RNA–Protein interactions for RNA: ENST00000376020.6

SHROOM4-202, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SHROOM4, Length 9,556 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-202ENST00000376020 WDR33Q9C0J8 1336 aaKnown RBP10.63□□□□□ -0.71
SHROOM4-202ENST00000376020 SRCIN1Q9C0H9 1055 aa10.63□□□□□ -0.71
SHROOM4-202ENST00000376020 NEMFO60524 1076 aa10.63□□□□□ -0.71
SHROOM4-202ENST00000376020 ANKRD1Q15327 319 aa10.63□□□□□ -0.71
SHROOM4-202ENST00000376020 PRIMPOLQ96LW4 560 aa10.63□□□□□ -0.71
SHROOM4-202ENST00000376020 MNS1Q8NEH6 495 aa10.62□□□□□ -0.71
SHROOM4-202ENST00000376020 ABCC11Q96J66 1382 aa10.62□□□□□ -0.71
SHROOM4-202ENST00000376020 RPRD2Q5VT52 1461 aaKnown RBP10.62□□□□□ -0.71
SHROOM4-202ENST00000376020 TERF1P54274 439 aa10.62□□□□□ -0.71
SHROOM4-202ENST00000376020 PCF11O94913 1555 aaKnown RBP10.62□□□□□ -0.71
SHROOM4-202ENST00000376020 ERLIN1O75477 346 aa10.62□□□□□ -0.71
SHROOM4-202ENST00000376020 LEKR1Q6ZMV7 388 aa10.62□□□□□ -0.71
SHROOM4-202ENST00000376020 AEBP1Q8IUX7 1158 aa10.62□□□□□ -0.71
SHROOM4-202ENST00000376020 TSPY26PQ9H489 355 aa10.62□□□□□ -0.71
SHROOM4-202ENST00000376020 ANKRD45Q5TZF3 282 aa10.61□□□□□ -0.71
SHROOM4-202ENST00000376020 PRKCSHP14314 528 aaPredicted RBP10.61□□□□□ -0.71
SHROOM4-202ENST00000376020 DHX16O60231 1041 aaKnown RBP10.61□□□□□ -0.71
SHROOM4-202ENST00000376020 JMYQ8N9B5 988 aa10.61□□□□□ -0.71
SHROOM4-202ENST00000376020 GPRASP1Q5JY77 1395 aa10.61□□□□□ -0.71
SHROOM4-202ENST00000376020 MCM4P33991 863 aa10.61□□□□□ -0.71
SHROOM4-202ENST00000376020 RUFY1Q96T51 708 aa10.61□□□□□ -0.71
SHROOM4-202ENST00000376020 IFT57Q9NWB7 429 aa10.61□□□□□ -0.71
SHROOM4-202ENST00000376020 CALCOCO1Q9P1Z2 691 aa10.6□□□□□ -0.71
SHROOM4-202ENST00000376020 MCM3P25205 808 aa10.6□□□□□ -0.71
SHROOM4-202ENST00000376020 CLCN1P35523 988 aa10.6□□□□□ -0.71
SHROOM4-202ENST00000376020 HOMER1Q86YM7 354 aa10.6□□□□□ -0.71
SHROOM4-202ENST00000376020 CREBRFQ8IUR6 639 aa10.6□□□□□ -0.71
SHROOM4-202ENST00000376020 KLHL34Q8N239 644 aa10.6□□□□□ -0.71
SHROOM4-202ENST00000376020 NESP48681 1621 aa10.6□□□□□ -0.71
SHROOM4-202ENST00000376020 NAP1L2Q9ULW6 460 aaPredicted RBP10.6□□□□□ -0.71
SHROOM4-202ENST00000376020 NAIPQ13075 1403 aa10.6□□□□□ -0.71
SHROOM4-202ENST00000376020 CAMSAP2Q08AD1 1489 aa10.6□□□□□ -0.71
SHROOM4-202ENST00000376020 IQGAP2Q13576 1575 aa10.6□□□□□ -0.71
SHROOM4-202ENST00000376020 RALGAPBQ86X10 1494 aa10.59□□□□□ -0.71
SHROOM4-202ENST00000376020 UNC13AQ9UPW8 1703 aa10.59□□□□□ -0.71
SHROOM4-202ENST00000376020 SMC3Q9UQE7 1217 aa10.59□□□□□ -0.71
SHROOM4-202ENST00000376020 CCDC47Q96A33 483 aaKnown RBP10.59□□□□□ -0.71
SHROOM4-202ENST00000376020 KIF14Q15058 1648 aa10.59□□□□□ -0.71
SHROOM4-202ENST00000376020 SYNJ2O15056 1496 aa10.59□□□□□ -0.71
SHROOM4-202ENST00000376020 GCC2Q8IWJ2 1684 aa10.59□□□□□ -0.71
SHROOM4-202ENST00000376020 HSP90B1P14625 803 aaKnown RBP10.59□□□□□ -0.71
SHROOM4-202ENST00000376020 KINO60870 393 aaKnown RBP10.59□□□□□ -0.71
SHROOM4-202ENST00000376020 LUC7LQ9NQ29 371 aaKnown RBP10.58□□□□□ -0.71
SHROOM4-202ENST00000376020 POLR1AO95602 1720 aaPredicted RBP10.58□□□□□ -0.72
SHROOM4-202ENST00000376020 RDXP35241 583 aaKnown RBP10.58□□□□□ -0.72
SHROOM4-202ENST00000376020 CCDC191Q8NCU4 936 aa10.58□□□□□ -0.72
SHROOM4-202ENST00000376020 KCNH8Q96L42 1107 aa10.58□□□□□ -0.72
SHROOM4-202ENST00000376020 CCDC112Q8NEF3 446 aa10.58□□□□□ -0.72
SHROOM4-202ENST00000376020 NSD2O96028 1365 aa10.58□□□□□ -0.72
SHROOM4-202ENST00000376020 GOLGA6L7A0A1B0GV03 622 aa10.58□□□□□ -0.72
SHROOM4-202ENST00000376020 K7ELQ4 463 aaPredicted RBP10.58□□□□□ -0.72
SHROOM4-202ENST00000376020 GBP3Q9H0R5 595 aa10.58□□□□□ -0.72
SHROOM4-202ENST00000376020 COG6Q9Y2V7 657 aa10.57□□□□□ -0.72
SHROOM4-202ENST00000376020 ZMYM4Q5VZL5 1548 aa10.57□□□□□ -0.72
SHROOM4-202ENST00000376020 GNAI3P08754 354 aa10.57□□□□□ -0.72
SHROOM4-202ENST00000376020 FRAT2O75474 233 aaPredicted RBP10.57□□□□□ -0.72
SHROOM4-202ENST00000376020 ANKRD30BQ9BXX2 1392 aa10.57□□□□□ -0.72
SHROOM4-202ENST00000376020 C9orf84Q5VXU9 1444 aa10.57□□□□□ -0.72
SHROOM4-202ENST00000376020 LRPPRCP42704 1394 aaKnown RBP10.56□□□□□ -0.72
SHROOM4-202ENST00000376020 GRIN2BQ13224 1484 aa10.56□□□□□ -0.72
SHROOM4-202ENST00000376020 DEF6Q9H4E7 631 aa10.56□□□□□ -0.72
SHROOM4-202ENST00000376020 CTR9Q6PD62 1173 aa10.56□□□□□ -0.72
SHROOM4-202ENST00000376020 CEP89Q96ST8 783 aa10.56□□□□□ -0.72
SHROOM4-202ENST00000376020 NEXNQ0ZGT2 675 aa10.56□□□□□ -0.72
SHROOM4-202ENST00000376020 NUP160Q12769 1436 aa10.56□□□□□ -0.72
SHROOM4-202ENST00000376020 TROQ12816 1431 aaPredicted RBP10.56□□□□□ -0.72
SHROOM4-202ENST00000376020 ADGBQ8N7X0 1667 aa10.56□□□□□ -0.72
SHROOM4-202ENST00000376020 CFAP45Q9UL16 551 aa10.55□□□□□ -0.72
SHROOM4-202ENST00000376020 GOLGA6L9A6NEM1 432 aa10.55□□□□□ -0.72
SHROOM4-202ENST00000376020 TRIM29Q14134 588 aa10.55□□□□□ -0.72
SHROOM4-202ENST00000376020 ERC1Q8IUD2 1116 aa10.55□□□□□ -0.72
SHROOM4-202ENST00000376020 ZNF396Q96N95 335 aaPredicted RBP10.55□□□□□ -0.72
SHROOM4-202ENST00000376020 TPD52L1Q16890 204 aaPredicted RBP10.55□□□□□ -0.72
SHROOM4-202ENST00000376020 OLFM4Q6UX06 510 aa10.54□□□□□ -0.72
SHROOM4-202ENST00000376020 SMARCE1Q969G3 411 aa10.54□□□□□ -0.72
SHROOM4-202ENST00000376020 ABCA10Q8WWZ4 1543 aa10.54□□□□□ -0.72
SHROOM4-202ENST00000376020 ERBINQ96RT1 1412 aa10.54□□□□□ -0.72
SHROOM4-202ENST00000376020 CBFA2T2O43439 604 aa10.54□□□□□ -0.72
SHROOM4-202ENST00000376020 MCTP1Q6DN14 999 aa10.54□□□□□ -0.72
SHROOM4-202ENST00000376020 BICD2Q8TD16 824 aa10.54□□□□□ -0.72
SHROOM4-202ENST00000376020 DACH1Q9UI36 760 aa10.54□□□□□ -0.72
SHROOM4-202ENST00000376020 BRPF3Q9ULD4 1205 aa10.54□□□□□ -0.72
SHROOM4-202ENST00000376020 PES1O00541 588 aaKnown RBP10.54□□□□□ -0.72
SHROOM4-202ENST00000376020 TUBBP07437 444 aa10.54□□□□□ -0.72
SHROOM4-202ENST00000376020 FOXD1Q16676 465 aa10.54□□□□□ -0.72
SHROOM4-202ENST00000376020 SAFBQ15424 915 aaKnown RBP eCLIP10.54□□□□□ -0.72
SHROOM4-202ENST00000376020 R3HCC1Q9Y3T6 440 aaKnown RBP10.54□□□□□ -0.72
SHROOM4-202ENST00000376020 APAF1O14727 1248 aa10.53□□□□□ -0.72
SHROOM4-202ENST00000376020 DDX11Q96FC9 970 aa10.53□□□□□ -0.72
SHROOM4-202ENST00000376020 CGNQ9P2M7 1197 aaKnown RBP10.53□□□□□ -0.72
SHROOM4-202ENST00000376020 POTEB2H3BUK9 544 aa10.53□□□□□ -0.72
SHROOM4-202ENST00000376020 SYNE3Q6ZMZ3 975 aa10.53□□□□□ -0.72
SHROOM4-202ENST00000376020 DIAPH1O60610 1272 aaKnown RBP10.53□□□□□ -0.72
SHROOM4-202ENST00000376020 KRT85P78386 507 aa10.53□□□□□ -0.72
SHROOM4-202ENST00000376020 DDX58O95786 925 aaKnown RBP10.53□□□□□ -0.72
SHROOM4-202ENST00000376020 TRIM5Q9C035 493 aa10.53□□□□□ -0.72
SHROOM4-202ENST00000376020 UVSSAQ2YD98 709 aa10.52□□□□□ -0.72
SHROOM4-202ENST00000376020 ZSCAN31Q96LW9 406 aaPredicted RBP10.52□□□□□ -0.72
SHROOM4-202ENST00000376020 PAXBP1Q9Y5B6 917 aa10.52□□□□□ -0.72
SHROOM4-202ENST00000376020 CPLX1O14810 134 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms