RNA–Protein interactions for RNA: ENST00000380051.6

RPP40-202, Transcript of ribonuclease P/MRP subunit p40, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RPP40, Length 1,483 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-202ENST00000380051 NWD1Q149M9 1564 aa21.05■□□□□ 0.96
RPP40-202ENST00000380051 TMF1P82094 1093 aa21.04■□□□□ 0.96
RPP40-202ENST00000380051 QRICH2Q9H0J4 1663 aa21.02■□□□□ 0.96
RPP40-202ENST00000380051 PLEKHH1Q9ULM0 1364 aa21.02■□□□□ 0.95
RPP40-202ENST00000380051 SAFB2Q14151 953 aaKnown RBP eCLIP21.01■□□□□ 0.95
RPP40-202ENST00000380051 NKTRP30414 1462 aaKnown RBP21■□□□□ 0.95
RPP40-202ENST00000380051 CDCA8Q53HL2 280 aa21■□□□□ 0.95
RPP40-202ENST00000380051 C11orf95C9JLR9 678 aaPredicted RBP20.99■□□□□ 0.95
RPP40-202ENST00000380051 PROSER2Q86WR7 435 aaPredicted RBP20.98■□□□□ 0.95
RPP40-202ENST00000380051 EVC2Q86UK5 1308 aa20.98■□□□□ 0.95
RPP40-202ENST00000380051 MINK1Q8N4C8 1332 aaPredicted RBP20.98■□□□□ 0.95
RPP40-202ENST00000380051 PUS7Q96PZ0 661 aaKnown RBP20.96■□□□□ 0.95
RPP40-202ENST00000380051 STRCP1A6NGW2 1772 aa20.96■□□□□ 0.95
RPP40-202ENST00000380051 DCAF8L1A6NGE4 600 aa20.95■□□□□ 0.94
RPP40-202ENST00000380051 ZNF335Q9H4Z2 1342 aaPredicted RBP20.95■□□□□ 0.94
RPP40-202ENST00000380051 DISP3Q9P2K9 1392 aa20.95■□□□□ 0.94
RPP40-202ENST00000380051 KIF7Q2M1P5 1343 aa20.94■□□□□ 0.94
RPP40-202ENST00000380051 WASHC2AQ641Q2 1341 aa20.94■□□□□ 0.94
RPP40-202ENST00000380051 CCDC7Q96M83 1385 aa20.94■□□□□ 0.94
RPP40-202ENST00000380051 NCOA3Q9Y6Q9 1424 aa20.94■□□□□ 0.94
RPP40-202ENST00000380051 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.94■□□□□ 0.94
RPP40-202ENST00000380051 WASLO00401 505 aaPredicted RBP20.93■□□□□ 0.94
RPP40-202ENST00000380051 CDK19Q9BWU1 502 aa20.92■□□□□ 0.94
RPP40-202ENST00000380051 ADGRB2O60241 1585 aa20.91■□□□□ 0.94
RPP40-202ENST00000380051 TULP4Q9NRJ4 1543 aa20.91■□□□□ 0.94
RPP40-202ENST00000380051 TMEM94Q12767 1356 aa20.89■□□□□ 0.93
RPP40-202ENST00000380051 SRPK2P78362 688 aaKnown RBP20.88■□□□□ 0.93
RPP40-202ENST00000380051 C14orf37Q86TY3 774 aa20.88■□□□□ 0.93
RPP40-202ENST00000380051 RBM33Q96EV2 1170 aaKnown RBP20.88■□□□□ 0.93
RPP40-202ENST00000380051 POLR3GLQ9BT43 218 aa20.88■□□□□ 0.93
RPP40-202ENST00000380051 ADGRL3Q9HAR2 1447 aa20.88■□□□□ 0.93
RPP40-202ENST00000380051 C19orf44Q9H6X5 657 aa20.88■□□□□ 0.93
RPP40-202ENST00000380051 CABP2Q9NPB3 220 aa20.88■□□□□ 0.93
RPP40-202ENST00000380051 LRRC7Q96NW7 1537 aa20.87■□□□□ 0.93
RPP40-202ENST00000380051 ATAD2Q6PL18 1390 aa20.86■□□□□ 0.93
RPP40-202ENST00000380051 NALCNQ8IZF0 1738 aa20.84■□□□□ 0.93
RPP40-202ENST00000380051 CDC42BPGQ6DT37 1551 aa20.83■□□□□ 0.93
RPP40-202ENST00000380051 DDX10Q13206 875 aaKnown RBP20.82■□□□□ 0.92
RPP40-202ENST00000380051 CNKSR2Q8WXI2 1034 aa20.82■□□□□ 0.92
RPP40-202ENST00000380051 HOXD11P31277 338 aaPredicted RBP20.81■□□□□ 0.92
RPP40-202ENST00000380051 NUDT16Q96DE0 195 aaKnown RBP20.81■□□□□ 0.92
RPP40-202ENST00000380051 LTBP4Q8N2S1 1624 aa20.81■□□□□ 0.92
RPP40-202ENST00000380051 MSH6P52701 1360 aa20.81■□□□□ 0.92
RPP40-202ENST00000380051 NINLQ9Y2I6 1382 aa20.81■□□□□ 0.92
RPP40-202ENST00000380051 CCDC61Q9Y6R9 512 aa20.81■□□□□ 0.92
RPP40-202ENST00000380051 DCCP43146 1447 aa20.8■□□□□ 0.92
RPP40-202ENST00000380051 XIRP1Q702N8 1843 aaKnown RBP20.8■□□□□ 0.92
RPP40-202ENST00000380051 CACNB1Q02641 598 aaPredicted RBP20.8■□□□□ 0.92
RPP40-202ENST00000380051 ANKARQ7Z5J8 1434 aa20.8■□□□□ 0.92
RPP40-202ENST00000380051 FMN2Q9NZ56 1722 aa20.79■□□□□ 0.92
RPP40-202ENST00000380051 ATF3P18847 181 aa20.79■□□□□ 0.92
RPP40-202ENST00000380051 TMC1Q8TDI8 760 aa20.79■□□□□ 0.92
RPP40-202ENST00000380051 CADPS2Q86UW7 1296 aa20.78■□□□□ 0.92
RPP40-202ENST00000380051 SLC12A5Q9H2X9 1139 aa20.77■□□□□ 0.92
RPP40-202ENST00000380051 PRR36Q9H6K5 1346 aa20.77■□□□□ 0.92
RPP40-202ENST00000380051 ATP7BP35670 1465 aa20.76■□□□□ 0.91
RPP40-202ENST00000380051 NUTM2FA1L443 756 aa20.75■□□□□ 0.91
RPP40-202ENST00000380051 CABP1Q9NZU7 370 aa20.75■□□□□ 0.91
RPP40-202ENST00000380051 MYOM1P52179 1685 aa20.75■□□□□ 0.91
RPP40-202ENST00000380051 PANK3Q9H999 370 aa20.75■□□□□ 0.91
RPP40-202ENST00000380051 PLEKHG3A1L390 1219 aa20.74■□□□□ 0.91
RPP40-202ENST00000380051 PPIP5K1Q6PFW1 1433 aa20.74■□□□□ 0.91
RPP40-202ENST00000380051 USP32Q8NFA0 1604 aa20.73■□□□□ 0.91
RPP40-202ENST00000380051 TERF2IPQ9NYB0 399 aa20.73■□□□□ 0.91
RPP40-202ENST00000380051 ITSN1Q15811 1721 aa20.71■□□□□ 0.91
RPP40-202ENST00000380051 ANKRD36BQ8N2N9 1353 aa20.71■□□□□ 0.91
RPP40-202ENST00000380051 RGPD8O14715 1765 aaPredicted RBP20.71■□□□□ 0.91
RPP40-202ENST00000380051 TOPAZ1Q8N9V7 1692 aa20.71■□□□□ 0.91
RPP40-202ENST00000380051 DIEXFQ68CQ4 756 aaKnown RBP20.7■□□□□ 0.9
RPP40-202ENST00000380051 HDGFL2Q7Z4V5 671 aaPredicted RBP20.7■□□□□ 0.9
RPP40-202ENST00000380051 MST1RQ04912 1400 aa20.7■□□□□ 0.9
RPP40-202ENST00000380051 ZNF692Q9BU19 519 aaPredicted RBP20.69■□□□□ 0.9
RPP40-202ENST00000380051 C1orf167Q5SNV9 1468 aa20.69■□□□□ 0.9
RPP40-202ENST00000380051 ESCO1Q5FWF5 840 aa20.69■□□□□ 0.9
RPP40-202ENST00000380051 PER1O15534 1290 aaPredicted RBP20.68■□□□□ 0.9
RPP40-202ENST00000380051 PHF8Q9UPP1 1060 aa20.68■□□□□ 0.9
RPP40-202ENST00000380051 RNF216Q9NWF9 866 aaPredicted RBP20.67■□□□□ 0.9
RPP40-202ENST00000380051 CD163L1Q9NR16 1453 aa20.67■□□□□ 0.9
RPP40-202ENST00000380051 CPSF1Q10570 1443 aaKnown RBP20.67■□□□□ 0.9
RPP40-202ENST00000380051 ACEP12821 1306 aa20.66■□□□□ 0.9
RPP40-202ENST00000380051 PMFBP1Q8TBY8 1022 aa20.66■□□□□ 0.9
RPP40-202ENST00000380051 SLAIN2Q9P270 581 aa20.66■□□□□ 0.9
RPP40-202ENST00000380051 A0A1W2PP64 1363 aa20.66■□□□□ 0.9
RPP40-202ENST00000380051 NGDNQ8NEJ9 315 aaKnown RBP20.65■□□□□ 0.9
RPP40-202ENST00000380051 ORAI2Q96SN7 254 aa20.65■□□□□ 0.9
RPP40-202ENST00000380051 CARD14Q9BXL6 1004 aa20.65■□□□□ 0.9
RPP40-202ENST00000380051 KNSTRNQ9Y448 316 aa20.65■□□□□ 0.9
RPP40-202ENST00000380051 POLR3AO14802 1390 aaPredicted RBP20.65■□□□□ 0.9
RPP40-202ENST00000380051 IQSEC2Q5JU85 1478 aa20.65■□□□□ 0.9
RPP40-202ENST00000380051 KTN1Q86UP2 1357 aaKnown RBP20.62■□□□□ 0.89
RPP40-202ENST00000380051 AKAP12Q02952 1782 aa20.62■□□□□ 0.89
RPP40-202ENST00000380051 KIF1AQ12756 1690 aa20.61■□□□□ 0.89
RPP40-202ENST00000380051 CERKQ8TCT0 537 aa20.61■□□□□ 0.89
RPP40-202ENST00000380051 NSD3Q9BZ95 1437 aa20.6■□□□□ 0.89
RPP40-202ENST00000380051 BRD4O60885 1362 aaPredicted RBP20.59■□□□□ 0.89
RPP40-202ENST00000380051 TOM1O60784 492 aa20.59■□□□□ 0.89
RPP40-202ENST00000380051 EDC4Q6P2E9 1401 aaKnown RBP20.59■□□□□ 0.89
RPP40-202ENST00000380051 USP6P35125 1406 aa20.58■□□□□ 0.89
RPP40-202ENST00000380051 MON2Q7Z3U7 1717 aa20.58■□□□□ 0.88
RPP40-202ENST00000380051 CGNL1Q0VF96 1302 aa20.58■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms