9 1353 aa22.65■■□□□ 1.22
PDX1-201ENST00000381033 PLPPR3Q6T4P5 718 aa22.65■■□□□ 1.22
PDX1-201ENST00000381033 GGNBP2Q9H3C7 697 aa22.65■■□□□ 1.22
PDX1-201ENST00000381033 RIMS2Q9UQ26 1411 aa22.65■■□□□ 1.22
PDX1-201ENST00000381033 KLHL34Q8N239 644 aa22.65■■□□□ 1.22
PDX1-201ENST00000381033 NEUROD2Q15784 382 aa22.64■■□□□ 1.22
PDX1-201ENST00000381033 GOLGA2Q08379 1002 aa22.64■■□□□ 1.21
PDX1-201ENST00000381033 CDK19Q9BWU1 502 aa22.64■■□□□ 1.21
PDX1-201ENST00000381033 C20orf194Q5TEA3 1177 aa22.63■■□□□ 1.21
PDX1-201ENST00000381033 RRP7AQ9Y3A4 280 aaKnown RBP22.63■■□□□ 1.21
PDX1-201ENST00000381033 POLR3AO14802 1390 aaPredicted RBP22.62■■□□□ 1.21
PDX1-201ENST00000381033 CEBPAP49715 358 aaPredicted RBP22.62■■□□□ 1.21
PDX1-201ENST00000381033 CABP1Q9NZU7 370 aa22.61■■□□□ 1.21
PDX1-201ENST00000381033 SLFN5Q08AF3 891 aa22.59■■□□□ 1.21
PDX1-201ENST00000381033 PUS7Q96PZ0 661 aaKnown RBP22.59■■□□□ 1.21
PDX1-201ENST00000381033 METP08581 1390 aa22.58■■□□□ 1.21
PDX1-201ENST00000381033 FBLN1P23142 703 aa22.58■■□□□ 1.21
PDX1-201ENST00000381033 TXNDC2Q86VQ3 553 aa22.58■■□□□ 1.2
PDX1-201ENST00000381033 CD163L1Q9NR16 1453 aa22.57■■□□□ 1.2
PDX1-201ENST00000381033 SHPRHQ149N8 1683 aa22.57■■□□□ 1.2
PDX1-201ENST00000381033 CRBNQ96SW2 442 aa22.57■■□□□ 1.2
PDX1-201ENST00000381033 FYB1O15117 783 aa22.56■■□□□ 1.2
PDX1-201ENST00000381033 NCKAP5LQ9HCH0 1330 aa22.56■■□□□ 1.2
PDX1-201ENST00000381033 ABCC11Q96J66 1382 aa22.53■■□□□ 1.2
PDX1-201ENST00000381033 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.53■■□□□ 1.2
PDX1-201ENST00000381033 ARXQ96QS3 562 aa22.53■■□□□ 1.2
PDX1-201ENST00000381033 WWC1Q8IX03 1113 aa22.53■■□□□ 1.2
PDX1-201ENST00000381033 USP32Q8NFA0 1604 aa22.52■■□□□ 1.2
PDX1-201ENST00000381033 ATAD2Q6PL18 1390 aa22.52■■□□□ 1.2
PDX1-201ENST00000381033 TRMT2AQ8IZ69 625 aaKnown RBP22.52■■□□□ 1.2
PDX1-201ENST00000381033 TCP11L2Q8N4U5 519 aa22.52■■□□□ 1.2
PDX1-201ENST00000381033 SETD1AO15047 1707 aaKnown RBP22.52■■□□□ 1.2
PDX1-201ENST00000381033 NRXN3Q9Y4C0 1643 aa22.52■■□□□ 1.19
PDX1-201ENST00000381033 SKAP1Q86WV1 359 aa22.51■■□□□ 1.19
PDX1-201ENST00000381033 TERF2IPQ9NYB0 399 aa22.51■■□□□ 1.19
PDX1-201ENST00000381033 TNRQ92752 1358 aa22.51■■□□□ 1.19
PDX1-201ENST00000381033 BCAR3O75815 825 aa22.5■■□□□ 1.19
PDX1-201ENST00000381033 U2AF1L5P0DN76 240 aaPredicted RBP22.5■■□□□ 1.19
PDX1-201ENST00000381033 U2AF1Q01081 240 aaKnown RBP eCLIP22.5■■□□□ 1.19
PDX1-201ENST00000381033 RUNDC1Q96C34 613 aa22.48■■□□□ 1.19
PDX1-201ENST00000381033 PDIA4P13667 645 aaKnown RBP22.48■■□□□ 1.19
PDX1-201ENST00000381033 LTKP29376 864 aa22.48■■□□□ 1.19
PDX1-201ENST00000381033 CFAP53Q96M91 514 aa22.48■■□□□ 1.19
PDX1-201ENST00000381033 NLRP1Q9C000 1473 aa22.46■■□□□ 1.19
PDX1-201ENST00000381033 U2SURPO15042 1029 aaKnown RBP22.46■■□□□ 1.19
PDX1-201ENST00000381033 HDGFL2Q7Z4V5 671 aaPredicted RBP22.46■■□□□ 1.19
PDX1-201ENST00000381033 NSD2O96028 1365 aa22.46■■□□□ 1.19
PDX1-201ENST00000381033 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.45■■□□□ 1.18
PDX1-201ENST00000381033 NINLQ9Y2I6 1382 aa22.45■■□□□ 1.18
PDX1-201ENST00000381033 E9PSI1 815 aa22.45■■□□□ 1.18
PDX1-201ENST00000381033 TRHP20396 242 aaPredicted RBP22.44■■□□□ 1.18
PDX1-201ENST00000381033 ZRANB1Q9UGI0 708 aa22.44■■□□□ 1.18
PDX1-201ENST00000381033 NUTM2FA1L443 756 aa22.43■■□□□ 1.18
PDX1-201ENST00000381033 PPM1GO15355 546 aaPredicted RBP22.43■■□□□ 1.18
PDX1-201ENST00000381033 PDE4CQ08493 712 aa22.43■■□□□ 1.18
PDX1-201ENST00000381033 TMEM2Q9UHN6 1383 aa22.43■■□□□ 1.18
PDX1-201ENST00000381033 WASLO00401 505 aaPredicted RBP22.43■■□□□ 1.18
PDX1-201ENST00000381033 NKTRP30414 1462 aaKnown RBP22.43■■□□□ 1.18
PDX1-201ENST00000381033 MSH5O43196 834 aa22.42■■□□□ 1.18
PDX1-201ENST00000381033 SLC26A8Q96RN1 970 aa22.42■■□□□ 1.18
PDX1-201ENST00000381033 DLC1Q96QB1 1528 aa22.4■■□□□ 1.18
PDX1-201ENST00000381033 UBR1Q8IWV7 1749 aa22.4■■□□□ 1.18
PDX1-201ENST00000381033 IQSEC2Q5JU85 1478 aa22.4■■□□□ 1.18
PDX1-201ENST00000381033 NME9Q86XW9 330 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms