RNA–Protein interactions for RNA: ENST00000375750.7

MSH5-203, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-203ENST00000375750 KDM2BQ8NHM5 1336 aa19.85■□□□□ 0.77
MSH5-203ENST00000375750 RGS3P49796 1198 aa19.85■□□□□ 0.77
MSH5-203ENST00000375750 ERVK-7P63135 1459 aa19.85■□□□□ 0.77
MSH5-203ENST00000375750 WDR43Q15061 677 aaKnown RBP eCLIP19.84■□□□□ 0.77
MSH5-203ENST00000375750 KNSTRNQ9Y448 316 aa19.84■□□□□ 0.77
MSH5-203ENST00000375750 ESF1Q9H501 851 aaKnown RBP19.83■□□□□ 0.77
MSH5-203ENST00000375750 SPINK5Q9NQ38 1064 aaPredicted RBP19.83■□□□□ 0.77
MSH5-203ENST00000375750 NEXMIFQ5QGS0 1516 aa19.83■□□□□ 0.77
MSH5-203ENST00000375750 STAG3Q9UJ98 1225 aa19.83■□□□□ 0.77
MSH5-203ENST00000375750 PPM1GO15355 546 aaPredicted RBP19.81■□□□□ 0.76
MSH5-203ENST00000375750 MYO5BQ9ULV0 1848 aa19.8■□□□□ 0.76
MSH5-203ENST00000375750 TMEM131LA2VDJ0 1609 aa19.8■□□□□ 0.76
MSH5-203ENST00000375750 NFKBIBQ15653 356 aa19.8■□□□□ 0.76
MSH5-203ENST00000375750 AMER1Q5JTC6 1135 aaPredicted RBP19.8■□□□□ 0.76
MSH5-203ENST00000375750 ZMYM3Q14202 1370 aa19.79■□□□□ 0.76
MSH5-203ENST00000375750 C8orf34Q49A92 452 aa19.79■□□□□ 0.76
MSH5-203ENST00000375750 CDCA8Q53HL2 280 aa19.79■□□□□ 0.76
MSH5-203ENST00000375750 BCAR3O75815 825 aa19.78■□□□□ 0.76
MSH5-203ENST00000375750 GOLGA2Q08379 1002 aa19.78■□□□□ 0.76
MSH5-203ENST00000375750 ADGRB1O14514 1584 aa19.78■□□□□ 0.76
MSH5-203ENST00000375750 USP35Q9P2H5 1018 aa19.78■□□□□ 0.76
MSH5-203ENST00000375750 BRPF3Q9ULD4 1205 aa19.78■□□□□ 0.76
MSH5-203ENST00000375750 DDRGK1Q96HY6 314 aa19.78■□□□□ 0.76
MSH5-203ENST00000375750 SETBP1Q9Y6X0 1596 aa19.77■□□□□ 0.76
MSH5-203ENST00000375750 CENPJQ9HC77 1338 aaPredicted RBP19.77■□□□□ 0.76
MSH5-203ENST00000375750 CENPQQ7L2Z9 268 aaPredicted RBP19.77■□□□□ 0.76
MSH5-203ENST00000375750 DMRT2Q9Y5R5 561 aa19.77■□□□□ 0.76
MSH5-203ENST00000375750 ZNF521Q96K83 1311 aa19.76■□□□□ 0.75
MSH5-203ENST00000375750 APAF1O14727 1248 aa19.76■□□□□ 0.75
MSH5-203ENST00000375750 SLFN5Q08AF3 891 aa19.74■□□□□ 0.75
MSH5-203ENST00000375750 FAM161AQ3B820 660 aa19.74■□□□□ 0.75
MSH5-203ENST00000375750 STK26Q9P289 416 aa19.74■□□□□ 0.75
MSH5-203ENST00000375750 SPATA31D1Q6ZQQ2 1576 aa19.74■□□□□ 0.75
MSH5-203ENST00000375750 ZFYVE9O95405 1425 aa19.73■□□□□ 0.75
MSH5-203ENST00000375750 DAXXQ9UER7 740 aaPredicted RBP19.73■□□□□ 0.75
MSH5-203ENST00000375750 FRAT1Q92837 279 aaPredicted RBP19.72■□□□□ 0.75
MSH5-203ENST00000375750 INSRP06213 1382 aa19.72■□□□□ 0.75
MSH5-203ENST00000375750 SAFB2Q14151 953 aaKnown RBP eCLIP19.71■□□□□ 0.75
MSH5-203ENST00000375750 SLC24A1O60721 1099 aa19.71■□□□□ 0.75
MSH5-203ENST00000375750 GSE1Q14687 1217 aa19.71■□□□□ 0.75
MSH5-203ENST00000375750 A2ML1A8K2U0 1454 aa19.7■□□□□ 0.74
MSH5-203ENST00000375750 IGHDP01880 384 aa19.7■□□□□ 0.74
MSH5-203ENST00000375750 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.7■□□□□ 0.74
MSH5-203ENST00000375750 CEBPAP49715 358 aaPredicted RBP19.69■□□□□ 0.74
MSH5-203ENST00000375750 FRAT2O75474 233 aaPredicted RBP19.69■□□□□ 0.74
MSH5-203ENST00000375750 PLPPR3Q6T4P5 718 aa19.69■□□□□ 0.74
MSH5-203ENST00000375750 MYO3AQ8NEV4 1616 aa19.68■□□□□ 0.74
MSH5-203ENST00000375750 SBNO2Q9Y2G9 1366 aa19.68■□□□□ 0.74
MSH5-203ENST00000375750 KDM5AP29375 1690 aaKnown RBP19.67■□□□□ 0.74
MSH5-203ENST00000375750 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.66■□□□□ 0.74
MSH5-203ENST00000375750 MYOM1P52179 1685 aa19.66■□□□□ 0.74
MSH5-203ENST00000375750 RIMS2Q9UQ26 1411 aa19.65■□□□□ 0.74
MSH5-203ENST00000375750 ASXL1Q8IXJ9 1541 aa19.65■□□□□ 0.74
MSH5-203ENST00000375750 SEC24BO95487 1268 aa19.65■□□□□ 0.74
MSH5-203ENST00000375750 TRMT2AQ8IZ69 625 aaKnown RBP19.65■□□□□ 0.74
MSH5-203ENST00000375750 PANK1Q8TE04 598 aa19.64■□□□□ 0.73
MSH5-203ENST00000375750 QRICH2Q9H0J4 1663 aa19.64■□□□□ 0.73
MSH5-203ENST00000375750 TNRQ92752 1358 aa19.64■□□□□ 0.73
MSH5-203ENST00000375750 NEUROD2Q15784 382 aa19.64■□□□□ 0.73
MSH5-203ENST00000375750 CARD14Q9BXL6 1004 aa19.64■□□□□ 0.73
MSH5-203ENST00000375750 SLC12A5Q9H2X9 1139 aa19.63■□□□□ 0.73
MSH5-203ENST00000375750 TNNT2P45379 298 aaPredicted RBP19.63■□□□□ 0.73
MSH5-203ENST00000375750 COG6Q9Y2V7 657 aa19.62■□□□□ 0.73
MSH5-203ENST00000375750 ALKQ9UM73 1620 aa19.61■□□□□ 0.73
MSH5-203ENST00000375750 PRAM1Q96QH2 718 aa19.61■□□□□ 0.73
MSH5-203ENST00000375750 RRP7AQ9Y3A4 280 aaKnown RBP19.61■□□□□ 0.73
MSH5-203ENST00000375750 ARHGEF28Q8N1W1 1705 aaKnown RBP19.61■□□□□ 0.73
MSH5-203ENST00000375750 YTHDC2Q9H6S0 1430 aaKnown RBP19.61■□□□□ 0.73
MSH5-203ENST00000375750 CABP2Q9NPB3 220 aa19.61■□□□□ 0.73
MSH5-203ENST00000375750 TNNQ9UQP3 1299 aa19.61■□□□□ 0.73
MSH5-203ENST00000375750 DNAJC5Q9H3Z4 198 aa19.6■□□□□ 0.73
MSH5-203ENST00000375750 EVC2Q86UK5 1308 aa19.59■□□□□ 0.73
MSH5-203ENST00000375750 POGKQ9P215 609 aa19.59■□□□□ 0.73
MSH5-203ENST00000375750 NKTRP30414 1462 aaKnown RBP19.58■□□□□ 0.73
MSH5-203ENST00000375750 USP19O94966 1318 aa19.58■□□□□ 0.73
MSH5-203ENST00000375750 MINK1Q8N4C8 1332 aaPredicted RBP19.58■□□□□ 0.73
MSH5-203ENST00000375750 CANXP27824 592 aaKnown RBP19.56■□□□□ 0.72
MSH5-203ENST00000375750 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.56■□□□□ 0.72
MSH5-203ENST00000375750 PTPRMP28827 1452 aa19.56■□□□□ 0.72
MSH5-203ENST00000375750 BCL2L13Q9BXK5 485 aa19.56■□□□□ 0.72
MSH5-203ENST00000375750 TULP4Q9NRJ4 1543 aa19.56■□□□□ 0.72
MSH5-203ENST00000375750 E9PSI1 815 aa19.55■□□□□ 0.72
MSH5-203ENST00000375750 WAPLQ7Z5K2 1190 aa19.55■□□□□ 0.72
MSH5-203ENST00000375750 SRPK2P78362 688 aaKnown RBP19.55■□□□□ 0.72
MSH5-203ENST00000375750 WWC1Q8IX03 1113 aa19.53■□□□□ 0.72
MSH5-203ENST00000375750 SLKQ9H2G2 1235 aaPredicted RBP19.53■□□□□ 0.72
MSH5-203ENST00000375750 HDGFP51858 240 aaKnown RBP19.53■□□□□ 0.72
MSH5-203ENST00000375750 TMEM2Q9UHN6 1383 aa19.53■□□□□ 0.72
MSH5-203ENST00000375750 METP08581 1390 aa19.52■□□□□ 0.72
MSH5-203ENST00000375750 CLUAP1Q96AJ1 413 aa19.51■□□□□ 0.71
MSH5-203ENST00000375750 NPC1L1Q9UHC9 1359 aa19.51■□□□□ 0.71
MSH5-203ENST00000375750 NSD3Q9BZ95 1437 aa19.51■□□□□ 0.71
MSH5-203ENST00000375750 LTKP29376 864 aa19.51■□□□□ 0.71
MSH5-203ENST00000375750 RLBP1P12271 317 aa19.5■□□□□ 0.71
MSH5-203ENST00000375750 PRKCSHP14314 528 aaPredicted RBP19.49■□□□□ 0.71
MSH5-203ENST00000375750 PUS7Q96PZ0 661 aaKnown RBP19.49■□□□□ 0.71
MSH5-203ENST00000375750 UBR1Q8IWV7 1749 aa19.49■□□□□ 0.71
MSH5-203ENST00000375750 TXNDC2Q86VQ3 553 aa19.49■□□□□ 0.71
MSH5-203ENST00000375750 PCDHB15Q9Y5E8 787 aa19.49■□□□□ 0.71
MSH5-203ENST00000375750 NRXN3Q9Y4C0 1643 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms