RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 MYRIPQ8NFW9 859 aa12.35□□□□□ -0.43
CD28-202ENST00000374481 UNC13AQ9UPW8 1703 aa12.35□□□□□ -0.43
CD28-202ENST00000374481 TNNT1P13805 278 aa12.35□□□□□ -0.43
CD28-202ENST00000374481 RNF123Q5XPI4 1314 aa12.35□□□□□ -0.43
CD28-202ENST00000374481 ACBD3Q9H3P7 528 aa12.35□□□□□ -0.43
CD28-202ENST00000374481 INTS3Q68E01 1043 aaKnown RBP12.34□□□□□ -0.43
CD28-202ENST00000374481 POLR3GO15318 223 aaPredicted RBP12.34□□□□□ -0.43
CD28-202ENST00000374481 RBM25P49756 843 aaKnown RBP12.34□□□□□ -0.43
CD28-202ENST00000374481 NBPF8Q3BBV2 869 aa12.34□□□□□ -0.43
CD28-202ENST00000374481 ZNF830Q96NB3 372 aaPredicted RBP12.34□□□□□ -0.43
CD28-202ENST00000374481 PRXQ9BXM0 1461 aa12.34□□□□□ -0.43
CD28-202ENST00000374481 U2AF2P26368 475 aaKnown RBP eCLIP12.34□□□□□ -0.43
CD28-202ENST00000374481 HAP1P54257 671 aaPredicted RBP12.34□□□□□ -0.43
CD28-202ENST00000374481 HSP90AB3PQ58FF7 597 aa12.34□□□□□ -0.43
CD28-202ENST00000374481 RTF1Q92541 710 aaKnown RBP12.34□□□□□ -0.43
CD28-202ENST00000374481 CLGNO14967 610 aa12.34□□□□□ -0.43
CD28-202ENST00000374481 GABPB1Q06547 395 aaPredicted RBP12.34□□□□□ -0.43
CD28-202ENST00000374481 CTR9Q6PD62 1173 aa12.34□□□□□ -0.43
CD28-202ENST00000374481 C16orf45Q96MC5 204 aaPredicted RBP12.34□□□□□ -0.43
CD28-202ENST00000374481 SKIDA1Q1XH10 827 aa12.33□□□□□ -0.44
CD28-202ENST00000374481 TOMM22Q9NS69 142 aa12.33□□□□□ -0.44
CD28-202ENST00000374481 ANKRD30AQ9BXX3 1397 aa12.33□□□□□ -0.44
CD28-202ENST00000374481 TMCO3Q6UWJ1 677 aa12.33□□□□□ -0.44
CD28-202ENST00000374481 PEG3Q9GZU2 1588 aa12.33□□□□□ -0.44
CD28-202ENST00000374481 RNF20Q5VTR2 975 aa12.33□□□□□ -0.44
CD28-202ENST00000374481 STAC3Q96MF2 364 aa12.32□□□□□ -0.44
CD28-202ENST00000374481 TAOK2Q9UL54 1235 aa12.32□□□□□ -0.44
CD28-202ENST00000374481 LMOD3Q0VAK6 560 aa12.32□□□□□ -0.44
CD28-202ENST00000374481 CERS3Q8IU89 383 aa12.32□□□□□ -0.44
CD28-202ENST00000374481 RASSF4Q9H2L5 321 aa12.32□□□□□ -0.44
CD28-202ENST00000374481 SEC24BO95487 1268 aa12.32□□□□□ -0.44
CD28-202ENST00000374481 RBM27Q9P2N5 1060 aaKnown RBP12.32□□□□□ -0.44
CD28-202ENST00000374481 CCDC192P0DO97 292 aa12.31□□□□□ -0.44
CD28-202ENST00000374481 PRIM1P49642 420 aaKnown RBP12.31□□□□□ -0.44
CD28-202ENST00000374481 BRD2P25440 801 aaKnown RBP12.31□□□□□ -0.44
CD28-202ENST00000374481 BMS1Q14692 1282 aaKnown RBP12.31□□□□□ -0.44
CD28-202ENST00000374481 BICD2Q8TD16 824 aa12.31□□□□□ -0.44
CD28-202ENST00000374481 BICRAQ9NZM4 1560 aa12.31□□□□□ -0.44
CD28-202ENST00000374481 ADCY5O95622 1261 aa12.31□□□□□ -0.44
CD28-202ENST00000374481 NEK4P51957 841 aa12.31□□□□□ -0.44
CD28-202ENST00000374481 LRSAM1Q6UWE0 723 aa12.31□□□□□ -0.44
CD28-202ENST00000374481 GIMAP7Q8NHV1 300 aa12.31□□□□□ -0.44
CD28-202ENST00000374481 TSC1Q92574 1164 aa12.31□□□□□ -0.44
CD28-202ENST00000374481 UBXN4Q92575 508 aa12.31□□□□□ -0.44
CD28-202ENST00000374481 TTC12Q9H892 705 aaPredicted RBP12.31□□□□□ -0.44
CD28-202ENST00000374481 FIBPO43427 364 aa12.3□□□□□ -0.44
CD28-202ENST00000374481 IGHDP01880 384 aa12.3□□□□□ -0.44
CD28-202ENST00000374481 ZNF500O60304 480 aaPredicted RBP12.3□□□□□ -0.44
CD28-202ENST00000374481 OS9Q13438 667 aaPredicted RBP12.3□□□□□ -0.44
CD28-202ENST00000374481 VPS37CA5D8V6 355 aaPredicted RBP12.3□□□□□ -0.44
CD28-202ENST00000374481 HMMRO75330 724 aa12.3□□□□□ -0.44
CD28-202ENST00000374481 NINLQ9Y2I6 1382 aa12.3□□□□□ -0.44
CD28-202ENST00000374481 PTPN14Q15678 1187 aa12.29□□□□□ -0.44
CD28-202ENST00000374481 C10orf67Q8IYJ2 551 aa12.29□□□□□ -0.44
CD28-202ENST00000374481 TXLNBQ8N3L3 684 aa12.29□□□□□ -0.44
CD28-202ENST00000374481 PPP1R9BQ96SB3 815 aa12.29□□□□□ -0.44
CD28-202ENST00000374481 SMC3Q9UQE7 1217 aa12.29□□□□□ -0.44
CD28-202ENST00000374481 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.29□□□□□ -0.44
CD28-202ENST00000374481 RIPK4P57078 832 aa12.29□□□□□ -0.44
CD28-202ENST00000374481 ANO2Q9NQ90 1003 aa12.28□□□□□ -0.44
CD28-202ENST00000374481 NCOA1Q15788 1441 aa12.28□□□□□ -0.44
CD28-202ENST00000374481 MCM2P49736 904 aa12.28□□□□□ -0.44
CD28-202ENST00000374481 SRPK2P78362 688 aaKnown RBP12.28□□□□□ -0.44
CD28-202ENST00000374481 AXDND1Q5T1B0 1012 aaPredicted RBP12.28□□□□□ -0.44
CD28-202ENST00000374481 KIF18AQ8NI77 898 aa12.28□□□□□ -0.44
CD28-202ENST00000374481 ERBB4Q15303 1308 aa12.27□□□□□ -0.44
CD28-202ENST00000374481 RILPL2Q969X0 211 aa12.27□□□□□ -0.44
CD28-202ENST00000374481 HDAC5Q9UQL6 1122 aa12.27□□□□□ -0.44
CD28-202ENST00000374481 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.27□□□□□ -0.45
CD28-202ENST00000374481 RAB3GAP1Q15042 981 aa12.27□□□□□ -0.45
CD28-202ENST00000374481 NUP155O75694 1391 aa12.27□□□□□ -0.45
CD28-202ENST00000374481 CCDC27Q2M243 656 aa12.27□□□□□ -0.45
CD28-202ENST00000374481 CC2D2AQ9P2K1 1620 aa12.27□□□□□ -0.45
CD28-202ENST00000374481 SLFN5Q08AF3 891 aa12.26□□□□□ -0.45
CD28-202ENST00000374481 ZFP91Q96JP5 570 aaPredicted RBP12.26□□□□□ -0.45
CD28-202ENST00000374481 PAXBP1Q9Y5B6 917 aa12.26□□□□□ -0.45
CD28-202ENST00000374481 HSP90B1P14625 803 aaKnown RBP12.26□□□□□ -0.45
CD28-202ENST00000374481 UVSSAQ2YD98 709 aa12.26□□□□□ -0.45
CD28-202ENST00000374481 WWC1Q8IX03 1113 aa12.26□□□□□ -0.45
CD28-202ENST00000374481 RBSNQ9H1K0 784 aa12.26□□□□□ -0.45
CD28-202ENST00000374481 TDO2P48775 406 aa12.26□□□□□ -0.45
CD28-202ENST00000374481 GAS2L3Q86XJ1 694 aa12.26□□□□□ -0.45
CD28-202ENST00000374481 TMX1Q9H3N1 280 aa12.26□□□□□ -0.45
CD28-202ENST00000374481 GTF2E1P29083 439 aaPredicted RBP12.25□□□□□ -0.45
CD28-202ENST00000374481 FILIP1Q7Z7B0 1213 aa12.25□□□□□ -0.45
CD28-202ENST00000374481 BCL2L12Q9HB09 334 aa12.25□□□□□ -0.45
CD28-202ENST00000374481 WDR33Q9C0J8 1336 aaKnown RBP12.25□□□□□ -0.45
CD28-202ENST00000374481 EIF3JO75822 258 aaKnown RBP12.25□□□□□ -0.45
CD28-202ENST00000374481 ERCC4Q92889 916 aaPredicted RBP12.25□□□□□ -0.45
CD28-202ENST00000374481 KIF2AO00139 706 aaPredicted RBP12.25□□□□□ -0.45
CD28-202ENST00000374481 LMAN1P49257 510 aa12.25□□□□□ -0.45
CD28-202ENST00000374481 MNAT1P51948 309 aa12.25□□□□□ -0.45
CD28-202ENST00000374481 RSPH14Q9UHP6 348 aa12.25□□□□□ -0.45
CD28-202ENST00000374481 LRRC9Q6ZRR7 1453 aa12.24□□□□□ -0.45
CD28-202ENST00000374481 MAPKBP1O60336 1514 aa12.24□□□□□ -0.45
CD28-202ENST00000374481 SF3A1Q15459 793 aaKnown RBP12.24□□□□□ -0.45
CD28-202ENST00000374481 FGD6Q6ZV73 1430 aa12.24□□□□□ -0.45
CD28-202ENST00000374481 MAP3K1Q13233 1512 aa12.24□□□□□ -0.45
CD28-202ENST00000374481 SMC5Q8IY18 1101 aa12.24□□□□□ -0.45
CD28-202ENST00000374481 CCDC191Q8NCU4 936 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms