RNA–Protein interactions for RNA: ENST00000375001.7

COL15A1-201, Transcript of collagen type XV alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL15A1, Length 5,496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-201ENST00000375001 UQCRHLA0A096LP55 91 aa23.86■■□□□ 1.41
COL15A1-201ENST00000375001 UQCRHP07919 91 aa23.86■■□□□ 1.41
COL15A1-201ENST00000375001 AMPHP49418 695 aa23.86■■□□□ 1.41
COL15A1-201ENST00000375001 ADAMTS8Q9UP79 889 aa23.86■■□□□ 1.41
COL15A1-201ENST00000375001 MYOM3Q5VTT5 1437 aa23.86■■□□□ 1.41
COL15A1-201ENST00000375001 RNF20Q5VTR2 975 aa23.85■■□□□ 1.41
COL15A1-201ENST00000375001 SDF4Q9BRK5 362 aa23.85■■□□□ 1.41
COL15A1-201ENST00000375001 PRPF40AO75400 957 aaKnown RBP23.85■■□□□ 1.41
COL15A1-201ENST00000375001 MPNDQ8N594 471 aa23.85■■□□□ 1.41
COL15A1-201ENST00000375001 SPC24Q8NBT2 197 aa23.84■■□□□ 1.41
COL15A1-201ENST00000375001 AKNAQ7Z591 1439 aa23.83■■□□□ 1.41
COL15A1-201ENST00000375001 RIPK4P57078 832 aa23.83■■□□□ 1.41
COL15A1-201ENST00000375001 NGEFQ8N5V2 710 aa23.83■■□□□ 1.41
COL15A1-201ENST00000375001 MBD3O95983 291 aa23.83■■□□□ 1.4
COL15A1-201ENST00000375001 EVC2Q86UK5 1308 aa23.83■■□□□ 1.4
COL15A1-201ENST00000375001 BRD4O60885 1362 aaPredicted RBP23.82■■□□□ 1.4
COL15A1-201ENST00000375001 OLFM4Q6UX06 510 aa23.82■■□□□ 1.4
COL15A1-201ENST00000375001 NGDNQ8NEJ9 315 aaKnown RBP23.82■■□□□ 1.4
COL15A1-201ENST00000375001 TMX4Q9H1E5 349 aaPredicted RBP23.82■■□□□ 1.4
COL15A1-201ENST00000375001 RUNDC1Q96C34 613 aa23.82■■□□□ 1.4
COL15A1-201ENST00000375001 IFIT2P09913 472 aaKnown RBP23.82■■□□□ 1.4
COL15A1-201ENST00000375001 SMC2O95347 1197 aa23.81■■□□□ 1.4
COL15A1-201ENST00000375001 CCDC27Q2M243 656 aa23.8■■□□□ 1.4
COL15A1-201ENST00000375001 CT47B1P0C2W7 299 aaPredicted RBP23.8■■□□□ 1.4
COL15A1-201ENST00000375001 LETM1O95202 739 aaPredicted RBP23.8■■□□□ 1.4
COL15A1-201ENST00000375001 ERICH4A6NGS2 130 aa23.79■■□□□ 1.4
COL15A1-201ENST00000375001 CCDC112Q8NEF3 446 aa23.79■■□□□ 1.4
COL15A1-201ENST00000375001 FMNL2Q96PY5 1086 aa23.79■■□□□ 1.4
COL15A1-201ENST00000375001 CT47A1Q5JQC4 288 aaPredicted RBP23.79■■□□□ 1.4
COL15A1-201ENST00000375001 MINK1Q8N4C8 1332 aaPredicted RBP23.78■■□□□ 1.4
COL15A1-201ENST00000375001 GRPEL1Q9HAV7 217 aa23.78■■□□□ 1.4
COL15A1-201ENST00000375001 G3V3G9 751 aa23.78■■□□□ 1.4
COL15A1-201ENST00000375001 DCAF8Q5TAQ9 597 aa23.78■■□□□ 1.4
COL15A1-201ENST00000375001 DIAPH1O60610 1272 aaKnown RBP23.78■■□□□ 1.4
COL15A1-201ENST00000375001 LRRFIP1Q32MZ4 808 aaKnown RBP23.78■■□□□ 1.4
COL15A1-201ENST00000375001 CCDC184Q52MB2 194 aa23.78■■□□□ 1.4
COL15A1-201ENST00000375001 DHX37Q8IY37 1157 aaKnown RBP23.78■■□□□ 1.4
COL15A1-201ENST00000375001 RRBP1Q9P2E9 1410 aaKnown RBP23.77■■□□□ 1.4
COL15A1-201ENST00000375001 KIAA0754O94854 1291 aa23.77■■□□□ 1.4
COL15A1-201ENST00000375001 ESPNB1AK53 854 aa23.77■■□□□ 1.4
COL15A1-201ENST00000375001 TRDNQ13061 729 aa23.77■■□□□ 1.4
COL15A1-201ENST00000375001 NFXL1Q6ZNB6 911 aa23.77■■□□□ 1.4
COL15A1-201ENST00000375001 OFD1O75665 1012 aa23.77■■□□□ 1.39
COL15A1-201ENST00000375001 CDC45O75419 566 aa23.76■■□□□ 1.39
COL15A1-201ENST00000375001 C9orf78Q9NZ63 289 aaPredicted RBP23.76■■□□□ 1.39
COL15A1-201ENST00000375001 COG3Q96JB2 828 aa23.75■■□□□ 1.39
COL15A1-201ENST00000375001 API5Q9BZZ5 524 aaKnown RBP23.75■■□□□ 1.39
COL15A1-201ENST00000375001 CCP110O43303 1012 aa23.74■■□□□ 1.39
COL15A1-201ENST00000375001 GTF2E1P29083 439 aaPredicted RBP23.74■■□□□ 1.39
COL15A1-201ENST00000375001 ARAP1Q96P48 1450 aa23.74■■□□□ 1.39
COL15A1-201ENST00000375001 SAFBQ15424 915 aaKnown RBP eCLIP23.73■■□□□ 1.39
COL15A1-201ENST00000375001 HSP90AB2PQ58FF8 381 aa23.73■■□□□ 1.39
COL15A1-201ENST00000375001 BACH2Q9BYV9 841 aa23.73■■□□□ 1.39
COL15A1-201ENST00000375001 DEF6Q9H4E7 631 aa23.73■■□□□ 1.39
COL15A1-201ENST00000375001 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.73■■□□□ 1.39
COL15A1-201ENST00000375001 FANCD2Q9BXW9 1451 aa23.73■■□□□ 1.39
COL15A1-201ENST00000375001 VGFO15240 615 aaPredicted RBP23.73■■□□□ 1.39
COL15A1-201ENST00000375001 RAD21O60216 631 aa23.72■■□□□ 1.39
COL15A1-201ENST00000375001 PRDM10Q9NQV6 1147 aa23.72■■□□□ 1.39
COL15A1-201ENST00000375001 CUX1P39880 1505 aa23.71■■□□□ 1.39
COL15A1-201ENST00000375001 EIF2S2P20042 333 aaKnown RBP23.71■■□□□ 1.39
COL15A1-201ENST00000375001 FIBPO43427 364 aa23.71■■□□□ 1.39
COL15A1-201ENST00000375001 NECTIN2Q92692 538 aa23.71■■□□□ 1.39
COL15A1-201ENST00000375001 DHX16O60231 1041 aaKnown RBP23.7■■□□□ 1.39
COL15A1-201ENST00000375001 KINO60870 393 aaKnown RBP23.7■■□□□ 1.39
COL15A1-201ENST00000375001 ODF2Q5BJF6 829 aa23.7■■□□□ 1.39
COL15A1-201ENST00000375001 MIA2Q96PC5 1412 aa23.7■■□□□ 1.38
COL15A1-201ENST00000375001 FGD5Q6ZNL6 1462 aa23.7■■□□□ 1.38
COL15A1-201ENST00000375001 NBPF8Q3BBV2 869 aa23.7■■□□□ 1.38
COL15A1-201ENST00000375001 NCOA2Q15596 1464 aa23.7■■□□□ 1.38
COL15A1-201ENST00000375001 TCEAL9Q9UHQ7 104 aa23.69■■□□□ 1.38
COL15A1-201ENST00000375001 USP8P40818 1118 aa23.68■■□□□ 1.38
COL15A1-201ENST00000375001 NEK4P51957 841 aa23.68■■□□□ 1.38
COL15A1-201ENST00000375001 ZFYVE27Q5T4F4 411 aa23.68■■□□□ 1.38
COL15A1-201ENST00000375001 TAF3Q5VWG9 929 aa23.68■■□□□ 1.38
COL15A1-201ENST00000375001 MYO6Q9UM54 1294 aa23.68■■□□□ 1.38
COL15A1-201ENST00000375001 NEXNQ0ZGT2 675 aa23.67■■□□□ 1.38
COL15A1-201ENST00000375001 PNISRQ8TF01 805 aaKnown RBP23.67■■□□□ 1.38
COL15A1-201ENST00000375001 BRPF1P55201 1214 aaPredicted RBP23.67■■□□□ 1.38
COL15A1-201ENST00000375001 PDZRN3Q9UPQ7 1066 aa23.67■■□□□ 1.38
COL15A1-201ENST00000375001 AEBP1Q8IUX7 1158 aa23.66■■□□□ 1.38
COL15A1-201ENST00000375001 G3BP1Q13283 466 aaKnown RBP eCLIP23.66■■□□□ 1.38
COL15A1-201ENST00000375001 AAMPQ13685 434 aa23.66■■□□□ 1.38
COL15A1-201ENST00000375001 PDCL2Q8N4E4 241 aa23.66■■□□□ 1.38
COL15A1-201ENST00000375001 PPP2R1AP30153 589 aa23.66■■□□□ 1.38
COL15A1-201ENST00000375001 SMARCE1Q969G3 411 aa23.66■■□□□ 1.38
COL15A1-201ENST00000375001 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.66■■□□□ 1.38
COL15A1-201ENST00000375001 ANKRD50Q9ULJ7 1429 aa23.65■■□□□ 1.38
COL15A1-201ENST00000375001 RAD54L2Q9Y4B4 1467 aa23.65■■□□□ 1.38
COL15A1-201ENST00000375001 TCP11L2Q8N4U5 519 aa23.65■■□□□ 1.38
COL15A1-201ENST00000375001 GOLGA6L7A0A1B0GV03 622 aa23.65■■□□□ 1.38
COL15A1-201ENST00000375001 ERICH2A1L162 156 aa23.65■■□□□ 1.38
COL15A1-201ENST00000375001 EPS15P42566 896 aa23.65■■□□□ 1.38
COL15A1-201ENST00000375001 FAM177A1Q8N128 213 aaPredicted RBP23.65■■□□□ 1.38
COL15A1-201ENST00000375001 HMOX1P09601 288 aa23.64■■□□□ 1.38
COL15A1-201ENST00000375001 FKBP5Q13451 457 aaPredicted RBP23.64■■□□□ 1.38
COL15A1-201ENST00000375001 BCAR3O75815 825 aa23.64■■□□□ 1.38
COL15A1-201ENST00000375001 EIF3JO75822 258 aaKnown RBP23.64■■□□□ 1.38
COL15A1-201ENST00000375001 CENPHQ9H3R5 247 aa23.64■■□□□ 1.38
COL15A1-201ENST00000375001 MSH5O43196 834 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms