RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 RPGRIP1LQ68CZ1 1315 aa16.72■□□□□ 0.27
C9orf47-203ENST00000375851 ABCC5O15440 1437 aa16.72■□□□□ 0.27
C9orf47-203ENST00000375851 ZKSCAN1P17029 563 aaPredicted RBP16.71■□□□□ 0.27
C9orf47-203ENST00000375851 FOXD4L6Q3SYB3 417 aaPredicted RBP16.71■□□□□ 0.27
C9orf47-203ENST00000375851 FOXD4L3Q6VB84 417 aaPredicted RBP16.71■□□□□ 0.27
C9orf47-203ENST00000375851 SYTL4Q96C24 671 aaPredicted RBP16.71■□□□□ 0.27
C9orf47-203ENST00000375851 CCDC141Q6ZP82 1450 aa16.71■□□□□ 0.27
C9orf47-203ENST00000375851 THEMISQ8N1K5 641 aaPredicted RBP16.71■□□□□ 0.26
C9orf47-203ENST00000375851 SF3A1Q15459 793 aaKnown RBP16.7■□□□□ 0.26
C9orf47-203ENST00000375851 GAS2L2Q8NHY3 880 aa16.7■□□□□ 0.26
C9orf47-203ENST00000375851 TSR2Q969E8 191 aaKnown RBP16.7■□□□□ 0.26
C9orf47-203ENST00000375851 PDE3AQ14432 1141 aa16.7■□□□□ 0.26
C9orf47-203ENST00000375851 MAP3K1Q13233 1512 aa16.7■□□□□ 0.26
C9orf47-203ENST00000375851 HSP90AB4PQ58FF6 505 aa16.7■□□□□ 0.26
C9orf47-203ENST00000375851 ZNF692Q9BU19 519 aaPredicted RBP16.7■□□□□ 0.26
C9orf47-203ENST00000375851 ATP6V1DQ9Y5K8 247 aa16.7■□□□□ 0.26
C9orf47-203ENST00000375851 G3V3G9 751 aa16.69■□□□□ 0.26
C9orf47-203ENST00000375851 BCAR3O75815 825 aa16.69■□□□□ 0.26
C9orf47-203ENST00000375851 ESCO1Q5FWF5 840 aa16.69■□□□□ 0.26
C9orf47-203ENST00000375851 DCAF8Q5TAQ9 597 aa16.69■□□□□ 0.26
C9orf47-203ENST00000375851 GPRASP1Q5JY77 1395 aa16.69■□□□□ 0.26
C9orf47-203ENST00000375851 FAM184AQ8NB25 1140 aa16.69■□□□□ 0.26
C9orf47-203ENST00000375851 AKNAQ7Z591 1439 aa16.69■□□□□ 0.26
C9orf47-203ENST00000375851 H3BQV1 296 aa16.69■□□□□ 0.26
C9orf47-203ENST00000375851 PHF14O94880 888 aa16.69■□□□□ 0.26
C9orf47-203ENST00000375851 AIMP1Q12904 312 aaKnown RBP16.69■□□□□ 0.26
C9orf47-203ENST00000375851 LRRFIP1Q32MZ4 808 aaKnown RBP16.69■□□□□ 0.26
C9orf47-203ENST00000375851 IFFO2Q5TF58 517 aa16.69■□□□□ 0.26
C9orf47-203ENST00000375851 CUL7Q14999 1698 aa16.68■□□□□ 0.26
C9orf47-203ENST00000375851 TWISTNBQ3B726 338 aaPredicted RBP16.68■□□□□ 0.26
C9orf47-203ENST00000375851 INTS3Q68E01 1043 aaKnown RBP16.68■□□□□ 0.26
C9orf47-203ENST00000375851 SLC26A8Q96RN1 970 aa16.68■□□□□ 0.26
C9orf47-203ENST00000375851 C22orf23Q9BZE7 217 aa16.68■□□□□ 0.26
C9orf47-203ENST00000375851 GRIN2AQ12879 1464 aa16.68■□□□□ 0.26
C9orf47-203ENST00000375851 PEG3Q9GZU2 1588 aa16.68■□□□□ 0.26
C9orf47-203ENST00000375851 UBTFL1P0CB47 393 aaPredicted RBP16.68■□□□□ 0.26
C9orf47-203ENST00000375851 SULT6B1Q6IMI4 303 aa16.68■□□□□ 0.26
C9orf47-203ENST00000375851 C11orf95C9JLR9 678 aaPredicted RBP16.68■□□□□ 0.26
C9orf47-203ENST00000375851 CAMSAP2Q08AD1 1489 aa16.67■□□□□ 0.26
C9orf47-203ENST00000375851 TPM4P67936 248 aa16.67■□□□□ 0.26
C9orf47-203ENST00000375851 RIC3Q7Z5B4 369 aa16.67■□□□□ 0.26
C9orf47-203ENST00000375851 CHMP5Q9NZZ3 219 aa16.67■□□□□ 0.26
C9orf47-203ENST00000375851 GSE1Q14687 1217 aa16.67■□□□□ 0.26
C9orf47-203ENST00000375851 PROSER2Q86WR7 435 aaPredicted RBP16.66■□□□□ 0.26
C9orf47-203ENST00000375851 CHMP4CQ96CF2 233 aa16.66■□□□□ 0.26
C9orf47-203ENST00000375851 SKOR2Q2VWA4 1001 aaPredicted RBP16.66■□□□□ 0.26
C9orf47-203ENST00000375851 URB2Q14146 1524 aaKnown RBP16.66■□□□□ 0.26
C9orf47-203ENST00000375851 RASSF8Q8NHQ8 419 aa16.65■□□□□ 0.26
C9orf47-203ENST00000375851 CCDC30Q5VVM6 783 aa16.65■□□□□ 0.26
C9orf47-203ENST00000375851 RTEL1-TNFRSF6BF6WH68 1400 aa16.65■□□□□ 0.26
C9orf47-203ENST00000375851 NCOA1Q15788 1441 aa16.65■□□□□ 0.26
C9orf47-203ENST00000375851 GNAI3P08754 354 aa16.65■□□□□ 0.26
C9orf47-203ENST00000375851 PTPN23Q9H3S7 1636 aa16.65■□□□□ 0.26
C9orf47-203ENST00000375851 WDR63Q8IWG1 891 aa16.65■□□□□ 0.26
C9orf47-203ENST00000375851 CLSTN1O94985 981 aa16.64■□□□□ 0.25
C9orf47-203ENST00000375851 PDZRN3Q9UPQ7 1066 aa16.64■□□□□ 0.25
C9orf47-203ENST00000375851 ATAD2Q6PL18 1390 aa16.64■□□□□ 0.25
C9orf47-203ENST00000375851 ERC2O15083 957 aa16.63■□□□□ 0.25
C9orf47-203ENST00000375851 RNF20Q5VTR2 975 aa16.63■□□□□ 0.25
C9orf47-203ENST00000375851 PLEKHO1Q53GL0 409 aaPredicted RBP16.63■□□□□ 0.25
C9orf47-203ENST00000375851 CPLX2Q6PUV4 134 aaKnown RBP16.63■□□□□ 0.25
C9orf47-203ENST00000375851 NOB1Q9ULX3 412 aaKnown RBP16.63■□□□□ 0.25
C9orf47-203ENST00000375851 CDC45O75419 566 aa16.62■□□□□ 0.25
C9orf47-203ENST00000375851 APPP05067 770 aa16.61■□□□□ 0.25
C9orf47-203ENST00000375851 SURF6O75683 361 aaKnown RBP16.61■□□□□ 0.25
C9orf47-203ENST00000375851 MCTP1Q6DN14 999 aa16.61■□□□□ 0.25
C9orf47-203ENST00000375851 ZNF608Q9ULD9 1512 aaPredicted RBP16.61■□□□□ 0.25
C9orf47-203ENST00000375851 SMG6Q86US8 1419 aaKnown RBP16.61■□□□□ 0.25
C9orf47-203ENST00000375851 C1orf115Q9H7X2 142 aa16.6■□□□□ 0.25
C9orf47-203ENST00000375851 CCDC61Q9Y6R9 512 aa16.6■□□□□ 0.25
C9orf47-203ENST00000375851 SLC4A2P04920 1241 aa16.6■□□□□ 0.25
C9orf47-203ENST00000375851 SYNE3Q6ZMZ3 975 aa16.6■□□□□ 0.25
C9orf47-203ENST00000375851 CD109Q6YHK3 1445 aa16.6■□□□□ 0.25
C9orf47-203ENST00000375851 NEUROD6Q96NK8 337 aa16.6■□□□□ 0.25
C9orf47-203ENST00000375851 CLASRPQ8N2M8 674 aaKnown RBP16.59■□□□□ 0.25
C9orf47-203ENST00000375851 CT47B1P0C2W7 299 aaPredicted RBP16.59■□□□□ 0.25
C9orf47-203ENST00000375851 AKAP17AQ02040 695 aaKnown RBP16.59■□□□□ 0.25
C9orf47-203ENST00000375851 RRS1Q15050 365 aaKnown RBP16.59■□□□□ 0.25
C9orf47-203ENST00000375851 ATF7IPQ6VMQ6 1270 aa16.59■□□□□ 0.25
C9orf47-203ENST00000375851 NSD3Q9BZ95 1437 aa16.58■□□□□ 0.25
C9orf47-203ENST00000375851 HDGFL1Q5TGJ6 251 aa16.58■□□□□ 0.24
C9orf47-203ENST00000375851 CPLX1O14810 134 aa16.58■□□□□ 0.24
C9orf47-203ENST00000375851 FCHSD2O94868 740 aa16.57■□□□□ 0.24
C9orf47-203ENST00000375851 NUCB2P80303 420 aa16.57■□□□□ 0.24
C9orf47-203ENST00000375851 TRDNQ13061 729 aa16.57■□□□□ 0.24
C9orf47-203ENST00000375851 CREBRFQ8IUR6 639 aa16.57■□□□□ 0.24
C9orf47-203ENST00000375851 WWC1Q8IX03 1113 aa16.57■□□□□ 0.24
C9orf47-203ENST00000375851 GCC1Q96CN9 775 aa16.57■□□□□ 0.24
C9orf47-203ENST00000375851 NUDT16Q96DE0 195 aaKnown RBP16.57■□□□□ 0.24
C9orf47-203ENST00000375851 ANKLE2Q86XL3 938 aa16.56■□□□□ 0.24
C9orf47-203ENST00000375851 MSH5O43196 834 aa16.56■□□□□ 0.24
C9orf47-203ENST00000375851 WAPLQ7Z5K2 1190 aa16.56■□□□□ 0.24
C9orf47-203ENST00000375851 VPS37DQ86XT2 251 aa16.56■□□□□ 0.24
C9orf47-203ENST00000375851 SMC3Q9UQE7 1217 aa16.56■□□□□ 0.24
C9orf47-203ENST00000375851 BIVM-ERCC5R4GMW8 1640 aa16.55■□□□□ 0.24
C9orf47-203ENST00000375851 VPS37CA5D8V6 355 aaPredicted RBP16.55■□□□□ 0.24
C9orf47-203ENST00000375851 SLFN5Q08AF3 891 aa16.55■□□□□ 0.24
C9orf47-203ENST00000375851 ADGRL1O94910 1474 aa16.55■□□□□ 0.24
C9orf47-203ENST00000375851 ADGRF5Q8IZF2 1346 aa16.55■□□□□ 0.24
C9orf47-203ENST00000375851 GNAI2P04899 355 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms