RNA–Protein interactions for RNA: ENST00000376324.7

CHRDL2-202, Transcript of chordin like 2, humanhuman

TSL 1 (best)

Gene CHRDL2, Length 1,665 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-202ENST00000376324 SBNO2Q9Y2G9 1366 aa20.54■□□□□ 0.88
CHRDL2-202ENST00000376324 SLC24A1O60721 1099 aa20.52■□□□□ 0.88
CHRDL2-202ENST00000376324 PTCH1Q13635 1447 aa20.51■□□□□ 0.87
CHRDL2-202ENST00000376324 EVC2Q86UK5 1308 aa20.51■□□□□ 0.87
CHRDL2-202ENST00000376324 RBM33Q96EV2 1170 aaKnown RBP20.51■□□□□ 0.87
CHRDL2-202ENST00000376324 CDCA8Q53HL2 280 aa20.5■□□□□ 0.87
CHRDL2-202ENST00000376324 DIEXFQ68CQ4 756 aaKnown RBP20.5■□□□□ 0.87
CHRDL2-202ENST00000376324 TULP4Q9NRJ4 1543 aa20.49■□□□□ 0.87
CHRDL2-202ENST00000376324 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.49■□□□□ 0.87
CHRDL2-202ENST00000376324 NWD1Q149M9 1564 aa20.48■□□□□ 0.87
CHRDL2-202ENST00000376324 SRPK2P78362 688 aaKnown RBP20.48■□□□□ 0.87
CHRDL2-202ENST00000376324 CABP2Q9NPB3 220 aa20.48■□□□□ 0.87
CHRDL2-202ENST00000376324 CDK19Q9BWU1 502 aa20.47■□□□□ 0.87
CHRDL2-202ENST00000376324 DMRT2Q9Y5R5 561 aa20.47■□□□□ 0.87
CHRDL2-202ENST00000376324 PROSER2Q86WR7 435 aaPredicted RBP20.46■□□□□ 0.87
CHRDL2-202ENST00000376324 STRCP1A6NGW2 1772 aa20.46■□□□□ 0.87
CHRDL2-202ENST00000376324 ZNF335Q9H4Z2 1342 aaPredicted RBP20.44■□□□□ 0.86
CHRDL2-202ENST00000376324 WASLO00401 505 aaPredicted RBP20.43■□□□□ 0.86
CHRDL2-202ENST00000376324 C14orf37Q86TY3 774 aa20.43■□□□□ 0.86
CHRDL2-202ENST00000376324 TMC1Q8TDI8 760 aa20.42■□□□□ 0.86
CHRDL2-202ENST00000376324 NKTRP30414 1462 aaKnown RBP20.41■□□□□ 0.86
CHRDL2-202ENST00000376324 NUTM2FA1L443 756 aa20.4■□□□□ 0.86
CHRDL2-202ENST00000376324 ADGRB2O60241 1585 aa20.4■□□□□ 0.86
CHRDL2-202ENST00000376324 MYOM1P52179 1685 aa20.39■□□□□ 0.85
CHRDL2-202ENST00000376324 NALCNQ8IZF0 1738 aa20.39■□□□□ 0.85
CHRDL2-202ENST00000376324 PUS7Q96PZ0 661 aaKnown RBP20.37■□□□□ 0.85
CHRDL2-202ENST00000376324 SLC12A5Q9H2X9 1139 aa20.37■□□□□ 0.85
CHRDL2-202ENST00000376324 PANK3Q9H999 370 aa20.37■□□□□ 0.85
CHRDL2-202ENST00000376324 TMEM94Q12767 1356 aa20.36■□□□□ 0.85
CHRDL2-202ENST00000376324 ATAD2Q6PL18 1390 aa20.36■□□□□ 0.85
CHRDL2-202ENST00000376324 ADGRL3Q9HAR2 1447 aa20.36■□□□□ 0.85
CHRDL2-202ENST00000376324 NUDT16Q96DE0 195 aaKnown RBP20.35■□□□□ 0.85
CHRDL2-202ENST00000376324 CNGB1Q14028 1251 aaPredicted RBP20.34■□□□□ 0.85
CHRDL2-202ENST00000376324 PRR36Q9H6K5 1346 aa20.33■□□□□ 0.85
CHRDL2-202ENST00000376324 CABP1Q9NZU7 370 aa20.32■□□□□ 0.84
CHRDL2-202ENST00000376324 LRRC7Q96NW7 1537 aa20.31■□□□□ 0.84
CHRDL2-202ENST00000376324 ATP7BP35670 1465 aa20.31■□□□□ 0.84
CHRDL2-202ENST00000376324 FMN2Q9NZ56 1722 aa20.31■□□□□ 0.84
CHRDL2-202ENST00000376324 CDC42BPGQ6DT37 1551 aa20.3■□□□□ 0.84
CHRDL2-202ENST00000376324 RGPD8O14715 1765 aaPredicted RBP20.3■□□□□ 0.84
CHRDL2-202ENST00000376324 PPIP5K1Q6PFW1 1433 aa20.3■□□□□ 0.84
CHRDL2-202ENST00000376324 C19orf44Q9H6X5 657 aa20.29■□□□□ 0.84
CHRDL2-202ENST00000376324 CCDC61Q9Y6R9 512 aa20.29■□□□□ 0.84
CHRDL2-202ENST00000376324 XIRP1Q702N8 1843 aaKnown RBP20.29■□□□□ 0.84
CHRDL2-202ENST00000376324 USP32Q8NFA0 1604 aa20.28■□□□□ 0.84
CHRDL2-202ENST00000376324 NINLQ9Y2I6 1382 aa20.27■□□□□ 0.84
CHRDL2-202ENST00000376324 NCOA3Q9Y6Q9 1424 aa20.26■□□□□ 0.83
CHRDL2-202ENST00000376324 MSH6P52701 1360 aa20.26■□□□□ 0.83
CHRDL2-202ENST00000376324 ANP32CO43423 234 aa20.26■□□□□ 0.83
CHRDL2-202ENST00000376324 ATF3P18847 181 aa20.26■□□□□ 0.83
CHRDL2-202ENST00000376324 MIER1Q8N108 512 aa20.26■□□□□ 0.83
CHRDL2-202ENST00000376324 CARD14Q9BXL6 1004 aa20.26■□□□□ 0.83
CHRDL2-202ENST00000376324 TERF2IPQ9NYB0 399 aa20.26■□□□□ 0.83
CHRDL2-202ENST00000376324 KNSTRNQ9Y448 316 aa20.26■□□□□ 0.83
CHRDL2-202ENST00000376324 ANKRD36BQ8N2N9 1353 aa20.25■□□□□ 0.83
CHRDL2-202ENST00000376324 PER1O15534 1290 aaPredicted RBP20.25■□□□□ 0.83
CHRDL2-202ENST00000376324 HDGFL2Q7Z4V5 671 aaPredicted RBP20.25■□□□□ 0.83
CHRDL2-202ENST00000376324 PMFBP1Q8TBY8 1022 aa20.25■□□□□ 0.83
CHRDL2-202ENST00000376324 TOPAZ1Q8N9V7 1692 aa20.24■□□□□ 0.83
CHRDL2-202ENST00000376324 A0A1W2PP64 1363 aa20.24■□□□□ 0.83
CHRDL2-202ENST00000376324 ANKARQ7Z5J8 1434 aa20.24■□□□□ 0.83
CHRDL2-202ENST00000376324 ITSN1Q15811 1721 aa20.24■□□□□ 0.83
CHRDL2-202ENST00000376324 NSD3Q9BZ95 1437 aa20.23■□□□□ 0.83
CHRDL2-202ENST00000376324 CD163L1Q9NR16 1453 aa20.23■□□□□ 0.83
CHRDL2-202ENST00000376324 ESCO1Q5FWF5 840 aa20.21■□□□□ 0.83
CHRDL2-202ENST00000376324 CC2D1BQ5T0F9 858 aaKnown RBP20.21■□□□□ 0.83
CHRDL2-202ENST00000376324 ACEP12821 1306 aa20.21■□□□□ 0.83
CHRDL2-202ENST00000376324 LTBP4Q8N2S1 1624 aa20.2■□□□□ 0.83
CHRDL2-202ENST00000376324 PLEKHG3A1L390 1219 aa20.2■□□□□ 0.82
CHRDL2-202ENST00000376324 CADPS2Q86UW7 1296 aa20.2■□□□□ 0.82
CHRDL2-202ENST00000376324 NGDNQ8NEJ9 315 aaKnown RBP20.2■□□□□ 0.82
CHRDL2-202ENST00000376324 KTN1Q86UP2 1357 aaKnown RBP20.19■□□□□ 0.82
CHRDL2-202ENST00000376324 DCCP43146 1447 aa20.19■□□□□ 0.82
CHRDL2-202ENST00000376324 ORAI2Q96SN7 254 aa20.19■□□□□ 0.82
CHRDL2-202ENST00000376324 PHF8Q9UPP1 1060 aa20.18■□□□□ 0.82
CHRDL2-202ENST00000376324 AKAP12Q02952 1782 aa20.18■□□□□ 0.82
CHRDL2-202ENST00000376324 C1orf167Q5SNV9 1468 aa20.17■□□□□ 0.82
CHRDL2-202ENST00000376324 MST1RQ04912 1400 aa20.17■□□□□ 0.82
CHRDL2-202ENST00000376324 CPSF1Q10570 1443 aaKnown RBP20.17■□□□□ 0.82
CHRDL2-202ENST00000376324 AMER1Q5JTC6 1135 aaPredicted RBP20.16■□□□□ 0.82
CHRDL2-202ENST00000376324 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.16■□□□□ 0.82
CHRDL2-202ENST00000376324 PRKRIP1Q9H875 184 aaPredicted RBP20.16■□□□□ 0.82
CHRDL2-202ENST00000376324 ZNF692Q9BU19 519 aaPredicted RBP20.15■□□□□ 0.82
CHRDL2-202ENST00000376324 CGNL1Q0VF96 1302 aa20.14■□□□□ 0.82
CHRDL2-202ENST00000376324 MON2Q7Z3U7 1717 aa20.14■□□□□ 0.81
CHRDL2-202ENST00000376324 POLR3AO14802 1390 aaPredicted RBP20.12■□□□□ 0.81
CHRDL2-202ENST00000376324 USP6P35125 1406 aa20.11■□□□□ 0.81
CHRDL2-202ENST00000376324 EDC4Q6P2E9 1401 aaKnown RBP20.11■□□□□ 0.81
CHRDL2-202ENST00000376324 FOXO3O43524 673 aa20.1■□□□□ 0.81
CHRDL2-202ENST00000376324 GGNBP2Q9H3C7 697 aa20.1■□□□□ 0.81
CHRDL2-202ENST00000376324 SLAIN2Q9P270 581 aa20.1■□□□□ 0.81
CHRDL2-202ENST00000376324 PSME1Q06323 249 aa20.1■□□□□ 0.81
CHRDL2-202ENST00000376324 NPC1L1Q9UHC9 1359 aa20.09■□□□□ 0.81
CHRDL2-202ENST00000376324 XPCQ01831 940 aaPredicted RBP20.09■□□□□ 0.81
CHRDL2-202ENST00000376324 RALBP1Q15311 655 aa20.09■□□□□ 0.81
CHRDL2-202ENST00000376324 NME9Q86XW9 330 aa20.09■□□□□ 0.81
CHRDL2-202ENST00000376324 KIF20BQ96Q89 1820 aa20.09■□□□□ 0.81
CHRDL2-202ENST00000376324 TTC21BQ7Z4L5 1316 aa20.08■□□□□ 0.81
CHRDL2-202ENST00000376324 FYB1O15117 783 aa20.08■□□□□ 0.81
CHRDL2-202ENST00000376324 KIF1AQ12756 1690 aa20.08■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms