RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 ANO2Q9NQ90 1003 aa20.62■□□□□ 0.89
VARS-215ENST00000375663 UGGT2Q9NYU1 1516 aa20.62■□□□□ 0.89
VARS-215ENST00000375663 PRKAR2BP31323 418 aa20.61■□□□□ 0.89
VARS-215ENST00000375663 C1orf115Q9H7X2 142 aa20.61■□□□□ 0.89
VARS-215ENST00000375663 HDAC5Q9UQL6 1122 aa20.61■□□□□ 0.89
VARS-215ENST00000375663 CT47B1P0C2W7 299 aaPredicted RBP20.6■□□□□ 0.89
VARS-215ENST00000375663 ATP6V1DQ9Y5K8 247 aa20.6■□□□□ 0.89
VARS-215ENST00000375663 FAM13BQ9NYF5 915 aa20.59■□□□□ 0.89
VARS-215ENST00000375663 RARSP54136 660 aaKnown RBP20.59■□□□□ 0.89
VARS-215ENST00000375663 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.59■□□□□ 0.89
VARS-215ENST00000375663 NKTRP30414 1462 aaKnown RBP20.58■□□□□ 0.89
VARS-215ENST00000375663 LRPPRCP42704 1394 aaKnown RBP20.58■□□□□ 0.89
VARS-215ENST00000375663 CCDC141Q6ZP82 1450 aa20.58■□□□□ 0.89
VARS-215ENST00000375663 THOC2Q8NI27 1593 aaKnown RBP20.58■□□□□ 0.88
VARS-215ENST00000375663 GCC1Q96CN9 775 aa20.58■□□□□ 0.88
VARS-215ENST00000375663 MAGI1Q96QZ7 1491 aaPredicted RBP20.57■□□□□ 0.88
VARS-215ENST00000375663 DISP3Q9P2K9 1392 aa20.57■□□□□ 0.88
VARS-215ENST00000375663 CAVIN1Q6NZI2 390 aaKnown RBP20.57■□□□□ 0.88
VARS-215ENST00000375663 GRPEL1Q9HAV7 217 aa20.56■□□□□ 0.88
VARS-215ENST00000375663 FKBP5Q13451 457 aaPredicted RBP20.55■□□□□ 0.88
VARS-215ENST00000375663 NECTIN2Q92692 538 aa20.55■□□□□ 0.88
VARS-215ENST00000375663 ISY1Q9ULR0 285 aaKnown RBP20.55■□□□□ 0.88
VARS-215ENST00000375663 URB2Q14146 1524 aaKnown RBP20.54■□□□□ 0.88
VARS-215ENST00000375663 HSP90B1P14625 803 aaKnown RBP20.54■□□□□ 0.88
VARS-215ENST00000375663 RABEP1Q15276 862 aa20.54■□□□□ 0.88
VARS-215ENST00000375663 DHX29Q7Z478 1369 aaKnown RBP20.53■□□□□ 0.88
VARS-215ENST00000375663 CHD1LQ86WJ1 897 aa20.53■□□□□ 0.88
VARS-215ENST00000375663 CDK11BP21127 795 aaKnown RBP20.53■□□□□ 0.88
VARS-215ENST00000375663 TWISTNBQ3B726 338 aaPredicted RBP20.53■□□□□ 0.88
VARS-215ENST00000375663 CFAP43Q8NDM7 1665 aa20.53■□□□□ 0.88
VARS-215ENST00000375663 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.53■□□□□ 0.88
VARS-215ENST00000375663 RNF214Q8ND24 703 aa20.52■□□□□ 0.88
VARS-215ENST00000375663 DIAPH3Q9NSV4 1193 aa20.52■□□□□ 0.88
VARS-215ENST00000375663 NSD3Q9BZ95 1437 aa20.52■□□□□ 0.88
VARS-215ENST00000375663 IGHDP01880 384 aa20.52■□□□□ 0.88
VARS-215ENST00000375663 TBC1D2Q9BYX2 928 aa20.52■□□□□ 0.88
VARS-215ENST00000375663 RALGAPBQ86X10 1494 aa20.52■□□□□ 0.88
VARS-215ENST00000375663 K7ELQ4 463 aaPredicted RBP20.51■□□□□ 0.87
VARS-215ENST00000375663 PARD3Q8TEW0 1356 aa20.51■□□□□ 0.87
VARS-215ENST00000375663 TMEM57Q8N5G2 664 aa20.5■□□□□ 0.87
VARS-215ENST00000375663 R3HCC1Q9Y3T6 440 aaKnown RBP20.5■□□□□ 0.87
VARS-215ENST00000375663 GNL2Q13823 731 aaKnown RBP20.5■□□□□ 0.87
VARS-215ENST00000375663 CIZ1Q9ULV3 898 aaPredicted RBP20.5■□□□□ 0.87
VARS-215ENST00000375663 PRPF40AO75400 957 aaKnown RBP20.49■□□□□ 0.87
VARS-215ENST00000375663 TMPOP42166 694 aaKnown RBP20.49■□□□□ 0.87
VARS-215ENST00000375663 NEK4P51957 841 aa20.49■□□□□ 0.87
VARS-215ENST00000375663 TSPYL4Q9UJ04 414 aa20.49■□□□□ 0.87
VARS-215ENST00000375663 GPATCH8Q9UKJ3 1502 aaKnown RBP20.49■□□□□ 0.87
VARS-215ENST00000375663 ESPNB1AK53 854 aa20.49■□□□□ 0.87
VARS-215ENST00000375663 PRAM1Q96QH2 718 aa20.49■□□□□ 0.87
VARS-215ENST00000375663 DNAJC5BQ9UF47 199 aa20.49■□□□□ 0.87
VARS-215ENST00000375663 LAMC3Q9Y6N6 1575 aa20.48■□□□□ 0.87
VARS-215ENST00000375663 TCOF1Q13428 1488 aaKnown RBP20.48■□□□□ 0.87
VARS-215ENST00000375663 EIF2S2P20042 333 aaKnown RBP20.48■□□□□ 0.87
VARS-215ENST00000375663 CCDC173Q0VFZ6 552 aa20.48■□□□□ 0.87
VARS-215ENST00000375663 RUFY2Q8WXA3 655 aa20.48■□□□□ 0.87
VARS-215ENST00000375663 SSH1Q8WYL5 1049 aa20.48■□□□□ 0.87
VARS-215ENST00000375663 CHMP3Q9Y3E7 222 aa20.47■□□□□ 0.87
VARS-215ENST00000375663 ZKSCAN1P17029 563 aaPredicted RBP20.46■□□□□ 0.87
VARS-215ENST00000375663 EID1Q9Y6B2 187 aa20.46■□□□□ 0.87
VARS-215ENST00000375663 MBD3O95983 291 aa20.45■□□□□ 0.86
VARS-215ENST00000375663 SMC3Q9UQE7 1217 aa20.45■□□□□ 0.86
VARS-215ENST00000375663 C8orf34Q49A92 452 aa20.45■□□□□ 0.86
VARS-215ENST00000375663 RNF123Q5XPI4 1314 aa20.44■□□□□ 0.86
VARS-215ENST00000375663 AMER1Q5JTC6 1135 aaPredicted RBP20.44■□□□□ 0.86
VARS-215ENST00000375663 VPS37CA5D8V6 355 aaPredicted RBP20.44■□□□□ 0.86
VARS-215ENST00000375663 CABP1Q9NZU7 370 aa20.44■□□□□ 0.86
VARS-215ENST00000375663 H3BQV1 296 aa20.43■□□□□ 0.86
VARS-215ENST00000375663 TEFQ10587 303 aa20.43■□□□□ 0.86
VARS-215ENST00000375663 IFFO2Q5TF58 517 aa20.43■□□□□ 0.86
VARS-215ENST00000375663 KIF3AQ9Y496 699 aa20.43■□□□□ 0.86
VARS-215ENST00000375663 GRIN2AQ12879 1464 aa20.42■□□□□ 0.86
VARS-215ENST00000375663 C9orf78Q9NZ63 289 aaPredicted RBP20.42■□□□□ 0.86
VARS-215ENST00000375663 TPM2P07951 284 aa20.42■□□□□ 0.86
VARS-215ENST00000375663 CCDC39Q9UFE4 941 aa20.42■□□□□ 0.86
VARS-215ENST00000375663 GOLGA6L19H0YKK7 550 aa20.42■□□□□ 0.86
VARS-215ENST00000375663 TPM4P67936 248 aa20.42■□□□□ 0.86
VARS-215ENST00000375663 ZNF428Q96B54 188 aa20.42■□□□□ 0.86
VARS-215ENST00000375663 TBC1D32Q96NH3 1257 aa20.42■□□□□ 0.86
VARS-215ENST00000375663 GORABQ5T7V8 394 aa20.41■□□□□ 0.86
VARS-215ENST00000375663 FAM184AQ8NB25 1140 aa20.41■□□□□ 0.86
VARS-215ENST00000375663 PER1O15534 1290 aaPredicted RBP20.41■□□□□ 0.86
VARS-215ENST00000375663 TESK2Q96S53 571 aa20.41■□□□□ 0.86
VARS-215ENST00000375663 CWC22Q9HCG8 908 aaKnown RBP20.41■□□□□ 0.86
VARS-215ENST00000375663 KIF14Q15058 1648 aa20.4■□□□□ 0.86
VARS-215ENST00000375663 BECN2A8MW95 431 aa20.4■□□□□ 0.86
VARS-215ENST00000375663 MCM2P49736 904 aa20.4■□□□□ 0.86
VARS-215ENST00000375663 SF3A1Q15459 793 aaKnown RBP20.4■□□□□ 0.86
VARS-215ENST00000375663 ADGRF5Q8IZF2 1346 aa20.4■□□□□ 0.86
VARS-215ENST00000375663 CSB-PGBD3P0DP91 1061 aa20.4■□□□□ 0.86
VARS-215ENST00000375663 IFIT2P09913 472 aaKnown RBP20.4■□□□□ 0.86
VARS-215ENST00000375663 FCHSD2O94868 740 aa20.39■□□□□ 0.86
VARS-215ENST00000375663 ZNF330Q9Y3S2 320 aaPredicted RBP20.39■□□□□ 0.85
VARS-215ENST00000375663 SCAF11Q99590 1463 aaKnown RBP20.39■□□□□ 0.85
VARS-215ENST00000375663 TRIM27P14373 513 aa20.39■□□□□ 0.85
VARS-215ENST00000375663 CDK19Q9BWU1 502 aa20.39■□□□□ 0.85
VARS-215ENST00000375663 PCDHB15Q9Y5E8 787 aa20.39■□□□□ 0.85
VARS-215ENST00000375663 GNAI3P08754 354 aa20.38■□□□□ 0.85
VARS-215ENST00000375663 UBTFL1P0CB47 393 aaPredicted RBP20.38■□□□□ 0.85
VARS-215ENST00000375663 GPRASP1Q5JY77 1395 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms