RNA–Protein interactions for RNA: ENST00000379538.7

SNCAIP-203, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 2,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-203ENST00000379538 PPM1GO15355 546 aaPredicted RBP18.21■□□□□ 0.51
SNCAIP-203ENST00000379538 LTKP29376 864 aa18.21■□□□□ 0.51
SNCAIP-203ENST00000379538 STAC3Q96MF2 364 aa18.21■□□□□ 0.51
SNCAIP-203ENST00000379538 CRBNQ96SW2 442 aa18.2■□□□□ 0.5
SNCAIP-203ENST00000379538 PANK3Q9H999 370 aa18.2■□□□□ 0.5
SNCAIP-203ENST00000379538 C20orf194Q5TEA3 1177 aa18.19■□□□□ 0.5
SNCAIP-203ENST00000379538 RIMS2Q9UQ26 1411 aa18.19■□□□□ 0.5
SNCAIP-203ENST00000379538 C3P01024 1663 aa18.18■□□□□ 0.5
SNCAIP-203ENST00000379538 WAPLQ7Z5K2 1190 aa18.18■□□□□ 0.5
SNCAIP-203ENST00000379538 SLC26A8Q96RN1 970 aa18.18■□□□□ 0.5
SNCAIP-203ENST00000379538 CC2D1BQ5T0F9 858 aaKnown RBP18.18■□□□□ 0.5
SNCAIP-203ENST00000379538 LRPPRCP42704 1394 aaKnown RBP18.16■□□□□ 0.5
SNCAIP-203ENST00000379538 CENPJQ9HC77 1338 aaPredicted RBP18.16■□□□□ 0.5
SNCAIP-203ENST00000379538 ADGRB1O14514 1584 aa18.16■□□□□ 0.5
SNCAIP-203ENST00000379538 MINK1Q8N4C8 1332 aaPredicted RBP18.15■□□□□ 0.5
SNCAIP-203ENST00000379538 MS4A1P11836 297 aa18.15■□□□□ 0.5
SNCAIP-203ENST00000379538 PRAM1Q96QH2 718 aa18.15■□□□□ 0.5
SNCAIP-203ENST00000379538 IQGAP1P46940 1657 aa18.15■□□□□ 0.5
SNCAIP-203ENST00000379538 TXNDC2Q86VQ3 553 aa18.14■□□□□ 0.49
SNCAIP-203ENST00000379538 FRAT2O75474 233 aaPredicted RBP18.13■□□□□ 0.49
SNCAIP-203ENST00000379538 CABP2Q9NPB3 220 aa18.13■□□□□ 0.49
SNCAIP-203ENST00000379538 MYBBP1AQ9BQG0 1328 aaKnown RBP18.13■□□□□ 0.49
SNCAIP-203ENST00000379538 ASXL1Q8IXJ9 1541 aa18.13■□□□□ 0.49
SNCAIP-203ENST00000379538 METP08581 1390 aa18.13■□□□□ 0.49
SNCAIP-203ENST00000379538 RIMS1Q86UR5 1692 aaKnown RBP18.13■□□□□ 0.49
SNCAIP-203ENST00000379538 POLR1AO95602 1720 aaPredicted RBP18.12■□□□□ 0.49
SNCAIP-203ENST00000379538 SLC12A5Q9H2X9 1139 aa18.12■□□□□ 0.49
SNCAIP-203ENST00000379538 PER1O15534 1290 aaPredicted RBP18.11■□□□□ 0.49
SNCAIP-203ENST00000379538 EIF3AQ14152 1382 aaKnown RBP18.11■□□□□ 0.49
SNCAIP-203ENST00000379538 LAMC1P11047 1609 aa18.11■□□□□ 0.49
SNCAIP-203ENST00000379538 POGKQ9P215 609 aa18.11■□□□□ 0.49
SNCAIP-203ENST00000379538 PTPRMP28827 1452 aa18.1■□□□□ 0.49
SNCAIP-203ENST00000379538 TMEM2Q9UHN6 1383 aa18.1■□□□□ 0.49
SNCAIP-203ENST00000379538 PLEKHH1Q9ULM0 1364 aa18.1■□□□□ 0.49
SNCAIP-203ENST00000379538 ZFYVE9O95405 1425 aa18.1■□□□□ 0.49
SNCAIP-203ENST00000379538 ZNF142P52746 1687 aaPredicted RBP18.09■□□□□ 0.49
SNCAIP-203ENST00000379538 NLRP1Q9C000 1473 aa18.08■□□□□ 0.49
SNCAIP-203ENST00000379538 ALKQ9UM73 1620 aa18.08■□□□□ 0.48
SNCAIP-203ENST00000379538 RBM33Q96EV2 1170 aaKnown RBP18.08■□□□□ 0.48
SNCAIP-203ENST00000379538 DAXXQ9UER7 740 aaPredicted RBP18.08■□□□□ 0.48
SNCAIP-203ENST00000379538 BRD4O60885 1362 aaPredicted RBP18.08■□□□□ 0.48
SNCAIP-203ENST00000379538 UBE2Q2Q8WVN8 375 aa18.07■□□□□ 0.48
SNCAIP-203ENST00000379538 KIAA1210Q9ULL0 1709 aa18.07■□□□□ 0.48
SNCAIP-203ENST00000379538 YTHDC2Q9H6S0 1430 aaKnown RBP18.07■□□□□ 0.48
SNCAIP-203ENST00000379538 NUTM2FA1L443 756 aa18.07■□□□□ 0.48
SNCAIP-203ENST00000379538 DDRGK1Q96HY6 314 aa18.07■□□□□ 0.48
SNCAIP-203ENST00000379538 RGS3P49796 1198 aa18.06■□□□□ 0.48
SNCAIP-203ENST00000379538 SRPK2P78362 688 aaKnown RBP18.05■□□□□ 0.48
SNCAIP-203ENST00000379538 CARD14Q9BXL6 1004 aa18.05■□□□□ 0.48
SNCAIP-203ENST00000379538 NCKAP5LQ9HCH0 1330 aa18.05■□□□□ 0.48
SNCAIP-203ENST00000379538 RALBP1Q15311 655 aa18.05■□□□□ 0.48
SNCAIP-203ENST00000379538 UBR1Q8IWV7 1749 aa18.05■□□□□ 0.48
SNCAIP-203ENST00000379538 SETD1BQ9UPS6 1966 aaKnown RBP18.04■□□□□ 0.48
SNCAIP-203ENST00000379538 MYO3AQ8NEV4 1616 aa18.03■□□□□ 0.48
SNCAIP-203ENST00000379538 SETBP1Q9Y6X0 1596 aa18.03■□□□□ 0.48
SNCAIP-203ENST00000379538 NLRP13Q86W25 1043 aa18.03■□□□□ 0.48
SNCAIP-203ENST00000379538 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.03■□□□□ 0.48
SNCAIP-203ENST00000379538 C8orf34Q49A92 452 aa18.02■□□□□ 0.47
SNCAIP-203ENST00000379538 EID1Q9Y6B2 187 aa18.02■□□□□ 0.47
SNCAIP-203ENST00000379538 TNNT2P45379 298 aaPredicted RBP18.01■□□□□ 0.47
SNCAIP-203ENST00000379538 THEMISQ8N1K5 641 aaPredicted RBP18.01■□□□□ 0.47
SNCAIP-203ENST00000379538 KNSTRNQ9Y448 316 aa18.01■□□□□ 0.47
SNCAIP-203ENST00000379538 NRXN3Q9Y4C0 1643 aa18■□□□□ 0.47
SNCAIP-203ENST00000379538 QRICH2Q9H0J4 1663 aa18■□□□□ 0.47
SNCAIP-203ENST00000379538 ARXQ96QS3 562 aa17.99■□□□□ 0.47
SNCAIP-203ENST00000379538 CDCA8Q53HL2 280 aa17.99■□□□□ 0.47
SNCAIP-203ENST00000379538 ARHGEF28Q8N1W1 1705 aaKnown RBP17.99■□□□□ 0.47
SNCAIP-203ENST00000379538 HDGFP51858 240 aaKnown RBP17.98■□□□□ 0.47
SNCAIP-203ENST00000379538 PDE3BQ13370 1112 aa17.98■□□□□ 0.47
SNCAIP-203ENST00000379538 CDK19Q9BWU1 502 aa17.98■□□□□ 0.47
SNCAIP-203ENST00000379538 ADAMTS13Q76LX8 1427 aa17.98■□□□□ 0.47
SNCAIP-203ENST00000379538 KDM2BQ8NHM5 1336 aa17.98■□□□□ 0.47
SNCAIP-203ENST00000379538 EVC2Q86UK5 1308 aa17.97■□□□□ 0.47
SNCAIP-203ENST00000379538 TULP4Q9NRJ4 1543 aa17.97■□□□□ 0.47
SNCAIP-203ENST00000379538 AMER1Q5JTC6 1135 aaPredicted RBP17.97■□□□□ 0.47
SNCAIP-203ENST00000379538 KTN1Q86UP2 1357 aaKnown RBP17.96■□□□□ 0.47
SNCAIP-203ENST00000379538 ROBO2Q9HCK4 1378 aa17.96■□□□□ 0.47
SNCAIP-203ENST00000379538 HSPA2P54652 639 aa17.96■□□□□ 0.47
SNCAIP-203ENST00000379538 FAM161AQ3B820 660 aa17.95■□□□□ 0.46
SNCAIP-203ENST00000379538 AMOTL2Q9Y2J4 779 aa17.95■□□□□ 0.46
SNCAIP-203ENST00000379538 CABP1Q9NZU7 370 aa17.94■□□□□ 0.46
SNCAIP-203ENST00000379538 ADAMTS8Q9UP79 889 aa17.94■□□□□ 0.46
SNCAIP-203ENST00000379538 PTPRUQ92729 1446 aa17.94■□□□□ 0.46
SNCAIP-203ENST00000379538 SLIT1O75093 1534 aa17.94■□□□□ 0.46
SNCAIP-203ENST00000379538 CEP170BQ9Y4F5 1589 aaPredicted RBP17.94■□□□□ 0.46
SNCAIP-203ENST00000379538 MYOM1P52179 1685 aa17.94■□□□□ 0.46
SNCAIP-203ENST00000379538 PARD3Q8TEW0 1356 aa17.93■□□□□ 0.46
SNCAIP-203ENST00000379538 SBNO2Q9Y2G9 1366 aa17.92■□□□□ 0.46
SNCAIP-203ENST00000379538 SETD1AO15047 1707 aaKnown RBP17.92■□□□□ 0.46
SNCAIP-203ENST00000379538 ARHGAP23Q9P227 1491 aa17.92■□□□□ 0.46
SNCAIP-203ENST00000379538 PLEKHG1Q9ULL1 1385 aa17.92■□□□□ 0.46
SNCAIP-203ENST00000379538 KDM4FA0A1W2PPD8 638 aa17.91■□□□□ 0.46
SNCAIP-203ENST00000379538 KCNA6P17658 529 aa17.91■□□□□ 0.46
SNCAIP-203ENST00000379538 SLKQ9H2G2 1235 aaPredicted RBP17.91■□□□□ 0.46
SNCAIP-203ENST00000379538 ABCC11Q96J66 1382 aa17.91■□□□□ 0.46
SNCAIP-203ENST00000379538 FBLN1P23142 703 aa17.9■□□□□ 0.46
SNCAIP-203ENST00000379538 SEC24BO95487 1268 aa17.9■□□□□ 0.46
SNCAIP-203ENST00000379538 CENPQQ7L2Z9 268 aaPredicted RBP17.89■□□□□ 0.46
SNCAIP-203ENST00000379538 NSD3Q9BZ95 1437 aa17.89■□□□□ 0.46
SNCAIP-203ENST00000379538 ANKLE2Q86XL3 938 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms