RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 TMEM132EQ6IEE7 984 aa17.07■□□□□ 0.32
ACTN1-202ENST00000376839 SETBP1Q9Y6X0 1596 aa17.07■□□□□ 0.32
ACTN1-202ENST00000376839 USP19O94966 1318 aa17.06■□□□□ 0.32
ACTN1-202ENST00000376839 IQSEC2Q5JU85 1478 aa17.06■□□□□ 0.32
ACTN1-202ENST00000376839 TCP11L2Q8N4U5 519 aa17.06■□□□□ 0.32
ACTN1-202ENST00000376839 RUNDC1Q96C34 613 aa17.06■□□□□ 0.32
ACTN1-202ENST00000376839 LMTK2Q8IWU2 1503 aa17.06■□□□□ 0.32
ACTN1-202ENST00000376839 TNNQ9UQP3 1299 aa17.06■□□□□ 0.32
ACTN1-202ENST00000376839 NINLQ9Y2I6 1382 aa17.05■□□□□ 0.32
ACTN1-202ENST00000376839 ZC3H13Q5T200 1668 aaKnown RBP17.05■□□□□ 0.32
ACTN1-202ENST00000376839 QRICH2Q9H0J4 1663 aa17.05■□□□□ 0.32
ACTN1-202ENST00000376839 GSE1Q14687 1217 aa17.05■□□□□ 0.32
ACTN1-202ENST00000376839 CFAP65Q6ZU64 1925 aaKnown RBP17.05■□□□□ 0.32
ACTN1-202ENST00000376839 SEC24BO95487 1268 aa17.05■□□□□ 0.32
ACTN1-202ENST00000376839 RARSP54136 660 aaKnown RBP17.05■□□□□ 0.32
ACTN1-202ENST00000376839 ADGRB1O14514 1584 aa17.04■□□□□ 0.32
ACTN1-202ENST00000376839 VIRMAQ69YN4 1812 aaKnown RBP17.04■□□□□ 0.32
ACTN1-202ENST00000376839 C14orf93Q9H972 538 aaKnown RBP17.04■□□□□ 0.32
ACTN1-202ENST00000376839 ASXL2Q76L83 1435 aa17.04■□□□□ 0.32
ACTN1-202ENST00000376839 RTN4Q9NQC3 1192 aaKnown RBP17.04■□□□□ 0.32
ACTN1-202ENST00000376839 NPATQ14207 1427 aa17.04■□□□□ 0.32
ACTN1-202ENST00000376839 RLBP1P12271 317 aa17.03■□□□□ 0.32
ACTN1-202ENST00000376839 MTHFSP49914 203 aa17.03■□□□□ 0.32
ACTN1-202ENST00000376839 PHF23Q9BUL5 403 aaPredicted RBP17.03■□□□□ 0.32
ACTN1-202ENST00000376839 BCL2L13Q9BXK5 485 aa17.03■□□□□ 0.32
ACTN1-202ENST00000376839 PPLO60437 1756 aa17.02■□□□□ 0.32
ACTN1-202ENST00000376839 FRAT2O75474 233 aaPredicted RBP17.02■□□□□ 0.32
ACTN1-202ENST00000376839 ZNF518AQ6AHZ1 1483 aa17.01■□□□□ 0.31
ACTN1-202ENST00000376839 MAPK8IP3Q9UPT6 1336 aa17.01■□□□□ 0.31
ACTN1-202ENST00000376839 PCDHB15Q9Y5E8 787 aa17.01■□□□□ 0.31
ACTN1-202ENST00000376839 GGT6Q6P531 493 aa17.01■□□□□ 0.31
ACTN1-202ENST00000376839 NUTM2DQ5VT03 806 aaPredicted RBP16.99■□□□□ 0.31
ACTN1-202ENST00000376839 WDR63Q8IWG1 891 aa16.99■□□□□ 0.31
ACTN1-202ENST00000376839 FRMPD1Q5SYB0 1578 aa16.99■□□□□ 0.31
ACTN1-202ENST00000376839 BRPF3Q9ULD4 1205 aa16.98■□□□□ 0.31
ACTN1-202ENST00000376839 USP32Q8NFA0 1604 aa16.98■□□□□ 0.31
ACTN1-202ENST00000376839 NLRP1Q9C000 1473 aa16.97■□□□□ 0.31
ACTN1-202ENST00000376839 CFAP53Q96M91 514 aa16.96■□□□□ 0.31
ACTN1-202ENST00000376839 CCDC27Q2M243 656 aa16.96■□□□□ 0.3
ACTN1-202ENST00000376839 PMFBP1Q8TBY8 1022 aa16.96■□□□□ 0.3
ACTN1-202ENST00000376839 TULP4Q9NRJ4 1543 aa16.95■□□□□ 0.3
ACTN1-202ENST00000376839 GLI2P10070 1586 aa16.95■□□□□ 0.3
ACTN1-202ENST00000376839 U2AF1L5P0DN76 240 aaPredicted RBP16.95■□□□□ 0.3
ACTN1-202ENST00000376839 U2AF1Q01081 240 aaKnown RBP eCLIP16.95■□□□□ 0.3
ACTN1-202ENST00000376839 PDZRN3Q9UPQ7 1066 aa16.94■□□□□ 0.3
ACTN1-202ENST00000376839 CABP2Q9NPB3 220 aa16.93■□□□□ 0.3
ACTN1-202ENST00000376839 ANKRD36BQ8N2N9 1353 aa16.93■□□□□ 0.3
ACTN1-202ENST00000376839 POGZQ7Z3K3 1410 aa16.93■□□□□ 0.3
ACTN1-202ENST00000376839 HECW2Q9P2P5 1572 aa16.93■□□□□ 0.3
ACTN1-202ENST00000376839 RPGRIP1LQ68CZ1 1315 aa16.93■□□□□ 0.3
ACTN1-202ENST00000376839 EVC2Q86UK5 1308 aa16.93■□□□□ 0.3
ACTN1-202ENST00000376839 ABCC3O15438 1527 aa16.93■□□□□ 0.3
ACTN1-202ENST00000376839 SAFB2Q14151 953 aaKnown RBP eCLIP16.92■□□□□ 0.3
ACTN1-202ENST00000376839 ARHGEF28Q8N1W1 1705 aaKnown RBP16.92■□□□□ 0.3
ACTN1-202ENST00000376839 MYH16Q9H6N6 1097 aa16.92■□□□□ 0.3
ACTN1-202ENST00000376839 AAMPQ13685 434 aa16.91■□□□□ 0.3
ACTN1-202ENST00000376839 TSR2Q969E8 191 aaKnown RBP16.91■□□□□ 0.3
ACTN1-202ENST00000376839 SENP3Q9H4L4 574 aaPredicted RBP16.91■□□□□ 0.3
ACTN1-202ENST00000376839 SIGLEC1Q9BZZ2 1709 aa16.91■□□□□ 0.3
ACTN1-202ENST00000376839 ADGRB2O60241 1585 aa16.9■□□□□ 0.3
ACTN1-202ENST00000376839 MLH3Q9UHC1 1453 aa16.9■□□□□ 0.3
ACTN1-202ENST00000376839 SLKQ9H2G2 1235 aaPredicted RBP16.9■□□□□ 0.3
ACTN1-202ENST00000376839 MVPQ14764 893 aaKnown RBP16.89■□□□□ 0.29
ACTN1-202ENST00000376839 NSD2O96028 1365 aa16.89■□□□□ 0.29
ACTN1-202ENST00000376839 NEXMIFQ5QGS0 1516 aa16.89■□□□□ 0.29
ACTN1-202ENST00000376839 CAMSAP1Q5T5Y3 1602 aa16.88■□□□□ 0.29
ACTN1-202ENST00000376839 BECN1Q14457 450 aa16.88■□□□□ 0.29
ACTN1-202ENST00000376839 RWDD1Q9H446 243 aaPredicted RBP16.88■□□□□ 0.29
ACTN1-202ENST00000376839 CD109Q6YHK3 1445 aa16.88■□□□□ 0.29
ACTN1-202ENST00000376839 TBC1D32Q96NH3 1257 aa16.88■□□□□ 0.29
ACTN1-202ENST00000376839 PUS7Q96PZ0 661 aaKnown RBP16.88■□□□□ 0.29
ACTN1-202ENST00000376839 A0A1W2PP64 1363 aa16.87■□□□□ 0.29
ACTN1-202ENST00000376839 ZKSCAN2Q63HK3 967 aa16.87■□□□□ 0.29
ACTN1-202ENST00000376839 VGFO15240 615 aaPredicted RBP16.87■□□□□ 0.29
ACTN1-202ENST00000376839 FTSJ3Q8IY81 847 aaKnown RBP16.87■□□□□ 0.29
ACTN1-202ENST00000376839 GGNBP2Q9H3C7 697 aa16.87■□□□□ 0.29
ACTN1-202ENST00000376839 U2SURPO15042 1029 aaKnown RBP16.86■□□□□ 0.29
ACTN1-202ENST00000376839 DZIP1LQ8IYY4 767 aaKnown RBP16.86■□□□□ 0.29
ACTN1-202ENST00000376839 ANO8Q9HCE9 1232 aaPredicted RBP16.86■□□□□ 0.29
ACTN1-202ENST00000376839 ZMYM3Q14202 1370 aa16.86■□□□□ 0.29
ACTN1-202ENST00000376839 EXOSC9Q06265 439 aaKnown RBP16.86■□□□□ 0.29
ACTN1-202ENST00000376839 NCBP3Q53F19 620 aaKnown RBP16.86■□□□□ 0.29
ACTN1-202ENST00000376839 PLEKHF1Q96S99 279 aa16.86■□□□□ 0.29
ACTN1-202ENST00000376839 STK26Q9P289 416 aa16.86■□□□□ 0.29
ACTN1-202ENST00000376839 PIK3C2BO00750 1634 aa16.86■□□□□ 0.29
ACTN1-202ENST00000376839 ABCC11Q96J66 1382 aa16.85■□□□□ 0.29
ACTN1-202ENST00000376839 UPF2Q9HAU5 1272 aaKnown RBP16.85■□□□□ 0.29
ACTN1-202ENST00000376839 SMC4Q9NTJ3 1288 aa16.85■□□□□ 0.29
ACTN1-202ENST00000376839 ANTXR1Q9H6X2 564 aa16.84■□□□□ 0.29
ACTN1-202ENST00000376839 TRIM35Q9UPQ4 493 aa16.84■□□□□ 0.29
ACTN1-202ENST00000376839 TMPOP42166 694 aaKnown RBP16.84■□□□□ 0.29
ACTN1-202ENST00000376839 TBC1D2Q9BYX2 928 aa16.84■□□□□ 0.29
ACTN1-202ENST00000376839 POGKQ9P215 609 aa16.84■□□□□ 0.29
ACTN1-202ENST00000376839 RAPGEF3O95398 923 aa16.83■□□□□ 0.29
ACTN1-202ENST00000376839 TRIM27P14373 513 aa16.83■□□□□ 0.29
ACTN1-202ENST00000376839 SRPK2P78362 688 aaKnown RBP16.83■□□□□ 0.29
ACTN1-202ENST00000376839 CFAP74Q9C0B2 1584 aa16.83■□□□□ 0.29
ACTN1-202ENST00000376839 COL3A1P02461 1466 aaPredicted RBP16.83■□□□□ 0.28
ACTN1-202ENST00000376839 NPM1P06748 294 aaKnown RBP eCLIP16.83■□□□□ 0.28
ACTN1-202ENST00000376839 SSH1Q8WYL5 1049 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms