RNA–Protein interactions for RNA: ENST00000376093.6

LST1-208, leukocyte specific transcript 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LST1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LST1-208ENST00000376093 SPRYD3Q8NCJ5 442 aa18.68■□□□□ 0.58
LST1-208ENST00000376093 MYOM3Q5VTT5 1437 aa18.67■□□□□ 0.58
LST1-208ENST00000376093 EMP3P54852 163 aa18.67■□□□□ 0.58
LST1-208ENST00000376093 RSPH4AQ5TD94 716 aa18.66■□□□□ 0.58
LST1-208ENST00000376093 PLPP6Q8IY26 295 aa18.65■□□□□ 0.58
LST1-208ENST00000376093 ZNF142P52746 1687 aaPredicted RBP18.65■□□□□ 0.58
LST1-208ENST00000376093 MAST1Q9Y2H9 1570 aa18.64■□□□□ 0.58
LST1-208ENST00000376093 KIF3BO15066 747 aa18.64■□□□□ 0.57
LST1-208ENST00000376093 TSPY4P0CV99 314 aa18.63■□□□□ 0.57
LST1-208ENST00000376093 TSPY10P0CW01 314 aa18.63■□□□□ 0.57
LST1-208ENST00000376093 PTPRKQ15262 1439 aa18.63■□□□□ 0.57
LST1-208ENST00000376093 MIA2Q96PC5 1412 aa18.63■□□□□ 0.57
LST1-208ENST00000376093 MED1Q15648 1581 aaPredicted RBP18.63■□□□□ 0.57
LST1-208ENST00000376093 POTEB3A0JP26 581 aa18.62■□□□□ 0.57
LST1-208ENST00000376093 POTEBQ6S5H4 581 aa18.62■□□□□ 0.57
LST1-208ENST00000376093 KDM5DQ9BY66 1539 aa18.62■□□□□ 0.57
LST1-208ENST00000376093 CEP170BQ9Y4F5 1589 aaPredicted RBP18.61■□□□□ 0.57
LST1-208ENST00000376093 CROCC2H7BZ55 1655 aa18.6■□□□□ 0.57
LST1-208ENST00000376093 PDE4AP27815 886 aa18.6■□□□□ 0.57
LST1-208ENST00000376093 ARSIQ5FYB1 569 aa18.6■□□□□ 0.57
LST1-208ENST00000376093 PAXIP1Q6ZW49 1069 aaPredicted RBP18.6■□□□□ 0.57
LST1-208ENST00000376093 PCDH10Q9P2E7 1040 aa18.6■□□□□ 0.57
LST1-208ENST00000376093 PTPN23Q9H3S7 1636 aa18.6■□□□□ 0.57
LST1-208ENST00000376093 PLA2R1Q13018 1463 aa18.59■□□□□ 0.57
LST1-208ENST00000376093 MFSD10Q14728 455 aa18.59■□□□□ 0.57
LST1-208ENST00000376093 KHSRPQ92945 711 aaKnown RBP eCLIP18.58■□□□□ 0.56
LST1-208ENST00000376093 RNF17Q9BXT8 1623 aaKnown RBP18.58■□□□□ 0.56
LST1-208ENST00000376093 FAM135AQ9P2D6 1515 aa18.58■□□□□ 0.56
LST1-208ENST00000376093 PPP1R15BQ5SWA1 713 aa18.57■□□□□ 0.56
LST1-208ENST00000376093 TCOF1Q13428 1488 aaKnown RBP18.57■□□□□ 0.56
LST1-208ENST00000376093 EIF2AK4Q9P2K8 1649 aaKnown RBP18.56■□□□□ 0.56
LST1-208ENST00000376093 HS3ST6Q96QI5 342 aa18.56■□□□□ 0.56
LST1-208ENST00000376093 PCDHGA4Q9Y5G9 962 aa18.56■□□□□ 0.56
LST1-208ENST00000376093 FAM205CA6NFA0 338 aa18.55■□□□□ 0.56
LST1-208ENST00000376093 HSPA1LP34931 641 aa18.55■□□□□ 0.56
LST1-208ENST00000376093 CDAN1Q8IWY9 1227 aa18.55■□□□□ 0.56
LST1-208ENST00000376093 PTCD2Q8WV60 388 aaKnown RBP18.55■□□□□ 0.56
LST1-208ENST00000376093 CFAP44Q96MT7 982 aa18.55■□□□□ 0.56
LST1-208ENST00000376093 WASHC2CQ9Y4E1 1318 aa18.54■□□□□ 0.56
LST1-208ENST00000376093 ZC3H13Q5T200 1668 aaKnown RBP18.54■□□□□ 0.56
LST1-208ENST00000376093 PZPP20742 1482 aa18.54■□□□□ 0.56
LST1-208ENST00000376093 PIP4K2BP78356 416 aa18.54■□□□□ 0.56
LST1-208ENST00000376093 DNMT1P26358 1616 aaKnown RBP18.52■□□□□ 0.56
LST1-208ENST00000376093 CEP152O94986 1710 aa18.52■□□□□ 0.56
LST1-208ENST00000376093 FGD6Q6ZV73 1430 aa18.52■□□□□ 0.56
LST1-208ENST00000376093 FBXO31Q5XUX0 539 aaPredicted RBP18.52■□□□□ 0.56
LST1-208ENST00000376093 LARP6Q9BRS8 491 aaKnown RBP18.52■□□□□ 0.56
LST1-208ENST00000376093 MROH1Q8NDA8 1641 aa18.52■□□□□ 0.55
LST1-208ENST00000376093 A2ML1A8K2U0 1454 aa18.52■□□□□ 0.55
LST1-208ENST00000376093 ABCC3O15438 1527 aa18.51■□□□□ 0.55
LST1-208ENST00000376093 DUOX2Q9NRD8 1548 aa18.51■□□□□ 0.55
LST1-208ENST00000376093 TNRQ92752 1358 aa18.51■□□□□ 0.55
LST1-208ENST00000376093 SHANK2Q9UPX8 1470 aa18.51■□□□□ 0.55
LST1-208ENST00000376093 ABCC5O15440 1437 aa18.5■□□□□ 0.55
LST1-208ENST00000376093 DDX27Q96GQ7 796 aaKnown RBP18.5■□□□□ 0.55
LST1-208ENST00000376093 DAPK1P53355 1430 aa18.49■□□□□ 0.55
LST1-208ENST00000376093 POLR1AO95602 1720 aaPredicted RBP18.49■□□□□ 0.55
LST1-208ENST00000376093 KIF15Q9NS87 1388 aa18.47■□□□□ 0.55
LST1-208ENST00000376093 CPS1P31327 1500 aa18.46■□□□□ 0.55
LST1-208ENST00000376093 TOM1O60784 492 aa18.46■□□□□ 0.55
LST1-208ENST00000376093 NUDT7P0C024 238 aa18.46■□□□□ 0.55
LST1-208ENST00000376093 OXER1Q8TDS5 423 aa18.46■□□□□ 0.55
LST1-208ENST00000376093 ERBB3P21860 1342 aa18.46■□□□□ 0.55
LST1-208ENST00000376093 RRP7BPQ9NSQ0 103 aa18.45■□□□□ 0.54
LST1-208ENST00000376093 NEURL4Q96JN8 1562 aa18.45■□□□□ 0.54
LST1-208ENST00000376093 ERBINQ96RT1 1412 aa18.44■□□□□ 0.54
LST1-208ENST00000376093 PRDM15P57071 1507 aaPredicted RBP18.44■□□□□ 0.54
LST1-208ENST00000376093 CFAP65Q6ZU64 1925 aaKnown RBP18.43■□□□□ 0.54
LST1-208ENST00000376093 UGGT1Q9NYU2 1555 aa18.42■□□□□ 0.54
LST1-208ENST00000376093 NLRP1Q9C000 1473 aa18.42■□□□□ 0.54
LST1-208ENST00000376093 ZNF316A6NFI3 1004 aaPredicted RBP18.42■□□□□ 0.54
LST1-208ENST00000376093 VARS2Q5ST30 1063 aaKnown RBP18.42■□□□□ 0.54
LST1-208ENST00000376093 CHIC2Q9UKJ5 165 aa18.42■□□□□ 0.54
LST1-208ENST00000376093 DEPDC5O75140 1603 aa18.41■□□□□ 0.54
LST1-208ENST00000376093 ERVK-7P63135 1459 aa18.41■□□□□ 0.54
LST1-208ENST00000376093 FAM50AQ14320 339 aaKnown RBP18.39■□□□□ 0.53
LST1-208ENST00000376093 ANKRD30AQ9BXX3 1397 aa18.39■□□□□ 0.53
LST1-208ENST00000376093 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.39■□□□□ 0.53
LST1-208ENST00000376093 ALKQ9UM73 1620 aa18.38■□□□□ 0.53
LST1-208ENST00000376093 KRTAP3-3Q9BYR6 98 aa18.37■□□□□ 0.53
LST1-208ENST00000376093 KRTAP3-2Q9BYR7 98 aa18.37■□□□□ 0.53
LST1-208ENST00000376093 VWDEQ8N2E2 1590 aa18.37■□□□□ 0.53
LST1-208ENST00000376093 UPF1Q92900 1129 aaKnown RBP eCLIP18.36■□□□□ 0.53
LST1-208ENST00000376093 LHX6Q9UPM6 363 aa18.36■□□□□ 0.53
LST1-208ENST00000376093 UBR1Q8IWV7 1749 aa18.35■□□□□ 0.53
LST1-208ENST00000376093 EMILIN3Q9NT22 766 aa18.35■□□□□ 0.53
LST1-208ENST00000376093 ADGRL2O95490 1459 aa18.34■□□□□ 0.53
LST1-208ENST00000376093 CAMK2BQ13554 666 aa18.34■□□□□ 0.53
LST1-208ENST00000376093 THEMISQ8N1K5 641 aaPredicted RBP18.34■□□□□ 0.53
LST1-208ENST00000376093 KANK1Q14678 1352 aa18.33■□□□□ 0.53
LST1-208ENST00000376093 IQGAP1P46940 1657 aa18.32■□□□□ 0.52
LST1-208ENST00000376093 TBC1D12O60347 775 aa18.32■□□□□ 0.52
LST1-208ENST00000376093 ANKLE2Q86XL3 938 aa18.32■□□□□ 0.52
LST1-208ENST00000376093 ARHGAP31Q2M1Z3 1444 aa18.32■□□□□ 0.52
LST1-208ENST00000376093 ZNF687Q8N1G0 1237 aa18.31■□□□□ 0.52
LST1-208ENST00000376093 NPHP4O75161 1426 aaPredicted RBP18.31■□□□□ 0.52
LST1-208ENST00000376093 STRCP1A6NGW2 1772 aa18.3■□□□□ 0.52
LST1-208ENST00000376093 PIK3C2BO00750 1634 aa18.29■□□□□ 0.52
LST1-208ENST00000376093 LMTK2Q8IWU2 1503 aa18.28■□□□□ 0.52
LST1-208ENST00000376093 MED14O60244 1454 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms