RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 NCOA3Q9Y6Q9 1424 aa26.52■■□□□ 1.84
SMN2-202ENST00000380742 EIF4G2P78344 907 aaKnown RBP eCLIP26.51■■□□□ 1.83
SMN2-202ENST00000380742 HSPA5P11021 654 aaKnown RBP26.5■■□□□ 1.83
SMN2-202ENST00000380742 ADGRL3Q9HAR2 1447 aa26.49■■□□□ 1.83
SMN2-202ENST00000380742 ADGRB2O60241 1585 aa26.48■■□□□ 1.83
SMN2-202ENST00000380742 MINK1Q8N4C8 1332 aaPredicted RBP26.48■■□□□ 1.83
SMN2-202ENST00000380742 C14orf37Q86TY3 774 aa26.46■■□□□ 1.83
SMN2-202ENST00000380742 TESK2Q96S53 571 aa26.46■■□□□ 1.83
SMN2-202ENST00000380742 HIRIP3Q9BW71 556 aaPredicted RBP26.46■■□□□ 1.83
SMN2-202ENST00000380742 SBNO2Q9Y2G9 1366 aa26.45■■□□□ 1.82
SMN2-202ENST00000380742 CDC42BPGQ6DT37 1551 aa26.43■■□□□ 1.82
SMN2-202ENST00000380742 C19orf44Q9H6X5 657 aa26.43■■□□□ 1.82
SMN2-202ENST00000380742 TULP4Q9NRJ4 1543 aa26.42■■□□□ 1.82
SMN2-202ENST00000380742 FMN2Q9NZ56 1722 aa26.41■■□□□ 1.82
SMN2-202ENST00000380742 MSH6P52701 1360 aa26.41■■□□□ 1.82
SMN2-202ENST00000380742 CERKQ8TCT0 537 aa26.4■■□□□ 1.82
SMN2-202ENST00000380742 RGPD8O14715 1765 aaPredicted RBP26.39■■□□□ 1.82
SMN2-202ENST00000380742 IQSEC2Q5JU85 1478 aa26.39■■□□□ 1.81
SMN2-202ENST00000380742 DCCP43146 1447 aa26.38■■□□□ 1.81
SMN2-202ENST00000380742 WASLO00401 505 aaPredicted RBP26.37■■□□□ 1.81
SMN2-202ENST00000380742 CDK19Q9BWU1 502 aa26.35■■□□□ 1.81
SMN2-202ENST00000380742 USP32Q8NFA0 1604 aa26.35■■□□□ 1.81
SMN2-202ENST00000380742 ATF3P18847 181 aa26.34■■□□□ 1.81
SMN2-202ENST00000380742 EVC2Q86UK5 1308 aa26.34■■□□□ 1.81
SMN2-202ENST00000380742 DISP3Q9P2K9 1392 aa26.34■■□□□ 1.81
SMN2-202ENST00000380742 CADPS2Q86UW7 1296 aa26.33■■□□□ 1.8
SMN2-202ENST00000380742 SLC24A1O60721 1099 aa26.32■■□□□ 1.8
SMN2-202ENST00000380742 TMF1P82094 1093 aa26.32■■□□□ 1.8
SMN2-202ENST00000380742 MST1RQ04912 1400 aa26.31■■□□□ 1.8
SMN2-202ENST00000380742 CABP2Q9NPB3 220 aa26.31■■□□□ 1.8
SMN2-202ENST00000380742 NUTM2FA1L443 756 aa26.3■■□□□ 1.8
SMN2-202ENST00000380742 C11orf95C9JLR9 678 aaPredicted RBP26.29■■□□□ 1.8
SMN2-202ENST00000380742 SRPK2P78362 688 aaKnown RBP26.29■■□□□ 1.8
SMN2-202ENST00000380742 PRR36Q9H6K5 1346 aa26.29■■□□□ 1.8
SMN2-202ENST00000380742 ITSN1Q15811 1721 aa26.28■■□□□ 1.8
SMN2-202ENST00000380742 ATP7BP35670 1465 aa26.27■■□□□ 1.8
SMN2-202ENST00000380742 TOPAZ1Q8N9V7 1692 aa26.27■■□□□ 1.8
SMN2-202ENST00000380742 C1orf167Q5SNV9 1468 aa26.27■■□□□ 1.8
SMN2-202ENST00000380742 ANKARQ7Z5J8 1434 aa26.26■■□□□ 1.79
SMN2-202ENST00000380742 NUDT16Q96DE0 195 aaKnown RBP26.25■■□□□ 1.79
SMN2-202ENST00000380742 SLAIN2Q9P270 581 aa26.24■■□□□ 1.79
SMN2-202ENST00000380742 PUS7Q96PZ0 661 aaKnown RBP26.22■■□□□ 1.79
SMN2-202ENST00000380742 MYOM1P52179 1685 aa26.21■■□□□ 1.79
SMN2-202ENST00000380742 UBAP1LF5GYI3 381 aa26.2■■□□□ 1.79
SMN2-202ENST00000380742 TOM1O60784 492 aa26.2■■□□□ 1.79
SMN2-202ENST00000380742 CDCA8Q53HL2 280 aa26.2■■□□□ 1.79
SMN2-202ENST00000380742 ATAD2Q6PL18 1390 aa26.2■■□□□ 1.78
SMN2-202ENST00000380742 ORAI2Q96SN7 254 aa26.2■■□□□ 1.78
SMN2-202ENST00000380742 KIF7Q2M1P5 1343 aa26.19■■□□□ 1.78
SMN2-202ENST00000380742 ROBO1Q9Y6N7 1651 aa26.19■■□□□ 1.78
SMN2-202ENST00000380742 CCDC61Q9Y6R9 512 aa26.19■■□□□ 1.78
SMN2-202ENST00000380742 ESCO1Q5FWF5 840 aa26.17■■□□□ 1.78
SMN2-202ENST00000380742 PPIP5K1Q6PFW1 1433 aa26.17■■□□□ 1.78
SMN2-202ENST00000380742 POLR3GLQ9BT43 218 aa26.17■■□□□ 1.78
SMN2-202ENST00000380742 KIF1AQ12756 1690 aa26.17■■□□□ 1.78
SMN2-202ENST00000380742 WASHC2AQ641Q2 1341 aa26.16■■□□□ 1.78
SMN2-202ENST00000380742 CCDC7Q96M83 1385 aa26.16■■□□□ 1.78
SMN2-202ENST00000380742 BRINP3Q76B58 766 aa26.14■■□□□ 1.78
SMN2-202ENST00000380742 CABP1Q9NZU7 370 aa26.14■■□□□ 1.78
SMN2-202ENST00000380742 PMFBP1Q8TBY8 1022 aa26.13■■□□□ 1.77
SMN2-202ENST00000380742 PHF8Q9UPP1 1060 aa26.13■■□□□ 1.77
SMN2-202ENST00000380742 AKAP12Q02952 1782 aa26.13■■□□□ 1.77
SMN2-202ENST00000380742 PLEKHG3A1L390 1219 aa26.12■■□□□ 1.77
SMN2-202ENST00000380742 PIP4K2BP78356 416 aa26.12■■□□□ 1.77
SMN2-202ENST00000380742 SLC12A5Q9H2X9 1139 aa26.12■■□□□ 1.77
SMN2-202ENST00000380742 TMC1Q8TDI8 760 aa26.11■■□□□ 1.77
SMN2-202ENST00000380742 NHSL1Q5SYE7 1610 aa26.1■■□□□ 1.77
SMN2-202ENST00000380742 ZNF316A6NFI3 1004 aaPredicted RBP26.09■■□□□ 1.77
SMN2-202ENST00000380742 CD163L1Q9NR16 1453 aa26.08■■□□□ 1.77
SMN2-202ENST00000380742 ACEP12821 1306 aa26.08■■□□□ 1.77
SMN2-202ENST00000380742 NINLQ9Y2I6 1382 aa26.08■■□□□ 1.77
SMN2-202ENST00000380742 SCAF1Q9H7N4 1312 aaKnown RBP26.07■■□□□ 1.76
SMN2-202ENST00000380742 POLR3AO14802 1390 aaPredicted RBP26.07■■□□□ 1.76
SMN2-202ENST00000380742 MON2Q7Z3U7 1717 aa26.06■■□□□ 1.76
SMN2-202ENST00000380742 FOXO3O43524 673 aa26.06■■□□□ 1.76
SMN2-202ENST00000380742 NGDNQ8NEJ9 315 aaKnown RBP26.06■■□□□ 1.76
SMN2-202ENST00000380742 DDX17Q92841 729 aaKnown RBP26.06■■□□□ 1.76
SMN2-202ENST00000380742 CPSF1Q10570 1443 aaKnown RBP26.04■■□□□ 1.76
SMN2-202ENST00000380742 AHDC1Q5TGY3 1603 aaPredicted RBP26.03■■□□□ 1.76
SMN2-202ENST00000380742 PHLPP1O60346 1717 aa26.02■■□□□ 1.76
SMN2-202ENST00000380742 A0A1W2PP64 1363 aa26.02■■□□□ 1.76
SMN2-202ENST00000380742 ANKRD36BQ8N2N9 1353 aa26.01■■□□□ 1.75
SMN2-202ENST00000380742 TRPM3Q9HCF6 1732 aaPredicted RBP26.01■■□□□ 1.75
SMN2-202ENST00000380742 PXDNQ92626 1479 aa26■■□□□ 1.75
SMN2-202ENST00000380742 NPHP3Q7Z494 1330 aa26■■□□□ 1.75
SMN2-202ENST00000380742 TERF2IPQ9NYB0 399 aa26■■□□□ 1.75
SMN2-202ENST00000380742 NRKQ7Z2Y5 1582 aa26■■□□□ 1.75
SMN2-202ENST00000380742 XPCQ01831 940 aaPredicted RBP25.99■■□□□ 1.75
SMN2-202ENST00000380742 PSME1Q06323 249 aa25.99■■□□□ 1.75
SMN2-202ENST00000380742 KRT28Q7Z3Y7 464 aa25.98■■□□□ 1.75
SMN2-202ENST00000380742 HDGFL2Q7Z4V5 671 aaPredicted RBP25.98■■□□□ 1.75
SMN2-202ENST00000380742 ZNF692Q9BU19 519 aaPredicted RBP25.98■■□□□ 1.75
SMN2-202ENST00000380742 USP6P35125 1406 aa25.98■■□□□ 1.75
SMN2-202ENST00000380742 KTN1Q86UP2 1357 aaKnown RBP25.98■■□□□ 1.75
SMN2-202ENST00000380742 PANK3Q9H999 370 aa25.97■■□□□ 1.75
SMN2-202ENST00000380742 COL16A1Q07092 1604 aaPredicted RBP25.96■■□□□ 1.75
SMN2-202ENST00000380742 SOS2Q07890 1332 aaPredicted RBP25.96■■□□□ 1.75
SMN2-202ENST00000380742 SSH2Q76I76 1423 aa25.95■■□□□ 1.75
SMN2-202ENST00000380742 CARD14Q9BXL6 1004 aa25.95■■□□□ 1.74
SMN2-202ENST00000380742 FBXO41Q8TF61 875 aa25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms