RNA–Protein interactions for RNA: ENST00000373157.8

COL6A5-203, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 2

Gene COL6A5, Length 1,770 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-203ENST00000373157 CYP4X1Q8N118 509 aa5.69□□□□□ -1.5
COL6A5-203ENST00000373157 ATP13A2Q9NQ11 1180 aa5.69□□□□□ -1.5
COL6A5-203ENST00000373157 PODXL2Q9NZ53 605 aa5.69□□□□□ -1.5
COL6A5-203ENST00000373157 FAM198AQ9UFP1 575 aa5.69□□□□□ -1.5
COL6A5-203ENST00000373157 PPEF1O14829 653 aaPredicted RBP5.68□□□□□ -1.5
COL6A5-203ENST00000373157 S1PR4O95977 384 aa5.68□□□□□ -1.5
COL6A5-203ENST00000373157 KCTD17Q8N5Z5 321 aa5.68□□□□□ -1.5
COL6A5-203ENST00000373157 IRF7Q92985 503 aa5.68□□□□□ -1.5
COL6A5-203ENST00000373157 RPIAP49247 311 aa5.67□□□□□ -1.5
COL6A5-203ENST00000373157 CDHR5Q9HBB8 845 aa5.67□□□□□ -1.5
COL6A5-203ENST00000373157 PLEKHG3A1L390 1219 aa5.67□□□□□ -1.5
COL6A5-203ENST00000373157 MAP3K7O43318 606 aa5.67□□□□□ -1.5
COL6A5-203ENST00000373157 BLOC1S3Q6QNY0 202 aa5.67□□□□□ -1.5
COL6A5-203ENST00000373157 TTLL12Q14166 644 aaPredicted RBP5.66□□□□□ -1.5
COL6A5-203ENST00000373157 DDRGK1Q96HY6 314 aa5.66□□□□□ -1.5
COL6A5-203ENST00000373157 RBM27Q9P2N5 1060 aaKnown RBP5.66□□□□□ -1.5
COL6A5-203ENST00000373157 SUPT5HO00267 1087 aaKnown RBP5.65□□□□□ -1.5
COL6A5-203ENST00000373157 ADH1BP00325 375 aa5.65□□□□□ -1.5
COL6A5-203ENST00000373157 NPDC1Q9NQX5 325 aaPredicted RBP5.65□□□□□ -1.5
COL6A5-203ENST00000373157 NXF1Q9UBU9 619 aaKnown RBP5.65□□□□□ -1.5
COL6A5-203ENST00000373157 C3orf80F5H4A9 247 aa5.65□□□□□ -1.51
COL6A5-203ENST00000373157 TSR1Q2NL82 804 aaKnown RBP5.65□□□□□ -1.51
COL6A5-203ENST00000373157 SWT1Q5T5J6 900 aaKnown RBP5.65□□□□□ -1.51
COL6A5-203ENST00000373157 KRTAP4-8Q9BYQ9 185 aa5.65□□□□□ -1.51
COL6A5-203ENST00000373157 NUDT18Q6ZVK8 323 aa5.64□□□□□ -1.51
COL6A5-203ENST00000373157 TMEM151AQ8N4L1 468 aa5.64□□□□□ -1.51
COL6A5-203ENST00000373157 TLL1O43897 1013 aa5.63□□□□□ -1.51
COL6A5-203ENST00000373157 CD2BP2O95400 341 aaKnown RBP5.63□□□□□ -1.51
COL6A5-203ENST00000373157 PLA2G2CQ5R387 149 aa5.63□□□□□ -1.51
COL6A5-203ENST00000373157 XP32Q5T750 250 aa5.63□□□□□ -1.51
COL6A5-203ENST00000373157 GIGYF2Q6Y7W6 1299 aaKnown RBP5.63□□□□□ -1.51
COL6A5-203ENST00000373157 MS4A1P11836 297 aa5.62□□□□□ -1.51
COL6A5-203ENST00000373157 REPIN1Q9BWE0 567 aaKnown RBP5.62□□□□□ -1.51
COL6A5-203ENST00000373157 SLC6A16Q9GZN6 736 aa5.62□□□□□ -1.51
COL6A5-203ENST00000373157 GSK3AP49840 483 aa5.62□□□□□ -1.51
COL6A5-203ENST00000373157 MDM2Q00987 491 aaPredicted RBP5.6□□□□□ -1.51
COL6A5-203ENST00000373157 PHOX2BQ99453 314 aa5.6□□□□□ -1.51
COL6A5-203ENST00000373157 TTC24A2A3L6 582 aaPredicted RBP5.6□□□□□ -1.51
COL6A5-203ENST00000373157 NPM2Q86SE8 214 aaKnown RBP5.6□□□□□ -1.51
COL6A5-203ENST00000373157 ZMYND15Q9H091 742 aa5.6□□□□□ -1.51
COL6A5-203ENST00000373157 H3BM21 787 aa5.59□□□□□ -1.51
COL6A5-203ENST00000373157 ACTN4O43707 911 aaKnown RBP5.59□□□□□ -1.51
COL6A5-203ENST00000373157 NR1I2O75469 434 aa5.59□□□□□ -1.51
COL6A5-203ENST00000373157 IGHA1P01876 353 aa5.59□□□□□ -1.51
COL6A5-203ENST00000373157 CLCN1P35523 988 aa5.59□□□□□ -1.51
COL6A5-203ENST00000373157 FAM161AQ3B820 660 aa5.59□□□□□ -1.51
COL6A5-203ENST00000373157 KMT5BQ4FZB7 885 aa5.59□□□□□ -1.51
COL6A5-203ENST00000373157 GOPCQ9HD26 462 aa5.58□□□□□ -1.52
COL6A5-203ENST00000373157 GPCPD1Q9NPB8 672 aa5.58□□□□□ -1.52
COL6A5-203ENST00000373157 GDF11O95390 407 aa5.57□□□□□ -1.52
COL6A5-203ENST00000373157 PADI6Q6TGC4 694 aa5.57□□□□□ -1.52
COL6A5-203ENST00000373157 TTC13Q8NBP0 860 aa5.57□□□□□ -1.52
COL6A5-203ENST00000373157 EIF5BO60841 1220 aaKnown RBP5.57□□□□□ -1.52
COL6A5-203ENST00000373157 SMPD1P17405 629 aa5.57□□□□□ -1.52
COL6A5-203ENST00000373157 SSTR3P32745 418 aaPredicted RBP5.57□□□□□ -1.52
COL6A5-203ENST00000373157 METTL3Q86U44 580 aaKnown RBP5.57□□□□□ -1.52
COL6A5-203ENST00000373157 SNIP1Q8TAD8 396 aaKnown RBP5.57□□□□□ -1.52
COL6A5-203ENST00000373157 NLRP7Q8WX94 980 aa5.57□□□□□ -1.52
COL6A5-203ENST00000373157 PCMTD1Q96MG8 357 aaPredicted RBP5.57□□□□□ -1.52
COL6A5-203ENST00000373157 RNF225M0QZC1 329 aaPredicted RBP5.56□□□□□ -1.52
COL6A5-203ENST00000373157 OATP04181 439 aa5.56□□□□□ -1.52
COL6A5-203ENST00000373157 RASSF7Q02833 373 aa5.56□□□□□ -1.52
COL6A5-203ENST00000373157 ADGRG1Q9Y653 693 aa5.56□□□□□ -1.52
COL6A5-203ENST00000373157 SH3D19Q5HYK7 790 aa5.55□□□□□ -1.52
COL6A5-203ENST00000373157 RSPH6AQ9H0K4 717 aa5.55□□□□□ -1.52
COL6A5-203ENST00000373157 PXYLP1Q8TE99 480 aa5.55□□□□□ -1.52
COL6A5-203ENST00000373157 BEGAINQ9BUH8 593 aa5.55□□□□□ -1.52
COL6A5-203ENST00000373157 FAM217BQ9NTX9 383 aaPredicted RBP5.55□□□□□ -1.52
COL6A5-203ENST00000373157 FLIIQ13045 1269 aa5.54□□□□□ -1.52
COL6A5-203ENST00000373157 WNT7AO00755 349 aa5.53□□□□□ -1.52
COL6A5-203ENST00000373157 KRTAP9-2Q9BYQ4 174 aa5.53□□□□□ -1.52
COL6A5-203ENST00000373157 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.52□□□□□ -1.53
COL6A5-203ENST00000373157 EYA1Q99502 592 aa5.52□□□□□ -1.53
COL6A5-203ENST00000373157 ERBB4Q15303 1308 aa5.52□□□□□ -1.53
COL6A5-203ENST00000373157 SKIV2LQ15477 1246 aaKnown RBP5.52□□□□□ -1.53
COL6A5-203ENST00000373157 PSMG3-AS1Q96PY0 264 aa5.52□□□□□ -1.53
COL6A5-203ENST00000373157 FOXK2Q01167 660 aa5.51□□□□□ -1.53
COL6A5-203ENST00000373157 PROCA1Q8NCQ7 364 aaPredicted RBP5.51□□□□□ -1.53
COL6A5-203ENST00000373157 RBM46Q8TBY0 533 aaKnown RBP5.51□□□□□ -1.53
COL6A5-203ENST00000373157 POLR3EQ9NVU0 708 aa5.51□□□□□ -1.53
COL6A5-203ENST00000373157 ATP1B4Q9UN42 357 aaPredicted RBP5.51□□□□□ -1.53
COL6A5-203ENST00000373157 VSIG8P0DPA2 414 aa5.5□□□□□ -1.53
COL6A5-203ENST00000373157 KRTAP9-6A0A140TA67 174 aa5.5□□□□□ -1.53
COL6A5-203ENST00000373157 SPSB2Q99619 263 aa5.5□□□□□ -1.53
COL6A5-203ENST00000373157 DNMT3AQ9Y6K1 912 aaPredicted RBP5.5□□□□□ -1.53
COL6A5-203ENST00000373157 MYSM1Q5VVJ2 828 aa5.49□□□□□ -1.53
COL6A5-203ENST00000373157 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.48□□□□□ -1.53
COL6A5-203ENST00000373157 RCCD1A6NED2 376 aa5.48□□□□□ -1.53
COL6A5-203ENST00000373157 SCUBE3Q8IX30 993 aa5.48□□□□□ -1.53
COL6A5-203ENST00000373157 CLUAP1Q96AJ1 413 aa5.48□□□□□ -1.53
COL6A5-203ENST00000373157 TBC1D2Q9BYX2 928 aa5.48□□□□□ -1.53
COL6A5-203ENST00000373157 C1orf115Q9H7X2 142 aa5.48□□□□□ -1.53
COL6A5-203ENST00000373157 ARID3CA6NKF2 412 aa5.47□□□□□ -1.53
COL6A5-203ENST00000373157 ZBTB24O43167 697 aaPredicted RBP5.47□□□□□ -1.53
COL6A5-203ENST00000373157 DNAJB2P25686 324 aa5.47□□□□□ -1.53
COL6A5-203ENST00000373157 MCM6Q14566 821 aa5.47□□□□□ -1.53
COL6A5-203ENST00000373157 HPS1Q92902 700 aa5.47□□□□□ -1.53
COL6A5-203ENST00000373157 FCF1Q9Y324 198 aaKnown RBP5.47□□□□□ -1.53
COL6A5-203ENST00000373157 J3QL48 77 aa5.47□□□□□ -1.53
COL6A5-203ENST00000373157 CFHP08603 1231 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms