RNA–Protein interactions for RNA: ENST00000373386.6

GARNL3-201, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 3,143 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-201ENST00000373386 MCCP23508 829 aa10.63□□□□□ -0.71
GARNL3-201ENST00000373386 KDM2AQ9Y2K7 1162 aa10.63□□□□□ -0.71
GARNL3-201ENST00000373386 NRXN1Q9ULB1 1477 aa10.63□□□□□ -0.71
GARNL3-201ENST00000373386 CDCA8Q53HL2 280 aa10.63□□□□□ -0.71
GARNL3-201ENST00000373386 MYOM1P52179 1685 aa10.63□□□□□ -0.71
GARNL3-201ENST00000373386 DISP3Q9P2K9 1392 aa10.63□□□□□ -0.71
GARNL3-201ENST00000373386 EFCAB6Q5THR3 1501 aa10.63□□□□□ -0.71
GARNL3-201ENST00000373386 MAP3K4Q9Y6R4 1608 aa10.62□□□□□ -0.71
GARNL3-201ENST00000373386 SPAG9O60271 1321 aaKnown RBP10.62□□□□□ -0.71
GARNL3-201ENST00000373386 KANK1Q14678 1352 aa10.62□□□□□ -0.71
GARNL3-201ENST00000373386 FANCAO15360 1455 aa10.62□□□□□ -0.71
GARNL3-201ENST00000373386 RIMBP3CA6NJZ7 1639 aa10.62□□□□□ -0.71
GARNL3-201ENST00000373386 RIMBP3BA6NNM3 1639 aa10.62□□□□□ -0.71
GARNL3-201ENST00000373386 RIMBP3Q9UFD9 1639 aa10.62□□□□□ -0.71
GARNL3-201ENST00000373386 SETBP1Q9Y6X0 1596 aa10.62□□□□□ -0.71
GARNL3-201ENST00000373386 KIF1BO60333 1816 aa10.62□□□□□ -0.71
GARNL3-201ENST00000373386 EIF3AQ14152 1382 aaKnown RBP10.62□□□□□ -0.71
GARNL3-201ENST00000373386 KDM5AP29375 1690 aaKnown RBP10.62□□□□□ -0.71
GARNL3-201ENST00000373386 PATL2C9JE40 543 aaKnown RBP10.61□□□□□ -0.71
GARNL3-201ENST00000373386 IPO9Q96P70 1041 aaKnown RBP10.61□□□□□ -0.71
GARNL3-201ENST00000373386 IRX3P78415 501 aaPredicted RBP10.6□□□□□ -0.71
GARNL3-201ENST00000373386 NBPF1Q3BBV0 1214 aa10.6□□□□□ -0.71
GARNL3-201ENST00000373386 ANP32BQ92688 251 aaKnown RBP10.6□□□□□ -0.71
GARNL3-201ENST00000373386 PIK3C2GO75747 1445 aa10.6□□□□□ -0.71
GARNL3-201ENST00000373386 PDCL3Q9H2J4 239 aa10.6□□□□□ -0.71
GARNL3-201ENST00000373386 KIDINS220Q9ULH0 1771 aa10.59□□□□□ -0.71
GARNL3-201ENST00000373386 SBNO2Q9Y2G9 1366 aa10.59□□□□□ -0.71
GARNL3-201ENST00000373386 ASXL1Q8IXJ9 1541 aa10.59□□□□□ -0.71
GARNL3-201ENST00000373386 ADGRL1O94910 1474 aa10.58□□□□□ -0.72
GARNL3-201ENST00000373386 PAK3O75914 559 aaPredicted RBP10.58□□□□□ -0.72
GARNL3-201ENST00000373386 FAM43BQ6ZT52 329 aaPredicted RBP10.58□□□□□ -0.72
GARNL3-201ENST00000373386 ZNF622Q969S3 477 aaKnown RBP eCLIP10.58□□□□□ -0.72
GARNL3-201ENST00000373386 TMEM51Q9NW97 253 aa10.58□□□□□ -0.72
GARNL3-201ENST00000373386 ABCA6Q8N139 1617 aa10.58□□□□□ -0.72
GARNL3-201ENST00000373386 ZNF518AQ6AHZ1 1483 aa10.58□□□□□ -0.72
GARNL3-201ENST00000373386 ZBTB47Q9UFB7 747 aaPredicted RBP10.58□□□□□ -0.72
GARNL3-201ENST00000373386 ADGRB3O60242 1522 aa10.57□□□□□ -0.72
GARNL3-201ENST00000373386 PPRC1Q5VV67 1664 aaKnown RBP10.57□□□□□ -0.72
GARNL3-201ENST00000373386 RRP1P56182 461 aaKnown RBP10.56□□□□□ -0.72
GARNL3-201ENST00000373386 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.56□□□□□ -0.72
GARNL3-201ENST00000373386 MLH3Q9UHC1 1453 aa10.56□□□□□ -0.72
GARNL3-201ENST00000373386 CYB5RLQ6IPT4 315 aa10.56□□□□□ -0.72
GARNL3-201ENST00000373386 ZC3H13Q5T200 1668 aaKnown RBP10.56□□□□□ -0.72
GARNL3-201ENST00000373386 USP32Q8NFA0 1604 aa10.55□□□□□ -0.72
GARNL3-201ENST00000373386 RGL3Q3MIN7 710 aa10.55□□□□□ -0.72
GARNL3-201ENST00000373386 PANK3Q9H999 370 aa10.55□□□□□ -0.72
GARNL3-201ENST00000373386 TCERG1O14776 1098 aaKnown RBP10.55□□□□□ -0.72
GARNL3-201ENST00000373386 MMP14P50281 582 aa10.55□□□□□ -0.72
GARNL3-201ENST00000373386 AXDND1Q5T1B0 1012 aaPredicted RBP10.55□□□□□ -0.72
GARNL3-201ENST00000373386 NGEFQ8N5V2 710 aa10.54□□□□□ -0.72
GARNL3-201ENST00000373386 HDAC5Q9UQL6 1122 aa10.54□□□□□ -0.72
GARNL3-201ENST00000373386 PPLO60437 1756 aa10.54□□□□□ -0.72
GARNL3-201ENST00000373386 ASXL2Q76L83 1435 aa10.54□□□□□ -0.72
GARNL3-201ENST00000373386 NPM1P06748 294 aaKnown RBP eCLIP10.54□□□□□ -0.72
GARNL3-201ENST00000373386 MROH2AA6NES4 1674 aa10.54□□□□□ -0.72
GARNL3-201ENST00000373386 RCAN3Q9UKA8 241 aa10.53□□□□□ -0.72
GARNL3-201ENST00000373386 HECW2Q9P2P5 1572 aa10.53□□□□□ -0.72
GARNL3-201ENST00000373386 SETQ01105 290 aaPredicted RBP10.53□□□□□ -0.72
GARNL3-201ENST00000373386 PHF14O94880 888 aa10.53□□□□□ -0.72
GARNL3-201ENST00000373386 SMAP1Q8IYB5 467 aaPredicted RBP10.52□□□□□ -0.72
GARNL3-201ENST00000373386 APPP05067 770 aa10.52□□□□□ -0.73
GARNL3-201ENST00000373386 MS4A1P11836 297 aa10.51□□□□□ -0.73
GARNL3-201ENST00000373386 CERS3Q8IU89 383 aa10.51□□□□□ -0.73
GARNL3-201ENST00000373386 POGZQ7Z3K3 1410 aa10.51□□□□□ -0.73
GARNL3-201ENST00000373386 ERVK-7P63135 1459 aa10.51□□□□□ -0.73
GARNL3-201ENST00000373386 PIK3C2BO00750 1634 aa10.51□□□□□ -0.73
GARNL3-201ENST00000373386 GSE1Q14687 1217 aa10.51□□□□□ -0.73
GARNL3-201ENST00000373386 AFAP1Q8N556 730 aa10.51□□□□□ -0.73
GARNL3-201ENST00000373386 FRMPD1Q5SYB0 1578 aa10.51□□□□□ -0.73
GARNL3-201ENST00000373386 VGLL3A8MV65 326 aa10.51□□□□□ -0.73
GARNL3-201ENST00000373386 ZNF521Q96K83 1311 aa10.5□□□□□ -0.73
GARNL3-201ENST00000373386 EXOC6Q8TAG9 804 aa10.5□□□□□ -0.73
GARNL3-201ENST00000373386 KNSTRNQ9Y448 316 aa10.5□□□□□ -0.73
GARNL3-201ENST00000373386 NEO1Q92859 1461 aa10.5□□□□□ -0.73
GARNL3-201ENST00000373386 RPGRIP1LQ68CZ1 1315 aa10.49□□□□□ -0.73
GARNL3-201ENST00000373386 PRDM16Q9HAZ2 1276 aa10.49□□□□□ -0.73
GARNL3-201ENST00000373386 PPP2R1AP30153 589 aa10.49□□□□□ -0.73
GARNL3-201ENST00000373386 PNNQ9H307 717 aaKnown RBP10.49□□□□□ -0.73
GARNL3-201ENST00000373386 ADGRB1O14514 1584 aa10.48□□□□□ -0.73
GARNL3-201ENST00000373386 CAMSAP1Q5T5Y3 1602 aa10.48□□□□□ -0.73
GARNL3-201ENST00000373386 SENP3-EIF4A1A0A087X0R7 540 aa10.48□□□□□ -0.73
GARNL3-201ENST00000373386 PDE4AP27815 886 aa10.47□□□□□ -0.73
GARNL3-201ENST00000373386 OS9Q13438 667 aaPredicted RBP10.47□□□□□ -0.73
GARNL3-201ENST00000373386 ARHGAP31Q2M1Z3 1444 aa10.47□□□□□ -0.73
GARNL3-201ENST00000373386 UTP14CQ5TAP6 766 aaKnown RBP10.47□□□□□ -0.73
GARNL3-201ENST00000373386 ZNF526Q8TF50 670 aaPredicted RBP10.47□□□□□ -0.73
GARNL3-201ENST00000373386 ABCC3O15438 1527 aa10.47□□□□□ -0.73
GARNL3-201ENST00000373386 QRICH2Q9H0J4 1663 aa10.47□□□□□ -0.73
GARNL3-201ENST00000373386 BACH2Q9BYV9 841 aa10.47□□□□□ -0.73
GARNL3-201ENST00000373386 CC2D1BQ5T0F9 858 aaKnown RBP10.46□□□□□ -0.73
GARNL3-201ENST00000373386 TRMT2AQ8IZ69 625 aaKnown RBP10.46□□□□□ -0.74
GARNL3-201ENST00000373386 NOS1P29475 1434 aa10.46□□□□□ -0.74
GARNL3-201ENST00000373386 POLR3AO14802 1390 aaPredicted RBP10.45□□□□□ -0.74
GARNL3-201ENST00000373386 KIF3BO15066 747 aa10.45□□□□□ -0.74
GARNL3-201ENST00000373386 DDRGK1Q96HY6 314 aa10.45□□□□□ -0.74
GARNL3-201ENST00000373386 ZFYVE9O95405 1425 aa10.45□□□□□ -0.74
GARNL3-201ENST00000373386 UGGT1Q9NYU2 1555 aa10.45□□□□□ -0.74
GARNL3-201ENST00000373386 DNAJC2Q99543 621 aaKnown RBP10.45□□□□□ -0.74
GARNL3-201ENST00000373386 MYCNP04198 464 aaPredicted RBP10.44□□□□□ -0.74
GARNL3-201ENST00000373386 SLC52A1Q9NWF4 448 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms