RNA–Protein interactions for RNA: ENST00000373899.3

TFAM-202, Transcript of transcription factor A, mitochondrial, humanhuman

TSL 2

Gene TFAM, Length 1,121 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAM-202ENST00000373899 SLC4A1APQ9BWU0 796 aaKnown RBP20.02■□□□□ 0.8
TFAM-202ENST00000373899 NUTM2BA6NNL0 878 aaPredicted RBP20.01■□□□□ 0.79
TFAM-202ENST00000373899 NUTM2EB1AL46 878 aaPredicted RBP20.01■□□□□ 0.79
TFAM-202ENST00000373899 NUTM2AQ8IVF1 878 aaPredicted RBP20.01■□□□□ 0.79
TFAM-202ENST00000373899 DDX17Q92841 729 aaKnown RBP20■□□□□ 0.79
TFAM-202ENST00000373899 MYCNP04198 464 aaPredicted RBP19.99■□□□□ 0.79
TFAM-202ENST00000373899 KIF1BO60333 1816 aa19.98■□□□□ 0.79
TFAM-202ENST00000373899 PRAG1Q86YV5 1406 aa19.98■□□□□ 0.79
TFAM-202ENST00000373899 C1orf167Q5SNV9 1468 aa19.98■□□□□ 0.79
TFAM-202ENST00000373899 PTCH1Q13635 1447 aa19.97■□□□□ 0.79
TFAM-202ENST00000373899 LRRC59Q96AG4 307 aaKnown RBP19.97■□□□□ 0.79
TFAM-202ENST00000373899 MPHOSPH9Q99550 1183 aa19.96■□□□□ 0.79
TFAM-202ENST00000373899 ZNF326Q5BKZ1 582 aaKnown RBP19.93■□□□□ 0.78
TFAM-202ENST00000373899 COL22A1Q8NFW1 1626 aaPredicted RBP19.93■□□□□ 0.78
TFAM-202ENST00000373899 ROBO2Q9HCK4 1378 aa19.93■□□□□ 0.78
TFAM-202ENST00000373899 C8orf37Q96NL8 207 aa19.92■□□□□ 0.78
TFAM-202ENST00000373899 ACIN1Q9UKV3 1341 aaKnown RBP19.92■□□□□ 0.78
TFAM-202ENST00000373899 RAB3GAP2Q9H2M9 1393 aa19.92■□□□□ 0.78
TFAM-202ENST00000373899 HRCP23327 699 aa19.91■□□□□ 0.78
TFAM-202ENST00000373899 RBM6P78332 1123 aaKnown RBP19.91■□□□□ 0.78
TFAM-202ENST00000373899 SOS2Q07890 1332 aaPredicted RBP19.91■□□□□ 0.78
TFAM-202ENST00000373899 PPLO60437 1756 aa19.9■□□□□ 0.78
TFAM-202ENST00000373899 QTRT2Q9H974 415 aaKnown RBP19.9■□□□□ 0.78
TFAM-202ENST00000373899 ORAI2Q96SN7 254 aa19.87■□□□□ 0.77
TFAM-202ENST00000373899 CDC42BPGQ6DT37 1551 aa19.86■□□□□ 0.77
TFAM-202ENST00000373899 MYOM2P54296 1465 aa19.86■□□□□ 0.77
TFAM-202ENST00000373899 MARF1Q9Y4F3 1742 aaKnown RBP19.85■□□□□ 0.77
TFAM-202ENST00000373899 VGFO15240 615 aaPredicted RBP19.85■□□□□ 0.77
TFAM-202ENST00000373899 ATRNO75882 1429 aa19.84■□□□□ 0.77
TFAM-202ENST00000373899 RPGRIP1LQ68CZ1 1315 aa19.83■□□□□ 0.77
TFAM-202ENST00000373899 ADAMTS2O95450 1211 aa19.83■□□□□ 0.77
TFAM-202ENST00000373899 PXDNQ92626 1479 aa19.83■□□□□ 0.76
TFAM-202ENST00000373899 FNBP4Q8N3X1 1017 aaPredicted RBP19.82■□□□□ 0.76
TFAM-202ENST00000373899 NGLY1Q96IV0 654 aa19.82■□□□□ 0.76
TFAM-202ENST00000373899 BCL9LQ86UU0 1499 aa19.79■□□□□ 0.76
TFAM-202ENST00000373899 FOXD4L1Q9NU39 408 aa19.79■□□□□ 0.76
TFAM-202ENST00000373899 ATAD2Q6PL18 1390 aa19.79■□□□□ 0.76
TFAM-202ENST00000373899 IFT172Q9UG01 1749 aa19.79■□□□□ 0.76
TFAM-202ENST00000373899 USP21Q9UK80 565 aa19.78■□□□□ 0.76
TFAM-202ENST00000373899 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.77■□□□□ 0.76
TFAM-202ENST00000373899 TRPC5Q9UL62 973 aaPredicted RBP19.77■□□□□ 0.76
TFAM-202ENST00000373899 EP400Q96L91 3159 aa19.77■□□□□ 0.76
TFAM-202ENST00000373899 TECPR2O15040 1411 aa19.76■□□□□ 0.75
TFAM-202ENST00000373899 KNDC1Q76NI1 1749 aa19.76■□□□□ 0.75
TFAM-202ENST00000373899 SRCAPQ6ZRS2 3230 aa19.76■□□□□ 0.75
TFAM-202ENST00000373899 CCDC144AA2RUR9 1427 aa19.74■□□□□ 0.75
TFAM-202ENST00000373899 SPATA31E1Q6ZUB1 1445 aa19.74■□□□□ 0.75
TFAM-202ENST00000373899 ANKRD30BQ9BXX2 1392 aa19.73■□□□□ 0.75
TFAM-202ENST00000373899 FMN2Q9NZ56 1722 aa19.73■□□□□ 0.75
TFAM-202ENST00000373899 GLI3P10071 1580 aa19.72■□□□□ 0.75
TFAM-202ENST00000373899 RGL3Q3MIN7 710 aa19.72■□□□□ 0.75
TFAM-202ENST00000373899 NPHP3Q7Z494 1330 aa19.72■□□□□ 0.75
TFAM-202ENST00000373899 ADGRF5Q8IZF2 1346 aa19.71■□□□□ 0.75
TFAM-202ENST00000373899 SLIT2O94813 1529 aa19.69■□□□□ 0.74
TFAM-202ENST00000373899 PLEKHH1Q9ULM0 1364 aa19.69■□□□□ 0.74
TFAM-202ENST00000373899 ESCO1Q5FWF5 840 aa19.68■□□□□ 0.74
TFAM-202ENST00000373899 KIF1AQ12756 1690 aa19.68■□□□□ 0.74
TFAM-202ENST00000373899 LRPPRCP42704 1394 aaKnown RBP19.68■□□□□ 0.74
TFAM-202ENST00000373899 BRWD3Q6RI45 1802 aa19.67■□□□□ 0.74
TFAM-202ENST00000373899 USP32Q8NFA0 1604 aa19.67■□□□□ 0.74
TFAM-202ENST00000373899 FOXO3O43524 673 aa19.67■□□□□ 0.74
TFAM-202ENST00000373899 XPCQ01831 940 aaPredicted RBP19.67■□□□□ 0.74
TFAM-202ENST00000373899 ABCC11Q96J66 1382 aa19.66■□□□□ 0.74
TFAM-202ENST00000373899 PIK3C2GO75747 1445 aa19.66■□□□□ 0.74
TFAM-202ENST00000373899 RGPD8O14715 1765 aaPredicted RBP19.65■□□□□ 0.74
TFAM-202ENST00000373899 POLA2Q14181 598 aa19.65■□□□□ 0.74
TFAM-202ENST00000373899 WAPLQ7Z5K2 1190 aa19.65■□□□□ 0.74
TFAM-202ENST00000373899 GJD4Q96KN9 370 aaPredicted RBP19.65■□□□□ 0.74
TFAM-202ENST00000373899 RALGAPBQ86X10 1494 aa19.65■□□□□ 0.74
TFAM-202ENST00000373899 ABCA3Q99758 1704 aa19.65■□□□□ 0.74
TFAM-202ENST00000373899 PLCH1Q4KWH8 1693 aa19.62■□□□□ 0.73
TFAM-202ENST00000373899 SPATA31A3Q5VYP0 1347 aa19.62■□□□□ 0.73
TFAM-202ENST00000373899 TRIM26Q12899 539 aaPredicted RBP19.62■□□□□ 0.73
TFAM-202ENST00000373899 CCDC125Q86Z20 511 aa19.62■□□□□ 0.73
TFAM-202ENST00000373899 ATF5Q9Y2D1 282 aaPredicted RBP19.62■□□□□ 0.73
TFAM-202ENST00000373899 NUTM2FA1L443 756 aa19.61■□□□□ 0.73
TFAM-202ENST00000373899 YTHDC2Q9H6S0 1430 aaKnown RBP19.6■□□□□ 0.73
TFAM-202ENST00000373899 ZBTB22O15209 634 aa19.6■□□□□ 0.73
TFAM-202ENST00000373899 NWD2Q9ULI1 1742 aa19.59■□□□□ 0.73
TFAM-202ENST00000373899 TMEM132EQ6IEE7 984 aa19.59■□□□□ 0.73
TFAM-202ENST00000373899 UNC5CLQ8IV45 518 aa19.59■□□□□ 0.73
TFAM-202ENST00000373899 SIRT1Q96EB6 747 aa19.59■□□□□ 0.73
TFAM-202ENST00000373899 STK26Q9P289 416 aa19.59■□□□□ 0.73
TFAM-202ENST00000373899 ZRANB1Q9UGI0 708 aa19.59■□□□□ 0.73
TFAM-202ENST00000373899 NRXN1Q9ULB1 1477 aa19.59■□□□□ 0.73
TFAM-202ENST00000373899 BLMP54132 1417 aaPredicted RBP19.58■□□□□ 0.72
TFAM-202ENST00000373899 TNS3Q68CZ2 1445 aa19.57■□□□□ 0.72
TFAM-202ENST00000373899 NRAPQ86VF7 1730 aa19.55■□□□□ 0.72
TFAM-202ENST00000373899 C14orf93Q9H972 538 aaKnown RBP19.55■□□□□ 0.72
TFAM-202ENST00000373899 POTEHQ6S545 545 aa19.53■□□□□ 0.72
TFAM-202ENST00000373899 KRT28Q7Z3Y7 464 aa19.53■□□□□ 0.72
TFAM-202ENST00000373899 DHX57Q6P158 1386 aaKnown RBP19.53■□□□□ 0.72
TFAM-202ENST00000373899 TRPM3Q9HCF6 1732 aaPredicted RBP19.53■□□□□ 0.72
TFAM-202ENST00000373899 LRP5O75197 1615 aa19.51■□□□□ 0.71
TFAM-202ENST00000373899 ONECUT3O60422 494 aaPredicted RBP19.51■□□□□ 0.71
TFAM-202ENST00000373899 CFAP70Q5T0N1 1121 aa19.51■□□□□ 0.71
TFAM-202ENST00000373899 DCAF11Q8TEB1 546 aa19.51■□□□□ 0.71
TFAM-202ENST00000373899 SBNO1A3KN83 1393 aa19.51■□□□□ 0.71
TFAM-202ENST00000373899 ADGRB2O60241 1585 aa19.51■□□□□ 0.71
TFAM-202ENST00000373899 VPS72Q15906 364 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms