RNA–Protein interactions for RNA: ENST00000372998.1

LCN2-202, Transcript of lipocalin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LCN2, Length 631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-202ENST00000372998 BECN1Q14457 450 aa14.02□□□□□ -0.17
LCN2-202ENST00000372998 PNNQ9H307 717 aaKnown RBP14.01□□□□□ -0.17
LCN2-202ENST00000372998 MYH16Q9H6N6 1097 aa14.01□□□□□ -0.17
LCN2-202ENST00000372998 NOS1P29475 1434 aa14□□□□□ -0.17
LCN2-202ENST00000372998 EVC2Q86UK5 1308 aa14□□□□□ -0.17
LCN2-202ENST00000372998 ADGRF5Q8IZF2 1346 aa14□□□□□ -0.17
LCN2-202ENST00000372998 C20orf194Q5TEA3 1177 aa14□□□□□ -0.17
LCN2-202ENST00000372998 CLUAP1Q96AJ1 413 aa14□□□□□ -0.17
LCN2-202ENST00000372998 UPF2Q9HAU5 1272 aaKnown RBP14□□□□□ -0.17
LCN2-202ENST00000372998 ZFYVE9O95405 1425 aa13.99□□□□□ -0.17
LCN2-202ENST00000372998 POGZQ7Z3K3 1410 aa13.99□□□□□ -0.17
LCN2-202ENST00000372998 NSD3Q9BZ95 1437 aa13.99□□□□□ -0.17
LCN2-202ENST00000372998 VGFO15240 615 aaPredicted RBP13.99□□□□□ -0.17
LCN2-202ENST00000372998 C8orf34Q49A92 452 aa13.99□□□□□ -0.17
LCN2-202ENST00000372998 WWC1Q8IX03 1113 aa13.99□□□□□ -0.17
LCN2-202ENST00000372998 CAMSAP1Q5T5Y3 1602 aa13.99□□□□□ -0.17
LCN2-202ENST00000372998 ADGRB1O14514 1584 aa13.99□□□□□ -0.17
LCN2-202ENST00000372998 IQSEC2Q5JU85 1478 aa13.99□□□□□ -0.17
LCN2-202ENST00000372998 PIK3C2BO00750 1634 aa13.98□□□□□ -0.17
LCN2-202ENST00000372998 CARD14Q9BXL6 1004 aa13.98□□□□□ -0.17
LCN2-202ENST00000372998 NEO1Q92859 1461 aa13.98□□□□□ -0.17
LCN2-202ENST00000372998 ARHGAP31Q2M1Z3 1444 aa13.98□□□□□ -0.17
LCN2-202ENST00000372998 ANKRD36BQ8N2N9 1353 aa13.97□□□□□ -0.17
LCN2-202ENST00000372998 CCDC146Q8IYE0 955 aa13.97□□□□□ -0.17
LCN2-202ENST00000372998 PHF23Q9BUL5 403 aaPredicted RBP13.97□□□□□ -0.17
LCN2-202ENST00000372998 ANKRD26Q9UPS8 1709 aa13.97□□□□□ -0.17
LCN2-202ENST00000372998 GLI2P10070 1586 aa13.96□□□□□ -0.17
LCN2-202ENST00000372998 UGGT1Q9NYU2 1555 aa13.96□□□□□ -0.17
LCN2-202ENST00000372998 ABCC3O15438 1527 aa13.96□□□□□ -0.17
LCN2-202ENST00000372998 ARHGEF28Q8N1W1 1705 aaKnown RBP13.96□□□□□ -0.17
LCN2-202ENST00000372998 MED14O60244 1454 aa13.96□□□□□ -0.17
LCN2-202ENST00000372998 RWDD1Q9H446 243 aaPredicted RBP13.96□□□□□ -0.17
LCN2-202ENST00000372998 ADGRB2O60241 1585 aa13.96□□□□□ -0.18
LCN2-202ENST00000372998 ABCC11Q96J66 1382 aa13.96□□□□□ -0.18
LCN2-202ENST00000372998 GSE1Q14687 1217 aa13.95□□□□□ -0.18
LCN2-202ENST00000372998 LAS1LQ9Y4W2 734 aaKnown RBP13.95□□□□□ -0.18
LCN2-202ENST00000372998 NPATQ14207 1427 aa13.95□□□□□ -0.18
LCN2-202ENST00000372998 IL16Q14005 1332 aa13.93□□□□□ -0.18
LCN2-202ENST00000372998 CD109Q6YHK3 1445 aa13.93□□□□□ -0.18
LCN2-202ENST00000372998 EIF5BO60841 1220 aaKnown RBP13.93□□□□□ -0.18
LCN2-202ENST00000372998 CHMP4BQ9H444 224 aaKnown RBP13.93□□□□□ -0.18
LCN2-202ENST00000372998 NFKBIBQ15653 356 aa13.92□□□□□ -0.18
LCN2-202ENST00000372998 ATAD2Q6PL18 1390 aa13.92□□□□□ -0.18
LCN2-202ENST00000372998 FRMPD1Q5SYB0 1578 aa13.92□□□□□ -0.18
LCN2-202ENST00000372998 CLTCQ00610 1675 aaKnown RBP13.91□□□□□ -0.18
LCN2-202ENST00000372998 NEXMIFQ5QGS0 1516 aa13.91□□□□□ -0.18
LCN2-202ENST00000372998 BCAR3O75815 825 aa13.91□□□□□ -0.18
LCN2-202ENST00000372998 RGS3P49796 1198 aa13.91□□□□□ -0.18
LCN2-202ENST00000372998 RARSP54136 660 aaKnown RBP13.91□□□□□ -0.18
LCN2-202ENST00000372998 TCP11L2Q8N4U5 519 aa13.91□□□□□ -0.18
LCN2-202ENST00000372998 SLC52A1Q9NWF4 448 aa13.91□□□□□ -0.18
LCN2-202ENST00000372998 CHGAP10645 457 aaKnown RBP13.9□□□□□ -0.18
LCN2-202ENST00000372998 ZNF428Q96B54 188 aa13.89□□□□□ -0.19
LCN2-202ENST00000372998 TERF2IPQ9NYB0 399 aa13.89□□□□□ -0.19
LCN2-202ENST00000372998 TRAK1Q9UPV9 953 aa13.89□□□□□ -0.19
LCN2-202ENST00000372998 ZKSCAN2Q63HK3 967 aa13.88□□□□□ -0.19
LCN2-202ENST00000372998 SPINK5Q9NQ38 1064 aaPredicted RBP13.88□□□□□ -0.19
LCN2-202ENST00000372998 TULP4Q9NRJ4 1543 aa13.87□□□□□ -0.19
LCN2-202ENST00000372998 IPO8O15397 1037 aaKnown RBP13.87□□□□□ -0.19
LCN2-202ENST00000372998 MTHFSP49914 203 aa13.87□□□□□ -0.19
LCN2-202ENST00000372998 SLC12A5Q9H2X9 1139 aa13.86□□□□□ -0.19
LCN2-202ENST00000372998 DDX19BQ9UMR2 479 aa13.86□□□□□ -0.19
LCN2-202ENST00000372998 COG6Q9Y2V7 657 aa13.86□□□□□ -0.19
LCN2-202ENST00000372998 IGHDP01880 384 aa13.85□□□□□ -0.19
LCN2-202ENST00000372998 CALD1Q05682 793 aaKnown RBP13.85□□□□□ -0.19
LCN2-202ENST00000372998 MVPQ14764 893 aaKnown RBP13.85□□□□□ -0.19
LCN2-202ENST00000372998 FTSJ3Q8IY81 847 aaKnown RBP13.85□□□□□ -0.19
LCN2-202ENST00000372998 FRAT1Q92837 279 aaPredicted RBP13.85□□□□□ -0.19
LCN2-202ENST00000372998 CFAP65Q6ZU64 1925 aaKnown RBP13.84□□□□□ -0.19
LCN2-202ENST00000372998 DIP2CQ9Y2E4 1556 aa13.84□□□□□ -0.19
LCN2-202ENST00000372998 DZIP1LQ8IYY4 767 aaKnown RBP13.84□□□□□ -0.19
LCN2-202ENST00000372998 CFAP44Q96MT7 982 aa13.84□□□□□ -0.19
LCN2-202ENST00000372998 KIF20BQ96Q89 1820 aa13.84□□□□□ -0.19
LCN2-202ENST00000372998 KIF16BQ96L93 1317 aa13.84□□□□□ -0.19
LCN2-202ENST00000372998 U2AF1L5P0DN76 240 aaPredicted RBP13.83□□□□□ -0.2
LCN2-202ENST00000372998 U2AF1Q01081 240 aaKnown RBP eCLIP13.83□□□□□ -0.2
LCN2-202ENST00000372998 HDAC1Q13547 482 aaPredicted RBP13.83□□□□□ -0.2
LCN2-202ENST00000372998 GGT6Q6P531 493 aa13.83□□□□□ -0.2
LCN2-202ENST00000372998 PANK1Q8TE04 598 aa13.83□□□□□ -0.2
LCN2-202ENST00000372998 SIGLEC1Q9BZZ2 1709 aa13.83□□□□□ -0.2
LCN2-202ENST00000372998 CDC42BPGQ6DT37 1551 aa13.83□□□□□ -0.2
LCN2-202ENST00000372998 PREX1Q8TCU6 1659 aa13.82□□□□□ -0.2
LCN2-202ENST00000372998 L1TD1Q5T7N2 865 aaKnown RBP13.82□□□□□ -0.2
LCN2-202ENST00000372998 HDGFL2Q7Z4V5 671 aaPredicted RBP13.82□□□□□ -0.2
LCN2-202ENST00000372998 PPP6R1Q9UPN7 881 aa13.82□□□□□ -0.2
LCN2-202ENST00000372998 RICTORQ6R327 1708 aa13.81□□□□□ -0.2
LCN2-202ENST00000372998 ALDH1L2Q3SY69 923 aa13.81□□□□□ -0.2
LCN2-202ENST00000372998 DLC1Q96QB1 1528 aa13.8□□□□□ -0.2
LCN2-202ENST00000372998 REREQ9P2R6 1566 aa13.8□□□□□ -0.2
LCN2-202ENST00000372998 TBC1D32Q96NH3 1257 aa13.8□□□□□ -0.2
LCN2-202ENST00000372998 TMEM131LA2VDJ0 1609 aa13.79□□□□□ -0.2
LCN2-202ENST00000372998 PTMSP20962 102 aa13.79□□□□□ -0.2
LCN2-202ENST00000372998 PDZRN3Q9UPQ7 1066 aa13.79□□□□□ -0.2
LCN2-202ENST00000372998 DMRT2Q9Y5R5 561 aa13.79□□□□□ -0.2
LCN2-202ENST00000372998 USP19O94966 1318 aa13.79□□□□□ -0.2
LCN2-202ENST00000372998 COL3A1P02461 1466 aaPredicted RBP13.79□□□□□ -0.2
LCN2-202ENST00000372998 TMPOP42166 694 aaKnown RBP13.78□□□□□ -0.2
LCN2-202ENST00000372998 BRPF1P55201 1214 aaPredicted RBP13.78□□□□□ -0.2
LCN2-202ENST00000372998 NEUROD2Q15784 382 aa13.78□□□□□ -0.2
LCN2-202ENST00000372998 NLRP1Q9C000 1473 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms