RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 ANKLE2Q86XL3 938 aa14.6□□□□□ -0.07
PDPN-203ENST00000376061 BCANQ96GW7 911 aa14.6□□□□□ -0.07
PDPN-203ENST00000376061 ABCC11Q96J66 1382 aa14.59□□□□□ -0.07
PDPN-203ENST00000376061 STK26Q9P289 416 aa14.59□□□□□ -0.07
PDPN-203ENST00000376061 NPHP4O75161 1426 aaPredicted RBP14.59□□□□□ -0.07
PDPN-203ENST00000376061 TULP4Q9NRJ4 1543 aa14.58□□□□□ -0.07
PDPN-203ENST00000376061 PTPRUQ92729 1446 aa14.58□□□□□ -0.08
PDPN-203ENST00000376061 DDX10Q13206 875 aaKnown RBP14.58□□□□□ -0.08
PDPN-203ENST00000376061 CHD2O14647 1828 aaKnown RBP14.57□□□□□ -0.08
PDPN-203ENST00000376061 TMF1P82094 1093 aa14.57□□□□□ -0.08
PDPN-203ENST00000376061 SLC26A8Q96RN1 970 aa14.57□□□□□ -0.08
PDPN-203ENST00000376061 FAM135BQ49AJ0 1406 aa14.56□□□□□ -0.08
PDPN-203ENST00000376061 TBX22Q9Y458 520 aa14.56□□□□□ -0.08
PDPN-203ENST00000376061 STRCQ7RTU9 1775 aa14.55□□□□□ -0.08
PDPN-203ENST00000376061 PIK3R4Q99570 1358 aa14.55□□□□□ -0.08
PDPN-203ENST00000376061 PTCH1Q13635 1447 aa14.54□□□□□ -0.08
PDPN-203ENST00000376061 NWD1Q149M9 1564 aa14.54□□□□□ -0.08
PDPN-203ENST00000376061 PLEKHH1Q9ULM0 1364 aa14.54□□□□□ -0.08
PDPN-203ENST00000376061 PRAM1Q96QH2 718 aa14.54□□□□□ -0.08
PDPN-203ENST00000376061 ADGRB2O60241 1585 aa14.53□□□□□ -0.08
PDPN-203ENST00000376061 ROBO2Q9HCK4 1378 aa14.53□□□□□ -0.08
PDPN-203ENST00000376061 POLR3GLQ9BT43 218 aa14.53□□□□□ -0.08
PDPN-203ENST00000376061 NCKAP5LQ9HCH0 1330 aa14.53□□□□□ -0.08
PDPN-203ENST00000376061 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.52□□□□□ -0.08
PDPN-203ENST00000376061 HSPA2P54652 639 aa14.51□□□□□ -0.09
PDPN-203ENST00000376061 SAFB2Q14151 953 aaKnown RBP eCLIP14.5□□□□□ -0.09
PDPN-203ENST00000376061 CDCA8Q53HL2 280 aa14.5□□□□□ -0.09
PDPN-203ENST00000376061 SIRT1Q96EB6 747 aa14.5□□□□□ -0.09
PDPN-203ENST00000376061 POGKQ9P215 609 aa14.5□□□□□ -0.09
PDPN-203ENST00000376061 WAPLQ7Z5K2 1190 aa14.49□□□□□ -0.09
PDPN-203ENST00000376061 AMOTL2Q9Y2J4 779 aa14.48□□□□□ -0.09
PDPN-203ENST00000376061 NALCNQ8IZF0 1738 aa14.48□□□□□ -0.09
PDPN-203ENST00000376061 EVC2Q86UK5 1308 aa14.48□□□□□ -0.09
PDPN-203ENST00000376061 MINK1Q8N4C8 1332 aaPredicted RBP14.48□□□□□ -0.09
PDPN-203ENST00000376061 STRCP1A6NGW2 1772 aa14.47□□□□□ -0.09
PDPN-203ENST00000376061 NKTRP30414 1462 aaKnown RBP14.45□□□□□ -0.1
PDPN-203ENST00000376061 TOPAZ1Q8N9V7 1692 aa14.45□□□□□ -0.1
PDPN-203ENST00000376061 KCNA6P17658 529 aa14.45□□□□□ -0.1
PDPN-203ENST00000376061 MIER1Q8N108 512 aa14.44□□□□□ -0.1
PDPN-203ENST00000376061 PUS7Q96PZ0 661 aaKnown RBP14.44□□□□□ -0.1
PDPN-203ENST00000376061 CDC42BPGQ6DT37 1551 aa14.43□□□□□ -0.1
PDPN-203ENST00000376061 FMN2Q9NZ56 1722 aa14.43□□□□□ -0.1
PDPN-203ENST00000376061 USP32Q8NFA0 1604 aa14.42□□□□□ -0.1
PDPN-203ENST00000376061 ATAD2Q6PL18 1390 aa14.42□□□□□ -0.1
PDPN-203ENST00000376061 CABP2Q9NPB3 220 aa14.42□□□□□ -0.1
PDPN-203ENST00000376061 ITSN1Q15811 1721 aa14.41□□□□□ -0.1
PDPN-203ENST00000376061 ATP7BP35670 1465 aa14.41□□□□□ -0.1
PDPN-203ENST00000376061 SRPK2P78362 688 aaKnown RBP14.41□□□□□ -0.1
PDPN-203ENST00000376061 NINLQ9Y2I6 1382 aa14.4□□□□□ -0.1
PDPN-203ENST00000376061 CDK19Q9BWU1 502 aa14.4□□□□□ -0.1
PDPN-203ENST00000376061 WASLO00401 505 aaPredicted RBP14.39□□□□□ -0.11
PDPN-203ENST00000376061 PANK3Q9H999 370 aa14.39□□□□□ -0.11
PDPN-203ENST00000376061 RGPD8O14715 1765 aaPredicted RBP14.39□□□□□ -0.11
PDPN-203ENST00000376061 AKAP12Q02952 1782 aa14.39□□□□□ -0.11
PDPN-203ENST00000376061 ADGRL3Q9HAR2 1447 aa14.39□□□□□ -0.11
PDPN-203ENST00000376061 ANP32CO43423 234 aa14.38□□□□□ -0.11
PDPN-203ENST00000376061 CD163L1Q9NR16 1453 aa14.38□□□□□ -0.11
PDPN-203ENST00000376061 ABCB7O75027 752 aa14.37□□□□□ -0.11
PDPN-203ENST00000376061 MON2Q7Z3U7 1717 aa14.37□□□□□ -0.11
PDPN-203ENST00000376061 XIRP1Q702N8 1843 aaKnown RBP14.37□□□□□ -0.11
PDPN-203ENST00000376061 ANKRD36BQ8N2N9 1353 aa14.37□□□□□ -0.11
PDPN-203ENST00000376061 PER1O15534 1290 aaPredicted RBP14.36□□□□□ -0.11
PDPN-203ENST00000376061 KCNA4P22459 653 aa14.36□□□□□ -0.11
PDPN-203ENST00000376061 TMC1Q8TDI8 760 aa14.35□□□□□ -0.11
PDPN-203ENST00000376061 SLC12A5Q9H2X9 1139 aa14.35□□□□□ -0.11
PDPN-203ENST00000376061 PPIP5K1Q6PFW1 1433 aa14.35□□□□□ -0.11
PDPN-203ENST00000376061 PRR36Q9H6K5 1346 aa14.35□□□□□ -0.11
PDPN-203ENST00000376061 NSD3Q9BZ95 1437 aa14.34□□□□□ -0.11
PDPN-203ENST00000376061 KIF20BQ96Q89 1820 aa14.34□□□□□ -0.11
PDPN-203ENST00000376061 A0A1W2PP64 1363 aa14.34□□□□□ -0.11
PDPN-203ENST00000376061 NRKQ7Z2Y5 1582 aa14.34□□□□□ -0.11
PDPN-203ENST00000376061 ANKARQ7Z5J8 1434 aa14.34□□□□□ -0.11
PDPN-203ENST00000376061 PRKRIP1Q9H875 184 aaPredicted RBP14.34□□□□□ -0.11
PDPN-203ENST00000376061 ANKRD26Q9UPS8 1709 aa14.33□□□□□ -0.12
PDPN-203ENST00000376061 NUDT16Q96DE0 195 aaKnown RBP14.33□□□□□ -0.12
PDPN-203ENST00000376061 CARD14Q9BXL6 1004 aa14.33□□□□□ -0.12
PDPN-203ENST00000376061 RBM33Q96EV2 1170 aaKnown RBP14.32□□□□□ -0.12
PDPN-203ENST00000376061 KTN1Q86UP2 1357 aaKnown RBP14.32□□□□□ -0.12
PDPN-203ENST00000376061 PARD3Q8TEW0 1356 aa14.32□□□□□ -0.12
PDPN-203ENST00000376061 NPC1L1Q9UHC9 1359 aa14.32□□□□□ -0.12
PDPN-203ENST00000376061 AMER1Q5JTC6 1135 aaPredicted RBP14.31□□□□□ -0.12
PDPN-203ENST00000376061 ZNF219Q9P2Y4 722 aaPredicted RBP14.31□□□□□ -0.12
PDPN-203ENST00000376061 CPSF1Q10570 1443 aaKnown RBP14.3□□□□□ -0.12
PDPN-203ENST00000376061 TMEM94Q12767 1356 aa14.3□□□□□ -0.12
PDPN-203ENST00000376061 PROSER2Q86WR7 435 aaPredicted RBP14.3□□□□□ -0.12
PDPN-203ENST00000376061 CABP1Q9NZU7 370 aa14.3□□□□□ -0.12
PDPN-203ENST00000376061 KNSTRNQ9Y448 316 aa14.3□□□□□ -0.12
PDPN-203ENST00000376061 CCDC61Q9Y6R9 512 aa14.3□□□□□ -0.12
PDPN-203ENST00000376061 LRRC7Q96NW7 1537 aa14.3□□□□□ -0.12
PDPN-203ENST00000376061 NCOA3Q9Y6Q9 1424 aa14.3□□□□□ -0.12
PDPN-203ENST00000376061 ZNF335Q9H4Z2 1342 aaPredicted RBP14.29□□□□□ -0.12
PDPN-203ENST00000376061 TERF2IPQ9NYB0 399 aa14.29□□□□□ -0.12
PDPN-203ENST00000376061 DCCP43146 1447 aa14.29□□□□□ -0.12
PDPN-203ENST00000376061 CCER2I3L3R5 266 aa14.28□□□□□ -0.12
PDPN-203ENST00000376061 CNGB1Q14028 1251 aaPredicted RBP14.28□□□□□ -0.12
PDPN-203ENST00000376061 NUTM2FA1L443 756 aa14.27□□□□□ -0.12
PDPN-203ENST00000376061 SLC4A2P04920 1241 aa14.27□□□□□ -0.12
PDPN-203ENST00000376061 CC2D1BQ5T0F9 858 aaKnown RBP14.27□□□□□ -0.12
PDPN-203ENST00000376061 HDGFL2Q7Z4V5 671 aaPredicted RBP14.27□□□□□ -0.12
PDPN-203ENST00000376061 C14orf37Q86TY3 774 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms