RNA–Protein interactions for RNA: ENST00000373433.8

RPRD1B-201, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1B, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-201ENST00000373433 KIDINS220Q9ULH0 1771 aa14.34□□□□□ -0.11
RPRD1B-201ENST00000373433 IQGAP3Q86VI3 1631 aa14.34□□□□□ -0.11
RPRD1B-201ENST00000373433 VSIG10Q8N0Z9 540 aa14.34□□□□□ -0.11
RPRD1B-201ENST00000373433 UNC13BO14795 1591 aa14.33□□□□□ -0.11
RPRD1B-201ENST00000373433 C8orf34Q49A92 452 aa14.33□□□□□ -0.12
RPRD1B-201ENST00000373433 CENPQQ7L2Z9 268 aaPredicted RBP14.33□□□□□ -0.12
RPRD1B-201ENST00000373433 U2SURPO15042 1029 aaKnown RBP14.33□□□□□ -0.12
RPRD1B-201ENST00000373433 RRAGDQ9NQL2 400 aaPredicted RBP14.33□□□□□ -0.12
RPRD1B-201ENST00000373433 SCAF11Q99590 1463 aaKnown RBP14.33□□□□□ -0.12
RPRD1B-201ENST00000373433 UHRF1BP1Q6BDS2 1440 aa14.32□□□□□ -0.12
RPRD1B-201ENST00000373433 PRDM15P57071 1507 aaPredicted RBP14.32□□□□□ -0.12
RPRD1B-201ENST00000373433 COL17A1Q9UMD9 1497 aaPredicted RBP14.31□□□□□ -0.12
RPRD1B-201ENST00000373433 PTPRTO14522 1441 aa14.31□□□□□ -0.12
RPRD1B-201ENST00000373433 ABCC3O15438 1527 aa14.31□□□□□ -0.12
RPRD1B-201ENST00000373433 CGNL1Q0VF96 1302 aa14.31□□□□□ -0.12
RPRD1B-201ENST00000373433 RIMS2Q9UQ26 1411 aa14.31□□□□□ -0.12
RPRD1B-201ENST00000373433 CDK19Q9BWU1 502 aa14.31□□□□□ -0.12
RPRD1B-201ENST00000373433 KDM5CP41229 1560 aa14.3□□□□□ -0.12
RPRD1B-201ENST00000373433 DIP2CQ9Y2E4 1556 aa14.3□□□□□ -0.12
RPRD1B-201ENST00000373433 TRPM2O94759 1503 aa14.3□□□□□ -0.12
RPRD1B-201ENST00000373433 TET3O43151 1660 aa14.29□□□□□ -0.12
RPRD1B-201ENST00000373433 EFCAB6Q5THR3 1501 aa14.29□□□□□ -0.12
RPRD1B-201ENST00000373433 DISP3Q9P2K9 1392 aa14.29□□□□□ -0.12
RPRD1B-201ENST00000373433 ABCA6Q8N139 1617 aa14.28□□□□□ -0.12
RPRD1B-201ENST00000373433 KDM2BQ8NHM5 1336 aa14.28□□□□□ -0.12
RPRD1B-201ENST00000373433 TESK2Q96S53 571 aa14.28□□□□□ -0.12
RPRD1B-201ENST00000373433 MAP3K4Q9Y6R4 1608 aa14.27□□□□□ -0.12
RPRD1B-201ENST00000373433 L1TD1Q5T7N2 865 aaKnown RBP14.27□□□□□ -0.12
RPRD1B-201ENST00000373433 CABP1Q9NZU7 370 aa14.27□□□□□ -0.12
RPRD1B-201ENST00000373433 PNNQ9H307 717 aaKnown RBP14.27□□□□□ -0.13
RPRD1B-201ENST00000373433 AMOTL2Q9Y2J4 779 aa14.26□□□□□ -0.13
RPRD1B-201ENST00000373433 GGNBP2Q9H3C7 697 aa14.26□□□□□ -0.13
RPRD1B-201ENST00000373433 HAP1P54257 671 aaPredicted RBP14.26□□□□□ -0.13
RPRD1B-201ENST00000373433 GZF1Q9H116 711 aaPredicted RBP14.25□□□□□ -0.13
RPRD1B-201ENST00000373433 EIF2AK4Q9P2K8 1649 aaKnown RBP14.25□□□□□ -0.13
RPRD1B-201ENST00000373433 U2AF1L5P0DN76 240 aaPredicted RBP14.25□□□□□ -0.13
RPRD1B-201ENST00000373433 U2AF1Q01081 240 aaKnown RBP eCLIP14.25□□□□□ -0.13
RPRD1B-201ENST00000373433 BECN1Q14457 450 aa14.25□□□□□ -0.13
RPRD1B-201ENST00000373433 RBM33Q96EV2 1170 aaKnown RBP14.25□□□□□ -0.13
RPRD1B-201ENST00000373433 HSP90AA2PQ14568 343 aaPredicted RBP14.24□□□□□ -0.13
RPRD1B-201ENST00000373433 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.24□□□□□ -0.13
RPRD1B-201ENST00000373433 ZMYND15Q9H091 742 aa14.24□□□□□ -0.13
RPRD1B-201ENST00000373433 PROSER2Q86WR7 435 aaPredicted RBP14.24□□□□□ -0.13
RPRD1B-201ENST00000373433 MAPK8IP3Q9UPT6 1336 aa14.23□□□□□ -0.13
RPRD1B-201ENST00000373433 ARHGAP31Q2M1Z3 1444 aa14.23□□□□□ -0.13
RPRD1B-201ENST00000373433 PMFBP1Q8TBY8 1022 aa14.23□□□□□ -0.13
RPRD1B-201ENST00000373433 E9PCH4 1651 aa14.23□□□□□ -0.13
RPRD1B-201ENST00000373433 HSP90AA1P07900 732 aaKnown RBP14.23□□□□□ -0.13
RPRD1B-201ENST00000373433 ERVK-7P63135 1459 aa14.23□□□□□ -0.13
RPRD1B-201ENST00000373433 CEP152O94986 1710 aa14.22□□□□□ -0.13
RPRD1B-201ENST00000373433 SPRYD3Q8NCJ5 442 aa14.22□□□□□ -0.13
RPRD1B-201ENST00000373433 COG3Q96JB2 828 aa14.21□□□□□ -0.13
RPRD1B-201ENST00000373433 GPRASP1Q5JY77 1395 aa14.21□□□□□ -0.13
RPRD1B-201ENST00000373433 LTKP29376 864 aa14.2□□□□□ -0.14
RPRD1B-201ENST00000373433 CCDC146Q8IYE0 955 aa14.2□□□□□ -0.14
RPRD1B-201ENST00000373433 CLTCL1P53675 1640 aa14.2□□□□□ -0.14
RPRD1B-201ENST00000373433 ATAD2Q6PL18 1390 aa14.2□□□□□ -0.14
RPRD1B-201ENST00000373433 PARD3Q8TEW0 1356 aa14.2□□□□□ -0.14
RPRD1B-201ENST00000373433 CCDC61Q9Y6R9 512 aa14.2□□□□□ -0.14
RPRD1B-201ENST00000373433 RNF17Q9BXT8 1623 aaKnown RBP14.2□□□□□ -0.14
RPRD1B-201ENST00000373433 GOLGA6L3A6NEY3 463 aa14.2□□□□□ -0.14
RPRD1B-201ENST00000373433 NUDT16Q96DE0 195 aaKnown RBP14.2□□□□□ -0.14
RPRD1B-201ENST00000373433 ADAMTS8Q9UP79 889 aa14.2□□□□□ -0.14
RPRD1B-201ENST00000373433 TMEM2Q9UHN6 1383 aa14.19□□□□□ -0.14
RPRD1B-201ENST00000373433 SPHKAPQ2M3C7 1700 aa14.19□□□□□ -0.14
RPRD1B-201ENST00000373433 KIF1BO60333 1816 aa14.19□□□□□ -0.14
RPRD1B-201ENST00000373433 HSPA2P54652 639 aa14.18□□□□□ -0.14
RPRD1B-201ENST00000373433 PANK2Q9BZ23 570 aa14.18□□□□□ -0.14
RPRD1B-201ENST00000373433 PPRC1Q5VV67 1664 aaKnown RBP14.18□□□□□ -0.14
RPRD1B-201ENST00000373433 WASLO00401 505 aaPredicted RBP14.18□□□□□ -0.14
RPRD1B-201ENST00000373433 SEC24BO95487 1268 aa14.18□□□□□ -0.14
RPRD1B-201ENST00000373433 ATF3P18847 181 aa14.18□□□□□ -0.14
RPRD1B-201ENST00000373433 PSME1Q06323 249 aa14.18□□□□□ -0.14
RPRD1B-201ENST00000373433 FRMPD1Q5SYB0 1578 aa14.18□□□□□ -0.14
RPRD1B-201ENST00000373433 LMTK2Q8IWU2 1503 aa14.18□□□□□ -0.14
RPRD1B-201ENST00000373433 PPP2R1AP30153 589 aa14.17□□□□□ -0.14
RPRD1B-201ENST00000373433 ESCO1Q5FWF5 840 aa14.17□□□□□ -0.14
RPRD1B-201ENST00000373433 YTHDC2Q9H6S0 1430 aaKnown RBP14.17□□□□□ -0.14
RPRD1B-201ENST00000373433 XRCC6P12956 609 aaKnown RBP eCLIP14.16□□□□□ -0.14
RPRD1B-201ENST00000373433 MTHFSP49914 203 aa14.16□□□□□ -0.14
RPRD1B-201ENST00000373433 GOLGA2Q08379 1002 aa14.16□□□□□ -0.14
RPRD1B-201ENST00000373433 DUSP27Q5VZP5 1158 aa14.16□□□□□ -0.14
RPRD1B-201ENST00000373433 NUTM2GQ5VZR2 741 aa14.16□□□□□ -0.14
RPRD1B-201ENST00000373433 NSD3Q9BZ95 1437 aa14.16□□□□□ -0.14
RPRD1B-201ENST00000373433 RICTORQ6R327 1708 aa14.16□□□□□ -0.14
RPRD1B-201ENST00000373433 ZMYM4Q5VZL5 1548 aa14.16□□□□□ -0.14
RPRD1B-201ENST00000373433 UPF2Q9HAU5 1272 aaKnown RBP14.16□□□□□ -0.14
RPRD1B-201ENST00000373433 AMPHP49418 695 aa14.15□□□□□ -0.14
RPRD1B-201ENST00000373433 AGLP35573 1532 aa14.15□□□□□ -0.14
RPRD1B-201ENST00000373433 ARHGEF40Q8TER5 1519 aa14.15□□□□□ -0.14
RPRD1B-201ENST00000373433 PER1O15534 1290 aaPredicted RBP14.14□□□□□ -0.15
RPRD1B-201ENST00000373433 TBX22Q9Y458 520 aa14.14□□□□□ -0.15
RPRD1B-201ENST00000373433 NCKAP5LQ9HCH0 1330 aa14.13□□□□□ -0.15
RPRD1B-201ENST00000373433 CAMSAP1Q5T5Y3 1602 aa14.13□□□□□ -0.15
RPRD1B-201ENST00000373433 BLMP54132 1417 aaPredicted RBP14.13□□□□□ -0.15
RPRD1B-201ENST00000373433 USP19O94966 1318 aa14.13□□□□□ -0.15
RPRD1B-201ENST00000373433 MYOM2P54296 1465 aa14.13□□□□□ -0.15
RPRD1B-201ENST00000373433 RRP9O43818 475 aaKnown RBP14.13□□□□□ -0.15
RPRD1B-201ENST00000373433 ZNF692Q9BU19 519 aaPredicted RBP14.13□□□□□ -0.15
RPRD1B-201ENST00000373433 BCAR3O75815 825 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms