RNA–Protein interactions for RNA: ENST00000376990.8

GFAP-202, Transcript of glial fibrillary acidic protein, humanhuman

TSL 2

Gene GFAP, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-202ENST00000376990 SHPRHQ149N8 1683 aa25.74■■□□□ 1.71
GFAP-202ENST00000376990 NHSL1Q5SYE7 1610 aa25.74■■□□□ 1.71
GFAP-202ENST00000376990 ABCC11Q96J66 1382 aa25.73■■□□□ 1.71
GFAP-202ENST00000376990 ESCO1Q5FWF5 840 aa25.73■■□□□ 1.71
GFAP-202ENST00000376990 LRP6O75581 1613 aa25.72■■□□□ 1.71
GFAP-202ENST00000376990 YTHDC2Q9H6S0 1430 aaKnown RBP25.71■■□□□ 1.71
GFAP-202ENST00000376990 DCAF11Q8TEB1 546 aa25.71■■□□□ 1.71
GFAP-202ENST00000376990 DHX57Q6P158 1386 aaKnown RBP25.7■■□□□ 1.71
GFAP-202ENST00000376990 PLEKHH1Q9ULM0 1364 aa25.7■■□□□ 1.71
GFAP-202ENST00000376990 TECPR2O15040 1411 aa25.67■■□□□ 1.7
GFAP-202ENST00000376990 SAFB2Q14151 953 aaKnown RBP eCLIP25.67■■□□□ 1.7
GFAP-202ENST00000376990 ZNF772Q68DY9 489 aaPredicted RBP25.67■■□□□ 1.7
GFAP-202ENST00000376990 MYOM2P54296 1465 aa25.66■■□□□ 1.7
GFAP-202ENST00000376990 NRXN1Q9ULB1 1477 aa25.65■■□□□ 1.7
GFAP-202ENST00000376990 KNDC1Q76NI1 1749 aa25.64■■□□□ 1.7
GFAP-202ENST00000376990 SIRT1Q96EB6 747 aa25.64■■□□□ 1.7
GFAP-202ENST00000376990 POGKQ9P215 609 aa25.64■■□□□ 1.7
GFAP-202ENST00000376990 SOS2Q07890 1332 aaPredicted RBP25.63■■□□□ 1.69
GFAP-202ENST00000376990 FOXO3O43524 673 aa25.63■■□□□ 1.69
GFAP-202ENST00000376990 PRAM1Q96QH2 718 aa25.63■■□□□ 1.69
GFAP-202ENST00000376990 PNPLA6Q8IY17 1366 aa25.63■■□□□ 1.69
GFAP-202ENST00000376990 CDC42BPGQ6DT37 1551 aa25.62■■□□□ 1.69
GFAP-202ENST00000376990 ADAMTS2O95450 1211 aa25.62■■□□□ 1.69
GFAP-202ENST00000376990 XPCQ01831 940 aaPredicted RBP25.62■■□□□ 1.69
GFAP-202ENST00000376990 C8orf37Q96NL8 207 aa25.62■■□□□ 1.69
GFAP-202ENST00000376990 LAMC1P11047 1609 aa25.61■■□□□ 1.69
GFAP-202ENST00000376990 NPHP3Q7Z494 1330 aa25.61■■□□□ 1.69
GFAP-202ENST00000376990 TRAK1Q9UPV9 953 aa25.6■■□□□ 1.69
GFAP-202ENST00000376990 AFF2P51816 1311 aa25.6■■□□□ 1.69
GFAP-202ENST00000376990 NGLY1Q96IV0 654 aa25.57■■□□□ 1.68
GFAP-202ENST00000376990 STAC3Q96MF2 364 aa25.56■■□□□ 1.68
GFAP-202ENST00000376990 RXRBP28702 533 aa25.55■■□□□ 1.68
GFAP-202ENST00000376990 FMN2Q9NZ56 1722 aa25.53■■□□□ 1.68
GFAP-202ENST00000376990 HIRIP3Q9BW71 556 aaPredicted RBP25.52■■□□□ 1.68
GFAP-202ENST00000376990 QTRT2Q9H974 415 aaKnown RBP25.52■■□□□ 1.68
GFAP-202ENST00000376990 KRT28Q7Z3Y7 464 aa25.51■■□□□ 1.67
GFAP-202ENST00000376990 RGPD8O14715 1765 aaPredicted RBP25.5■■□□□ 1.67
GFAP-202ENST00000376990 MINK1Q8N4C8 1332 aaPredicted RBP25.5■■□□□ 1.67
GFAP-202ENST00000376990 PHF8Q9UPP1 1060 aa25.5■■□□□ 1.67
GFAP-202ENST00000376990 PXDNQ92626 1479 aa25.48■■□□□ 1.67
GFAP-202ENST00000376990 ADGRB1O14514 1584 aa25.48■■□□□ 1.67
GFAP-202ENST00000376990 DLC1Q96QB1 1528 aa25.47■■□□□ 1.67
GFAP-202ENST00000376990 PLEKHG5O94827 1062 aa25.47■■□□□ 1.67
GFAP-202ENST00000376990 PSME1Q06323 249 aa25.46■■□□□ 1.67
GFAP-202ENST00000376990 PMFBP1Q8TBY8 1022 aa25.46■■□□□ 1.67
GFAP-202ENST00000376990 USP21Q9UK80 565 aa25.45■■□□□ 1.66
GFAP-202ENST00000376990 LMOD2Q6P5Q4 547 aa25.44■■□□□ 1.66
GFAP-202ENST00000376990 KIF1AQ12756 1690 aa25.43■■□□□ 1.66
GFAP-202ENST00000376990 SPATA31A3Q5VYP0 1347 aa25.42■■□□□ 1.66
GFAP-202ENST00000376990 RBM6P78332 1123 aaKnown RBP25.42■■□□□ 1.66
GFAP-202ENST00000376990 COL22A1Q8NFW1 1626 aaPredicted RBP25.41■■□□□ 1.66
GFAP-202ENST00000376990 HAP1P54257 671 aaPredicted RBP25.4■■□□□ 1.66
GFAP-202ENST00000376990 WASLO00401 505 aaPredicted RBP25.39■■□□□ 1.66
GFAP-202ENST00000376990 NEUROD1Q13562 356 aa25.38■■□□□ 1.65
GFAP-202ENST00000376990 SIN3AQ96ST3 1273 aa25.38■■□□□ 1.65
GFAP-202ENST00000376990 NBPF1Q3BBV0 1214 aa25.37■■□□□ 1.65
GFAP-202ENST00000376990 FNBP4Q8N3X1 1017 aaPredicted RBP25.37■■□□□ 1.65
GFAP-202ENST00000376990 TRPC5Q9UL62 973 aaPredicted RBP25.37■■□□□ 1.65
GFAP-202ENST00000376990 CABLES1Q8TDN4 633 aa25.35■■□□□ 1.65
GFAP-202ENST00000376990 ANKARQ7Z5J8 1434 aa25.35■■□□□ 1.65
GFAP-202ENST00000376990 EIF3AQ14152 1382 aaKnown RBP25.34■■□□□ 1.65
GFAP-202ENST00000376990 PRR36Q9H6K5 1346 aa25.34■■□□□ 1.65
GFAP-202ENST00000376990 USP32Q8NFA0 1604 aa25.34■■□□□ 1.65
GFAP-202ENST00000376990 ADGRB2O60241 1585 aa25.33■■□□□ 1.65
GFAP-202ENST00000376990 NGDNQ8NEJ9 315 aaKnown RBP25.33■■□□□ 1.65
GFAP-202ENST00000376990 L3MBTL2Q969R5 705 aa25.33■■□□□ 1.65
GFAP-202ENST00000376990 CDK12Q9NYV4 1490 aaPredicted RBP25.32■■□□□ 1.64
GFAP-202ENST00000376990 ARHGEF28Q8N1W1 1705 aaKnown RBP25.32■■□□□ 1.64
GFAP-202ENST00000376990 TNS3Q68CZ2 1445 aa25.31■■□□□ 1.64
GFAP-202ENST00000376990 UPF1Q92900 1129 aaKnown RBP eCLIP25.31■■□□□ 1.64
GFAP-202ENST00000376990 CDK19Q9BWU1 502 aa25.31■■□□□ 1.64
GFAP-202ENST00000376990 SBNO1A3KN83 1393 aa25.31■■□□□ 1.64
GFAP-202ENST00000376990 GPRASP1Q5JY77 1395 aa25.31■■□□□ 1.64
GFAP-202ENST00000376990 MARF1Q9Y4F3 1742 aaKnown RBP25.3■■□□□ 1.64
GFAP-202ENST00000376990 NUDT16Q96DE0 195 aaKnown RBP25.3■■□□□ 1.64
GFAP-202ENST00000376990 PAK3O75914 559 aaPredicted RBP25.29■■□□□ 1.64
GFAP-202ENST00000376990 TULP4Q9NRJ4 1543 aa25.28■■□□□ 1.64
GFAP-202ENST00000376990 KIAA1210Q9ULL0 1709 aa25.28■■□□□ 1.64
GFAP-202ENST00000376990 ARHGEF10O15013 1369 aa25.27■■□□□ 1.64
GFAP-202ENST00000376990 RGS12O14924 1447 aa25.27■■□□□ 1.64
GFAP-202ENST00000376990 ATRNO75882 1429 aa25.25■■□□□ 1.63
GFAP-202ENST00000376990 BCL9LQ86UU0 1499 aa25.25■■□□□ 1.63
GFAP-202ENST00000376990 UNC5CLQ8IV45 518 aa25.24■■□□□ 1.63
GFAP-202ENST00000376990 GJD4Q96KN9 370 aaPredicted RBP25.23■■□□□ 1.63
GFAP-202ENST00000376990 SRPK2P78362 688 aaKnown RBP25.21■■□□□ 1.63
GFAP-202ENST00000376990 CENPJQ9HC77 1338 aaPredicted RBP25.2■■□□□ 1.62
GFAP-202ENST00000376990 CCDC9Q9Y3X0 531 aaKnown RBP25.2■■□□□ 1.62
GFAP-202ENST00000376990 CCDC61Q9Y6R9 512 aa25.19■■□□□ 1.62
GFAP-202ENST00000376990 FAM83GA6ND36 823 aa25.18■■□□□ 1.62
GFAP-202ENST00000376990 ITSN1Q15811 1721 aa25.17■■□□□ 1.62
GFAP-202ENST00000376990 TRPM3Q9HCF6 1732 aaPredicted RBP25.17■■□□□ 1.62
GFAP-202ENST00000376990 ATP7BP35670 1465 aa25.17■■□□□ 1.62
GFAP-202ENST00000376990 SLIT2O94813 1529 aa25.17■■□□□ 1.62
GFAP-202ENST00000376990 ACEP12821 1306 aa25.16■■□□□ 1.62
GFAP-202ENST00000376990 CABP2Q9NPB3 220 aa25.16■■□□□ 1.62
GFAP-202ENST00000376990 TRIM26Q12899 539 aaPredicted RBP25.15■■□□□ 1.62
GFAP-202ENST00000376990 NBPF8Q3BBV2 869 aa25.15■■□□□ 1.62
GFAP-202ENST00000376990 NUTM2GQ5VZR2 741 aa25.15■■□□□ 1.62
GFAP-202ENST00000376990 ALS2Q96Q42 1657 aa25.13■■□□□ 1.61
GFAP-202ENST00000376990 ABCA3Q99758 1704 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms