RNA–Protein interactions for RNA: ENST00000375618.8

C11orf88-202, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C11orf88, Length 712 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-202ENST00000375618 TRAK1Q9UPV9 953 aa23.07■■□□□ 1.28
C11orf88-202ENST00000375618 CDC42BPGQ6DT37 1551 aa23.06■■□□□ 1.28
C11orf88-202ENST00000375618 NBPF8Q3BBV2 869 aa23.05■■□□□ 1.28
C11orf88-202ENST00000375618 SAFB2Q14151 953 aaKnown RBP eCLIP23.04■■□□□ 1.28
C11orf88-202ENST00000375618 BRINP3Q76B58 766 aa23.04■■□□□ 1.28
C11orf88-202ENST00000375618 TRPM1Q7Z4N2 1603 aa23.03■■□□□ 1.28
C11orf88-202ENST00000375618 C1orf167Q5SNV9 1468 aa23.03■■□□□ 1.28
C11orf88-202ENST00000375618 ARHGEF28Q8N1W1 1705 aaKnown RBP23.02■■□□□ 1.28
C11orf88-202ENST00000375618 TONSLQ96HA7 1378 aa23.01■■□□□ 1.27
C11orf88-202ENST00000375618 ORAI2Q96SN7 254 aa22.98■■□□□ 1.27
C11orf88-202ENST00000375618 POGKQ9P215 609 aa22.98■■□□□ 1.27
C11orf88-202ENST00000375618 FMN2Q9NZ56 1722 aa22.98■■□□□ 1.27
C11orf88-202ENST00000375618 AHDC1Q5TGY3 1603 aaPredicted RBP22.97■■□□□ 1.27
C11orf88-202ENST00000375618 PHLPP1O60346 1717 aa22.97■■□□□ 1.27
C11orf88-202ENST00000375618 NUTM2FA1L443 756 aa22.97■■□□□ 1.27
C11orf88-202ENST00000375618 DDX17Q92841 729 aaKnown RBP22.97■■□□□ 1.27
C11orf88-202ENST00000375618 COL16A1Q07092 1604 aaPredicted RBP22.97■■□□□ 1.27
C11orf88-202ENST00000375618 ADGRB2O60241 1585 aa22.96■■□□□ 1.27
C11orf88-202ENST00000375618 MINK1Q8N4C8 1332 aaPredicted RBP22.94■■□□□ 1.26
C11orf88-202ENST00000375618 HIRIP3Q9BW71 556 aaPredicted RBP22.94■■□□□ 1.26
C11orf88-202ENST00000375618 NHSL1Q5SYE7 1610 aa22.93■■□□□ 1.26
C11orf88-202ENST00000375618 CLSPNQ9HAW4 1339 aa22.91■■□□□ 1.26
C11orf88-202ENST00000375618 USP32Q8NFA0 1604 aa22.91■■□□□ 1.26
C11orf88-202ENST00000375618 ROCK2O75116 1388 aaKnown RBP22.9■■□□□ 1.26
C11orf88-202ENST00000375618 GPRASP1Q5JY77 1395 aa22.89■■□□□ 1.26
C11orf88-202ENST00000375618 RALGAPBQ86X10 1494 aa22.89■■□□□ 1.25
C11orf88-202ENST00000375618 RGPD8O14715 1765 aaPredicted RBP22.89■■□□□ 1.25
C11orf88-202ENST00000375618 ESCO1Q5FWF5 840 aa22.88■■□□□ 1.25
C11orf88-202ENST00000375618 CCER1Q8TC90 406 aaPredicted RBP22.88■■□□□ 1.25
C11orf88-202ENST00000375618 PRR36Q9H6K5 1346 aa22.87■■□□□ 1.25
C11orf88-202ENST00000375618 MED1Q15648 1581 aaPredicted RBP22.86■■□□□ 1.25
C11orf88-202ENST00000375618 WASLO00401 505 aaPredicted RBP22.85■■□□□ 1.25
C11orf88-202ENST00000375618 CENPJQ9HC77 1338 aaPredicted RBP22.83■■□□□ 1.25
C11orf88-202ENST00000375618 ANKARQ7Z5J8 1434 aa22.83■■□□□ 1.25
C11orf88-202ENST00000375618 TULP4Q9NRJ4 1543 aa22.83■■□□□ 1.25
C11orf88-202ENST00000375618 QRICH2Q9H0J4 1663 aa22.83■■□□□ 1.24
C11orf88-202ENST00000375618 SOS2Q07890 1332 aaPredicted RBP22.82■■□□□ 1.24
C11orf88-202ENST00000375618 JCADQ9P266 1359 aa22.82■■□□□ 1.24
C11orf88-202ENST00000375618 PXDNQ92626 1479 aa22.81■■□□□ 1.24
C11orf88-202ENST00000375618 FOXO3O43524 673 aa22.81■■□□□ 1.24
C11orf88-202ENST00000375618 XPCQ01831 940 aaPredicted RBP22.8■■□□□ 1.24
C11orf88-202ENST00000375618 CARD11Q9BXL7 1154 aa22.8■■□□□ 1.24
C11orf88-202ENST00000375618 ATP7BP35670 1465 aa22.79■■□□□ 1.24
C11orf88-202ENST00000375618 KIF1AQ12756 1690 aa22.79■■□□□ 1.24
C11orf88-202ENST00000375618 SHPRHQ149N8 1683 aa22.79■■□□□ 1.24
C11orf88-202ENST00000375618 CDK19Q9BWU1 502 aa22.79■■□□□ 1.24
C11orf88-202ENST00000375618 PHF8Q9UPP1 1060 aa22.79■■□□□ 1.24
C11orf88-202ENST00000375618 LRP6O75581 1613 aa22.77■■□□□ 1.24
C11orf88-202ENST00000375618 PNPLA6Q8IY17 1366 aa22.76■■□□□ 1.23
C11orf88-202ENST00000375618 PMFBP1Q8TBY8 1022 aa22.76■■□□□ 1.23
C11orf88-202ENST00000375618 TIMELESSQ9UNS1 1208 aa22.76■■□□□ 1.23
C11orf88-202ENST00000375618 NPHP3Q7Z494 1330 aa22.76■■□□□ 1.23
C11orf88-202ENST00000375618 DISP3Q9P2K9 1392 aa22.76■■□□□ 1.23
C11orf88-202ENST00000375618 LRRC59Q96AG4 307 aaKnown RBP22.75■■□□□ 1.23
C11orf88-202ENST00000375618 EIF3AQ14152 1382 aaKnown RBP22.75■■□□□ 1.23
C11orf88-202ENST00000375618 NUDT16Q96DE0 195 aaKnown RBP22.74■■□□□ 1.23
C11orf88-202ENST00000375618 TOPAZ1Q8N9V7 1692 aa22.74■■□□□ 1.23
C11orf88-202ENST00000375618 CABP2Q9NPB3 220 aa22.72■■□□□ 1.23
C11orf88-202ENST00000375618 KRT28Q7Z3Y7 464 aa22.71■■□□□ 1.23
C11orf88-202ENST00000375618 SPATA31A6Q5VVP1 1343 aa22.7■■□□□ 1.22
C11orf88-202ENST00000375618 ITSN1Q15811 1721 aa22.68■■□□□ 1.22
C11orf88-202ENST00000375618 SRPK2P78362 688 aaKnown RBP22.68■■□□□ 1.22
C11orf88-202ENST00000375618 SBNO2Q9Y2G9 1366 aa22.67■■□□□ 1.22
C11orf88-202ENST00000375618 SPATA31A3Q5VYP0 1347 aa22.67■■□□□ 1.22
C11orf88-202ENST00000375618 NUTM2BA6NNL0 878 aaPredicted RBP22.67■■□□□ 1.22
C11orf88-202ENST00000375618 NUTM2EB1AL46 878 aaPredicted RBP22.67■■□□□ 1.22
C11orf88-202ENST00000375618 NUTM2AQ8IVF1 878 aaPredicted RBP22.67■■□□□ 1.22
C11orf88-202ENST00000375618 TRPM3Q9HCF6 1732 aaPredicted RBP22.67■■□□□ 1.22
C11orf88-202ENST00000375618 COL22A1Q8NFW1 1626 aaPredicted RBP22.67■■□□□ 1.22
C11orf88-202ENST00000375618 RGS17Q9UGC6 210 aaPredicted RBP22.66■■□□□ 1.22
C11orf88-202ENST00000375618 CCDC61Q9Y6R9 512 aa22.66■■□□□ 1.22
C11orf88-202ENST00000375618 EVC2Q86UK5 1308 aa22.64■■□□□ 1.22
C11orf88-202ENST00000375618 ST20-MTHFSA0A0A6YYL1 179 aa22.64■■□□□ 1.21
C11orf88-202ENST00000375618 PSME1Q06323 249 aa22.64■■□□□ 1.21
C11orf88-202ENST00000375618 TESK2Q96S53 571 aa22.64■■□□□ 1.21
C11orf88-202ENST00000375618 TNS3Q68CZ2 1445 aa22.64■■□□□ 1.21
C11orf88-202ENST00000375618 SBNO1A3KN83 1393 aa22.63■■□□□ 1.21
C11orf88-202ENST00000375618 USP47Q96K76 1375 aa22.63■■□□□ 1.21
C11orf88-202ENST00000375618 PLEKHG3A1L390 1219 aa22.63■■□□□ 1.21
C11orf88-202ENST00000375618 PPIP5K1Q6PFW1 1433 aa22.63■■□□□ 1.21
C11orf88-202ENST00000375618 POLR3AO14802 1390 aaPredicted RBP22.63■■□□□ 1.21
C11orf88-202ENST00000375618 NGDNQ8NEJ9 315 aaKnown RBP22.62■■□□□ 1.21
C11orf88-202ENST00000375618 ACEP12821 1306 aa22.61■■□□□ 1.21
C11orf88-202ENST00000375618 ILDR2Q71H61 639 aa22.61■■□□□ 1.21
C11orf88-202ENST00000375618 PHF23Q9BUL5 403 aaPredicted RBP22.6■■□□□ 1.21
C11orf88-202ENST00000375618 ALS2Q96Q42 1657 aa22.59■■□□□ 1.21
C11orf88-202ENST00000375618 CABP1Q9NZU7 370 aa22.59■■□□□ 1.21
C11orf88-202ENST00000375618 ADAMTS2O95450 1211 aa22.56■■□□□ 1.2
C11orf88-202ENST00000375618 MEX3CQ5U5Q3 659 aaKnown RBP22.56■■□□□ 1.2
C11orf88-202ENST00000375618 CABLES1Q8TDN4 633 aa22.56■■□□□ 1.2
C11orf88-202ENST00000375618 PLEKHG5O94827 1062 aa22.55■■□□□ 1.2
C11orf88-202ENST00000375618 ABCA3Q99758 1704 aa22.54■■□□□ 1.2
C11orf88-202ENST00000375618 LMOD2Q6P5Q4 547 aa22.54■■□□□ 1.2
C11orf88-202ENST00000375618 ATAD2Q6PL18 1390 aa22.53■■□□□ 1.2
C11orf88-202ENST00000375618 POTEAQ6S8J7 498 aa22.53■■□□□ 1.2
C11orf88-202ENST00000375618 ARHGEF10O15013 1369 aa22.52■■□□□ 1.2
C11orf88-202ENST00000375618 PAK3O75914 559 aaPredicted RBP22.52■■□□□ 1.2
C11orf88-202ENST00000375618 USP6P35125 1406 aa22.51■■□□□ 1.19
C11orf88-202ENST00000375618 C8orf37Q96NL8 207 aa22.51■■□□□ 1.19
C11orf88-202ENST00000375618 CRYBG1Q9Y4K1 1723 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms