RNA–Protein interactions for RNA: ENST00000375639.6

C6orf48-204, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C6orf48, Length 712 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-204ENST00000375639 SAFB2Q14151 953 aaKnown RBP eCLIP25.04■■□□□ 1.6
C6orf48-204ENST00000375639 TMEM94Q12767 1356 aa25.04■■□□□ 1.6
C6orf48-204ENST00000375639 LRRC7Q96NW7 1537 aa25.03■■□□□ 1.6
C6orf48-204ENST00000375639 C14orf37Q86TY3 774 aa25.03■■□□□ 1.6
C6orf48-204ENST00000375639 PLEKHH1Q9ULM0 1364 aa25.03■■□□□ 1.6
C6orf48-204ENST00000375639 FAM135BQ49AJ0 1406 aa25.03■■□□□ 1.6
C6orf48-204ENST00000375639 EIF3AQ14152 1382 aaKnown RBP25■■□□□ 1.59
C6orf48-204ENST00000375639 ARHGEF28Q8N1W1 1705 aaKnown RBP25■■□□□ 1.59
C6orf48-204ENST00000375639 USP47Q96K76 1375 aa24.98■■□□□ 1.59
C6orf48-204ENST00000375639 CENPJQ9HC77 1338 aaPredicted RBP24.98■■□□□ 1.59
C6orf48-204ENST00000375639 NCOA3Q9Y6Q9 1424 aa24.95■■□□□ 1.58
C6orf48-204ENST00000375639 MINK1Q8N4C8 1332 aaPredicted RBP24.94■■□□□ 1.58
C6orf48-204ENST00000375639 EIF4G2P78344 907 aaKnown RBP eCLIP24.94■■□□□ 1.58
C6orf48-204ENST00000375639 XIRP1Q702N8 1843 aaKnown RBP24.93■■□□□ 1.58
C6orf48-204ENST00000375639 ST20-MTHFSA0A0A6YYL1 179 aa24.93■■□□□ 1.58
C6orf48-204ENST00000375639 HIRIP3Q9BW71 556 aaPredicted RBP24.92■■□□□ 1.58
C6orf48-204ENST00000375639 C19orf44Q9H6X5 657 aa24.92■■□□□ 1.58
C6orf48-204ENST00000375639 ADGRL3Q9HAR2 1447 aa24.92■■□□□ 1.58
C6orf48-204ENST00000375639 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.92■■□□□ 1.58
C6orf48-204ENST00000375639 MSH6P52701 1360 aa24.92■■□□□ 1.58
C6orf48-204ENST00000375639 HSPA5P11021 654 aaKnown RBP24.9■■□□□ 1.58
C6orf48-204ENST00000375639 QRICH2Q9H0J4 1663 aa24.89■■□□□ 1.58
C6orf48-204ENST00000375639 NALCNQ8IZF0 1738 aa24.89■■□□□ 1.57
C6orf48-204ENST00000375639 RGS17Q9UGC6 210 aaPredicted RBP24.88■■□□□ 1.57
C6orf48-204ENST00000375639 ATF3P18847 181 aa24.87■■□□□ 1.57
C6orf48-204ENST00000375639 CADPS2Q86UW7 1296 aa24.84■■□□□ 1.57
C6orf48-204ENST00000375639 WASLO00401 505 aaPredicted RBP24.83■■□□□ 1.57
C6orf48-204ENST00000375639 TESK2Q96S53 571 aa24.83■■□□□ 1.57
C6orf48-204ENST00000375639 SBNO2Q9Y2G9 1366 aa24.82■■□□□ 1.56
C6orf48-204ENST00000375639 DCCP43146 1447 aa24.81■■□□□ 1.56
C6orf48-204ENST00000375639 NUTM2FA1L443 756 aa24.81■■□□□ 1.56
C6orf48-204ENST00000375639 CDK19Q9BWU1 502 aa24.81■■□□□ 1.56
C6orf48-204ENST00000375639 EVC2Q86UK5 1308 aa24.81■■□□□ 1.56
C6orf48-204ENST00000375639 ADGRB2O60241 1585 aa24.8■■□□□ 1.56
C6orf48-204ENST00000375639 CDC42BPGQ6DT37 1551 aa24.8■■□□□ 1.56
C6orf48-204ENST00000375639 SLC24A1O60721 1099 aa24.79■■□□□ 1.56
C6orf48-204ENST00000375639 SRPK2P78362 688 aaKnown RBP24.79■■□□□ 1.56
C6orf48-204ENST00000375639 TMF1P82094 1093 aa24.78■■□□□ 1.56
C6orf48-204ENST00000375639 TULP4Q9NRJ4 1543 aa24.76■■□□□ 1.55
C6orf48-204ENST00000375639 CABP2Q9NPB3 220 aa24.76■■□□□ 1.55
C6orf48-204ENST00000375639 SLAIN2Q9P270 581 aa24.75■■□□□ 1.55
C6orf48-204ENST00000375639 FMN2Q9NZ56 1722 aa24.75■■□□□ 1.55
C6orf48-204ENST00000375639 MST1RQ04912 1400 aa24.73■■□□□ 1.55
C6orf48-204ENST00000375639 NUDT16Q96DE0 195 aaKnown RBP24.72■■□□□ 1.55
C6orf48-204ENST00000375639 C1orf167Q5SNV9 1468 aa24.7■■□□□ 1.55
C6orf48-204ENST00000375639 PRR36Q9H6K5 1346 aa24.7■■□□□ 1.54
C6orf48-204ENST00000375639 ANKARQ7Z5J8 1434 aa24.69■■□□□ 1.54
C6orf48-204ENST00000375639 CDCA8Q53HL2 280 aa24.69■■□□□ 1.54
C6orf48-204ENST00000375639 ESCO1Q5FWF5 840 aa24.69■■□□□ 1.54
C6orf48-204ENST00000375639 POTEAQ6S8J7 498 aa24.69■■□□□ 1.54
C6orf48-204ENST00000375639 POLR3GLQ9BT43 218 aa24.69■■□□□ 1.54
C6orf48-204ENST00000375639 ORAI2Q96SN7 254 aa24.68■■□□□ 1.54
C6orf48-204ENST00000375639 CCDC61Q9Y6R9 512 aa24.67■■□□□ 1.54
C6orf48-204ENST00000375639 ATP7BP35670 1465 aa24.66■■□□□ 1.54
C6orf48-204ENST00000375639 USP32Q8NFA0 1604 aa24.66■■□□□ 1.54
C6orf48-204ENST00000375639 PUS7Q96PZ0 661 aaKnown RBP24.66■■□□□ 1.54
C6orf48-204ENST00000375639 RGPD8O14715 1765 aaPredicted RBP24.66■■□□□ 1.54
C6orf48-204ENST00000375639 C11orf95C9JLR9 678 aaPredicted RBP24.65■■□□□ 1.54
C6orf48-204ENST00000375639 ATAD2Q6PL18 1390 aa24.65■■□□□ 1.54
C6orf48-204ENST00000375639 PHF8Q9UPP1 1060 aa24.64■■□□□ 1.54
C6orf48-204ENST00000375639 BRINP3Q76B58 766 aa24.63■■□□□ 1.53
C6orf48-204ENST00000375639 PMFBP1Q8TBY8 1022 aa24.63■■□□□ 1.53
C6orf48-204ENST00000375639 TMC1Q8TDI8 760 aa24.62■■□□□ 1.53
C6orf48-204ENST00000375639 CABP1Q9NZU7 370 aa24.62■■□□□ 1.53
C6orf48-204ENST00000375639 PPIP5K1Q6PFW1 1433 aa24.61■■□□□ 1.53
C6orf48-204ENST00000375639 ITSN1Q15811 1721 aa24.59■■□□□ 1.53
C6orf48-204ENST00000375639 NGDNQ8NEJ9 315 aaKnown RBP24.59■■□□□ 1.53
C6orf48-204ENST00000375639 KIF7Q2M1P5 1343 aa24.59■■□□□ 1.53
C6orf48-204ENST00000375639 ROBO1Q9Y6N7 1651 aa24.58■■□□□ 1.53
C6orf48-204ENST00000375639 PLEKHG3A1L390 1219 aa24.57■■□□□ 1.52
C6orf48-204ENST00000375639 FOXO3O43524 673 aa24.57■■□□□ 1.52
C6orf48-204ENST00000375639 SLC12A5Q9H2X9 1139 aa24.57■■□□□ 1.52
C6orf48-204ENST00000375639 TOPAZ1Q8N9V7 1692 aa24.56■■□□□ 1.52
C6orf48-204ENST00000375639 DDX17Q92841 729 aaKnown RBP24.55■■□□□ 1.52
C6orf48-204ENST00000375639 ACEP12821 1306 aa24.55■■□□□ 1.52
C6orf48-204ENST00000375639 WASHC2AQ641Q2 1341 aa24.55■■□□□ 1.52
C6orf48-204ENST00000375639 CCDC7Q96M83 1385 aa24.54■■□□□ 1.52
C6orf48-204ENST00000375639 KIF1AQ12756 1690 aa24.54■■□□□ 1.52
C6orf48-204ENST00000375639 PSME1Q06323 249 aa24.52■■□□□ 1.52
C6orf48-204ENST00000375639 NPHP3Q7Z494 1330 aa24.52■■□□□ 1.52
C6orf48-204ENST00000375639 NINLQ9Y2I6 1382 aa24.52■■□□□ 1.52
C6orf48-204ENST00000375639 XPCQ01831 940 aaPredicted RBP24.51■■□□□ 1.51
C6orf48-204ENST00000375639 HDGFL2Q7Z4V5 671 aaPredicted RBP24.5■■□□□ 1.51
C6orf48-204ENST00000375639 TERF2IPQ9NYB0 399 aa24.5■■□□□ 1.51
C6orf48-204ENST00000375639 POLR3AO14802 1390 aaPredicted RBP24.5■■□□□ 1.51
C6orf48-204ENST00000375639 ZNF316A6NFI3 1004 aaPredicted RBP24.49■■□□□ 1.51
C6orf48-204ENST00000375639 KRT28Q7Z3Y7 464 aa24.49■■□□□ 1.51
C6orf48-204ENST00000375639 ZNF692Q9BU19 519 aaPredicted RBP24.48■■□□□ 1.51
C6orf48-204ENST00000375639 NHSL1Q5SYE7 1610 aa24.46■■□□□ 1.51
C6orf48-204ENST00000375639 MYOM1P52179 1685 aa24.46■■□□□ 1.51
C6orf48-204ENST00000375639 KTN1Q86UP2 1357 aaKnown RBP24.45■■□□□ 1.5
C6orf48-204ENST00000375639 AHDC1Q5TGY3 1603 aaPredicted RBP24.45■■□□□ 1.5
C6orf48-204ENST00000375639 CD163L1Q9NR16 1453 aa24.45■■□□□ 1.5
C6orf48-204ENST00000375639 CPSF1Q10570 1443 aaKnown RBP24.44■■□□□ 1.5
C6orf48-204ENST00000375639 A0A1W2PP64 1363 aa24.44■■□□□ 1.5
C6orf48-204ENST00000375639 ANKRD36BQ8N2N9 1353 aa24.44■■□□□ 1.5
C6orf48-204ENST00000375639 SOS2Q07890 1332 aaPredicted RBP24.44■■□□□ 1.5
C6orf48-204ENST00000375639 PAK3O75914 559 aaPredicted RBP24.43■■□□□ 1.5
C6orf48-204ENST00000375639 PANK3Q9H999 370 aa24.43■■□□□ 1.5
C6orf48-204ENST00000375639 PHLPP1O60346 1717 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms