RNA–Protein interactions for RNA: ENST00000380107.5

TRIM6-203, Transcript of tripartite motif containing 6, humanhuman

TSL 1 (best) BASIC

Gene TRIM6, Length 2,590 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-203ENST00000380107 RIMBP3BA6NNM3 1639 aa11.21□□□□□ -0.62
TRIM6-203ENST00000380107 RIMBP3Q9UFD9 1639 aa11.21□□□□□ -0.62
TRIM6-203ENST00000380107 MAP3K4Q9Y6R4 1608 aa11.2□□□□□ -0.62
TRIM6-203ENST00000380107 NOS1P29475 1434 aa11.2□□□□□ -0.62
TRIM6-203ENST00000380107 MROH2AA6NES4 1674 aa11.2□□□□□ -0.62
TRIM6-203ENST00000380107 PDZRN3Q9UPQ7 1066 aa11.2□□□□□ -0.62
TRIM6-203ENST00000380107 ATP7AQ04656 1500 aa11.19□□□□□ -0.62
TRIM6-203ENST00000380107 FANCAO15360 1455 aa11.19□□□□□ -0.62
TRIM6-203ENST00000380107 GGT6Q6P531 493 aa11.19□□□□□ -0.62
TRIM6-203ENST00000380107 TSR2Q969E8 191 aaKnown RBP11.19□□□□□ -0.62
TRIM6-203ENST00000380107 RUNDC1Q96C34 613 aa11.19□□□□□ -0.62
TRIM6-203ENST00000380107 DEPDC5O75140 1603 aa11.18□□□□□ -0.62
TRIM6-203ENST00000380107 POLR3AO14802 1390 aaPredicted RBP11.18□□□□□ -0.62
TRIM6-203ENST00000380107 VIRMAQ69YN4 1812 aaKnown RBP11.18□□□□□ -0.62
TRIM6-203ENST00000380107 RTEL1-TNFRSF6BF6WH68 1400 aa11.18□□□□□ -0.62
TRIM6-203ENST00000380107 U2AF1L5P0DN76 240 aaPredicted RBP11.18□□□□□ -0.62
TRIM6-203ENST00000380107 U2AF1Q01081 240 aaKnown RBP eCLIP11.18□□□□□ -0.62
TRIM6-203ENST00000380107 STAC3Q96MF2 364 aa11.18□□□□□ -0.62
TRIM6-203ENST00000380107 KIF1BO60333 1816 aa11.18□□□□□ -0.62
TRIM6-203ENST00000380107 SHPRHQ149N8 1683 aa11.18□□□□□ -0.62
TRIM6-203ENST00000380107 MAPK8IP3Q9UPT6 1336 aa11.17□□□□□ -0.62
TRIM6-203ENST00000380107 CABP2Q9NPB3 220 aa11.17□□□□□ -0.62
TRIM6-203ENST00000380107 ADGRL1O94910 1474 aa11.16□□□□□ -0.62
TRIM6-203ENST00000380107 KIAA1210Q9ULL0 1709 aa11.16□□□□□ -0.62
TRIM6-203ENST00000380107 NLRP1Q9C000 1473 aa11.16□□□□□ -0.62
TRIM6-203ENST00000380107 MROH1Q8NDA8 1641 aa11.16□□□□□ -0.62
TRIM6-203ENST00000380107 U2SURPO15042 1029 aaKnown RBP11.15□□□□□ -0.63
TRIM6-203ENST00000380107 TBC1D2Q9BYX2 928 aa11.15□□□□□ -0.63
TRIM6-203ENST00000380107 VWDEQ8N2E2 1590 aa11.14□□□□□ -0.63
TRIM6-203ENST00000380107 INO80Q9ULG1 1556 aaPredicted RBP11.14□□□□□ -0.63
TRIM6-203ENST00000380107 PPRC1Q5VV67 1664 aaKnown RBP11.14□□□□□ -0.63
TRIM6-203ENST00000380107 MYOM2P54296 1465 aa11.14□□□□□ -0.63
TRIM6-203ENST00000380107 BECN1Q14457 450 aa11.14□□□□□ -0.63
TRIM6-203ENST00000380107 PMFBP1Q8TBY8 1022 aa11.14□□□□□ -0.63
TRIM6-203ENST00000380107 FTSJ3Q8IY81 847 aaKnown RBP11.14□□□□□ -0.63
TRIM6-203ENST00000380107 STK26Q9P289 416 aa11.14□□□□□ -0.63
TRIM6-203ENST00000380107 GGNBP2Q9H3C7 697 aa11.13□□□□□ -0.63
TRIM6-203ENST00000380107 QRICH2Q9H0J4 1663 aa11.13□□□□□ -0.63
TRIM6-203ENST00000380107 MFAP1P55081 439 aaKnown RBP11.13□□□□□ -0.63
TRIM6-203ENST00000380107 TBC1D32Q96NH3 1257 aa11.13□□□□□ -0.63
TRIM6-203ENST00000380107 IFT172Q9UG01 1749 aa11.13□□□□□ -0.63
TRIM6-203ENST00000380107 IQSEC2Q5JU85 1478 aa11.12□□□□□ -0.63
TRIM6-203ENST00000380107 EXOSC9Q06265 439 aaKnown RBP11.12□□□□□ -0.63
TRIM6-203ENST00000380107 WDR63Q8IWG1 891 aa11.12□□□□□ -0.63
TRIM6-203ENST00000380107 NGEFQ8N5V2 710 aa11.12□□□□□ -0.63
TRIM6-203ENST00000380107 CFAP53Q96M91 514 aa11.12□□□□□ -0.63
TRIM6-203ENST00000380107 GZF1Q9H116 711 aaPredicted RBP11.12□□□□□ -0.63
TRIM6-203ENST00000380107 C14orf93Q9H972 538 aaKnown RBP11.12□□□□□ -0.63
TRIM6-203ENST00000380107 UPF2Q9HAU5 1272 aaKnown RBP11.12□□□□□ -0.63
TRIM6-203ENST00000380107 EFCAB6Q5THR3 1501 aa11.12□□□□□ -0.63
TRIM6-203ENST00000380107 EIF5BO60841 1220 aaKnown RBP11.12□□□□□ -0.63
TRIM6-203ENST00000380107 MVPQ14764 893 aaKnown RBP11.12□□□□□ -0.63
TRIM6-203ENST00000380107 RWDD1Q9H446 243 aaPredicted RBP11.12□□□□□ -0.63
TRIM6-203ENST00000380107 ANTXR1Q9H6X2 564 aa11.12□□□□□ -0.63
TRIM6-203ENST00000380107 SMC4Q9NTJ3 1288 aa11.12□□□□□ -0.63
TRIM6-203ENST00000380107 UHRF1BP1LA0JNW5 1464 aa11.12□□□□□ -0.63
TRIM6-203ENST00000380107 ZNF518AQ6AHZ1 1483 aa11.11□□□□□ -0.63
TRIM6-203ENST00000380107 ITPRIPQ8IWB1 547 aa11.11□□□□□ -0.63
TRIM6-203ENST00000380107 NINLQ9Y2I6 1382 aa11.11□□□□□ -0.63
TRIM6-203ENST00000380107 DZIP1LQ8IYY4 767 aaKnown RBP11.11□□□□□ -0.63
TRIM6-203ENST00000380107 TRIM27P14373 513 aa11.1□□□□□ -0.63
TRIM6-203ENST00000380107 FBLN1P23142 703 aa11.1□□□□□ -0.63
TRIM6-203ENST00000380107 ZKSCAN2Q63HK3 967 aa11.1□□□□□ -0.63
TRIM6-203ENST00000380107 NPATQ14207 1427 aa11.1□□□□□ -0.63
TRIM6-203ENST00000380107 SSH1Q8WYL5 1049 aa11.1□□□□□ -0.63
TRIM6-203ENST00000380107 MYH16Q9H6N6 1097 aa11.1□□□□□ -0.63
TRIM6-203ENST00000380107 ABCA9Q8IUA7 1624 aa11.1□□□□□ -0.63
TRIM6-203ENST00000380107 KIDINS220Q9ULH0 1771 aa11.09□□□□□ -0.63
TRIM6-203ENST00000380107 SBNO2Q9Y2G9 1366 aa11.09□□□□□ -0.63
TRIM6-203ENST00000380107 MYO3AQ8NEV4 1616 aa11.09□□□□□ -0.63
TRIM6-203ENST00000380107 PRKCSHP14314 528 aaPredicted RBP11.09□□□□□ -0.63
TRIM6-203ENST00000380107 NRXN1Q9ULB1 1477 aa11.09□□□□□ -0.63
TRIM6-203ENST00000380107 SRPK2P78362 688 aaKnown RBP11.09□□□□□ -0.63
TRIM6-203ENST00000380107 PLPPR3Q6T4P5 718 aa11.08□□□□□ -0.64
TRIM6-203ENST00000380107 NOB1Q9ULX3 412 aaKnown RBP11.08□□□□□ -0.64
TRIM6-203ENST00000380107 ADGRB3O60242 1522 aa11.08□□□□□ -0.64
TRIM6-203ENST00000380107 ADGRB1O14514 1584 aa11.08□□□□□ -0.64
TRIM6-203ENST00000380107 ZC3H13Q5T200 1668 aaKnown RBP11.07□□□□□ -0.64
TRIM6-203ENST00000380107 TRIM35Q9UPQ4 493 aa11.07□□□□□ -0.64
TRIM6-203ENST00000380107 EVC2Q86UK5 1308 aa11.07□□□□□ -0.64
TRIM6-203ENST00000380107 CD109Q6YHK3 1445 aa11.07□□□□□ -0.64
TRIM6-203ENST00000380107 TMPOP42166 694 aaKnown RBP11.07□□□□□ -0.64
TRIM6-203ENST00000380107 CCDC27Q2M243 656 aa11.07□□□□□ -0.64
TRIM6-203ENST00000380107 TMEM57Q8N5G2 664 aa11.07□□□□□ -0.64
TRIM6-203ENST00000380107 C22orf23Q9BZE7 217 aa11.07□□□□□ -0.64
TRIM6-203ENST00000380107 ARAP3Q8WWN8 1544 aa11.07□□□□□ -0.64
TRIM6-203ENST00000380107 PPLO60437 1756 aa11.06□□□□□ -0.64
TRIM6-203ENST00000380107 MINK1Q8N4C8 1332 aaPredicted RBP11.06□□□□□ -0.64
TRIM6-203ENST00000380107 ASXL2Q76L83 1435 aa11.06□□□□□ -0.64
TRIM6-203ENST00000380107 TULP4Q9NRJ4 1543 aa11.06□□□□□ -0.64
TRIM6-203ENST00000380107 RIPK4P57078 832 aa11.05□□□□□ -0.64
TRIM6-203ENST00000380107 PLEKHF1Q96S99 279 aa11.05□□□□□ -0.64
TRIM6-203ENST00000380107 PANK2Q9BZ23 570 aa11.05□□□□□ -0.64
TRIM6-203ENST00000380107 LNPKQ9C0E8 428 aa11.05□□□□□ -0.64
TRIM6-203ENST00000380107 A0A1W2PP64 1363 aa11.05□□□□□ -0.64
TRIM6-203ENST00000380107 ANKRD36BQ8N2N9 1353 aa11.05□□□□□ -0.64
TRIM6-203ENST00000380107 RAPGEF3O95398 923 aa11.05□□□□□ -0.64
TRIM6-203ENST00000380107 NEURL4Q96JN8 1562 aa11.04□□□□□ -0.64
TRIM6-203ENST00000380107 SETBP1Q9Y6X0 1596 aa11.04□□□□□ -0.64
TRIM6-203ENST00000380107 ATF7IPQ6VMQ6 1270 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms