RNA–Protein interactions for RNA: ENST00000372899.5

UBR2-201, Transcript of ubiquitin protein ligase E3 component n-recognin 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBR2, Length 7,857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR2-201ENST00000372899 MPHOSPH9Q99550 1183 aa17.3■□□□□ 0.36
UBR2-201ENST00000372899 CYB5RLQ6IPT4 315 aa17.3■□□□□ 0.36
UBR2-201ENST00000372899 FKBP5Q13451 457 aaPredicted RBP17.3■□□□□ 0.36
UBR2-201ENST00000372899 SKIDA1Q1XH10 827 aa17.3■□□□□ 0.36
UBR2-201ENST00000372899 RSPH4AQ5TD94 716 aa17.3■□□□□ 0.36
UBR2-201ENST00000372899 NOM1Q5C9Z4 860 aaKnown RBP17.29■□□□□ 0.36
UBR2-201ENST00000372899 PDILTQ8N807 584 aa17.29■□□□□ 0.36
UBR2-201ENST00000372899 CCDC73Q6ZRK6 1079 aa17.29■□□□□ 0.36
UBR2-201ENST00000372899 GNL3LQ9NVN8 582 aaKnown RBP17.29■□□□□ 0.36
UBR2-201ENST00000372899 NINLQ9Y2I6 1382 aa17.29■□□□□ 0.36
UBR2-201ENST00000372899 ERLIN2O94905 339 aa17.29■□□□□ 0.36
UBR2-201ENST00000372899 MINK1Q8N4C8 1332 aaPredicted RBP17.28■□□□□ 0.36
UBR2-201ENST00000372899 SMC3Q9UQE7 1217 aa17.28■□□□□ 0.36
UBR2-201ENST00000372899 NLRP2Q9NX02 1062 aa17.28■□□□□ 0.36
UBR2-201ENST00000372899 HSP90B2PQ58FF3 399 aa17.28■□□□□ 0.36
UBR2-201ENST00000372899 CCDC18Q5T9S5 1454 aa17.27■□□□□ 0.36
UBR2-201ENST00000372899 VPS37CA5D8V6 355 aaPredicted RBP17.27■□□□□ 0.36
UBR2-201ENST00000372899 ZKSCAN2Q63HK3 967 aa17.27■□□□□ 0.36
UBR2-201ENST00000372899 KDM4AO75164 1064 aa17.27■□□□□ 0.35
UBR2-201ENST00000372899 ARGLU1Q9NWB6 273 aaPredicted RBP17.26■□□□□ 0.35
UBR2-201ENST00000372899 TNIKQ9UKE5 1360 aa17.26■□□□□ 0.35
UBR2-201ENST00000372899 TSPYL4Q9UJ04 414 aa17.26■□□□□ 0.35
UBR2-201ENST00000372899 TIMELESSQ9UNS1 1208 aa17.26■□□□□ 0.35
UBR2-201ENST00000372899 NUTM2BA6NNL0 878 aaPredicted RBP17.26■□□□□ 0.35
UBR2-201ENST00000372899 NUTM2EB1AL46 878 aaPredicted RBP17.26■□□□□ 0.35
UBR2-201ENST00000372899 TTLL5Q6EMB2 1281 aa17.26■□□□□ 0.35
UBR2-201ENST00000372899 NUTM2AQ8IVF1 878 aaPredicted RBP17.26■□□□□ 0.35
UBR2-201ENST00000372899 MNS1Q8NEH6 495 aa17.26■□□□□ 0.35
UBR2-201ENST00000372899 SMARCE1Q969G3 411 aa17.25■□□□□ 0.35
UBR2-201ENST00000372899 RBM42Q9BTD8 480 aaKnown RBP17.24■□□□□ 0.35
UBR2-201ENST00000372899 ERC1Q8IUD2 1116 aa17.24■□□□□ 0.35
UBR2-201ENST00000372899 SMG6Q86US8 1419 aaKnown RBP17.24■□□□□ 0.35
UBR2-201ENST00000372899 FMN1Q68DA7 1419 aa17.24■□□□□ 0.35
UBR2-201ENST00000372899 WDR70Q9NW82 654 aa17.23■□□□□ 0.35
UBR2-201ENST00000372899 BCL2L13Q9BXK5 485 aa17.23■□□□□ 0.35
UBR2-201ENST00000372899 STRN4Q9NRL3 753 aa17.23■□□□□ 0.35
UBR2-201ENST00000372899 GBP2P32456 591 aaPredicted RBP17.23■□□□□ 0.35
UBR2-201ENST00000372899 FILIP1LQ4L180 1135 aa17.23■□□□□ 0.35
UBR2-201ENST00000372899 CNNM1Q9NRU3 951 aa17.23■□□□□ 0.35
UBR2-201ENST00000372899 KIF15Q9NS87 1388 aa17.22■□□□□ 0.35
UBR2-201ENST00000372899 ERCC4Q92889 916 aaPredicted RBP17.22■□□□□ 0.35
UBR2-201ENST00000372899 CCDC144AA2RUR9 1427 aa17.22■□□□□ 0.35
UBR2-201ENST00000372899 HMGB2P26583 209 aaKnown RBP17.22■□□□□ 0.35
UBR2-201ENST00000372899 ENOX2Q16206 610 aaKnown RBP17.22■□□□□ 0.35
UBR2-201ENST00000372899 EZRP15311 586 aaKnown RBP17.22■□□□□ 0.35
UBR2-201ENST00000372899 ZHX3Q9H4I2 956 aa17.22■□□□□ 0.35
UBR2-201ENST00000372899 PSMA5P28066 241 aa17.21■□□□□ 0.35
UBR2-201ENST00000372899 NLRP13Q86W25 1043 aa17.21■□□□□ 0.35
UBR2-201ENST00000372899 DIAPH1O60610 1272 aaKnown RBP17.21■□□□□ 0.35
UBR2-201ENST00000372899 ZSCAN29Q8IWY8 852 aaPredicted RBP17.21■□□□□ 0.35
UBR2-201ENST00000372899 TTC39AQ5SRH9 613 aa17.21■□□□□ 0.35
UBR2-201ENST00000372899 GPRASP1Q5JY77 1395 aa17.2■□□□□ 0.34
UBR2-201ENST00000372899 MYCNP04198 464 aaPredicted RBP17.2■□□□□ 0.34
UBR2-201ENST00000372899 SOGA1O94964 1423 aa17.2■□□□□ 0.34
UBR2-201ENST00000372899 PIP4K2BP78356 416 aa17.2■□□□□ 0.34
UBR2-201ENST00000372899 PDE3BQ13370 1112 aa17.19■□□□□ 0.34
UBR2-201ENST00000372899 INTS3Q68E01 1043 aaKnown RBP17.19■□□□□ 0.34
UBR2-201ENST00000372899 H0YHG0 523 aa17.19■□□□□ 0.34
UBR2-201ENST00000372899 LUC7LQ9NQ29 371 aaKnown RBP17.19■□□□□ 0.34
UBR2-201ENST00000372899 E9PSI1 815 aa17.19■□□□□ 0.34
UBR2-201ENST00000372899 DRC1Q96MC2 740 aa17.18■□□□□ 0.34
UBR2-201ENST00000372899 API5Q9BZZ5 524 aaKnown RBP17.18■□□□□ 0.34
UBR2-201ENST00000372899 CNTROBQ8N137 903 aa17.18■□□□□ 0.34
UBR2-201ENST00000372899 IFT57Q9NWB7 429 aa17.18■□□□□ 0.34
UBR2-201ENST00000372899 CHMP4BP1P59074 171 aa17.18■□□□□ 0.34
UBR2-201ENST00000372899 CENPQQ7L2Z9 268 aaPredicted RBP17.18■□□□□ 0.34
UBR2-201ENST00000372899 DDX19BQ9UMR2 479 aa17.18■□□□□ 0.34
UBR2-201ENST00000372899 HSP90AA2PQ14568 343 aaPredicted RBP17.17■□□□□ 0.34
UBR2-201ENST00000372899 MIA2Q96PC5 1412 aa17.17■□□□□ 0.34
UBR2-201ENST00000372899 RIPK4P57078 832 aa17.17■□□□□ 0.34
UBR2-201ENST00000372899 GOLGA6L10A6NI86 522 aa17.17■□□□□ 0.34
UBR2-201ENST00000372899 BRPF1P55201 1214 aaPredicted RBP17.17■□□□□ 0.34
UBR2-201ENST00000372899 TTLL12Q14166 644 aaPredicted RBP17.17■□□□□ 0.34
UBR2-201ENST00000372899 NUTM2GQ5VZR2 741 aa17.17■□□□□ 0.34
UBR2-201ENST00000372899 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.17■□□□□ 0.341e-6■■■□□ 15.3
UBR2-201ENST00000372899 ZNF76P36508 570 aa17.17■□□□□ 0.34
UBR2-201ENST00000372899 ZNHIT6Q9NWK9 470 aaKnown RBP17.16■□□□□ 0.34
UBR2-201ENST00000372899 STIM1Q13586 685 aa17.16■□□□□ 0.34
UBR2-201ENST00000372899 PLCD4Q9BRC7 762 aa17.16■□□□□ 0.34
UBR2-201ENST00000372899 SDF4Q9BRK5 362 aa17.16■□□□□ 0.34
UBR2-201ENST00000372899 SCLT1Q96NL6 688 aa17.16■□□□□ 0.34
UBR2-201ENST00000372899 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.15■□□□□ 0.34
UBR2-201ENST00000372899 GRIPAP1Q4V328 841 aa17.15■□□□□ 0.34
UBR2-201ENST00000372899 UBTFL1P0CB47 393 aaPredicted RBP17.15■□□□□ 0.34
UBR2-201ENST00000372899 HMGN5P82970 282 aaKnown RBP17.15■□□□□ 0.34
UBR2-201ENST00000372899 SOGA3Q5TF21 947 aa17.15■□□□□ 0.34
UBR2-201ENST00000372899 PIP4K2AP48426 406 aaPredicted RBP17.15■□□□□ 0.34
UBR2-201ENST00000372899 CCDC158Q5M9N0 1113 aa17.15■□□□□ 0.34
UBR2-201ENST00000372899 PANK3Q9H999 370 aa17.15■□□□□ 0.34
UBR2-201ENST00000372899 TXLNBQ8N3L3 684 aa17.14■□□□□ 0.34
UBR2-201ENST00000372899 BAZ1AQ9NRL2 1556 aaPredicted RBP17.14■□□□□ 0.33
UBR2-201ENST00000372899 IPO9Q96P70 1041 aaKnown RBP17.14■□□□□ 0.33
UBR2-201ENST00000372899 DNAJC2Q99543 621 aaKnown RBP17.14■□□□□ 0.33
UBR2-201ENST00000372899 TANGO6Q9C0B7 1094 aa17.14■□□□□ 0.33
UBR2-201ENST00000372899 SEPT11Q9NVA2 429 aaKnown RBP17.14■□□□□ 0.33
UBR2-201ENST00000372899 TMOD2Q9NZR1 351 aa17.13■□□□□ 0.33
UBR2-201ENST00000372899 ATP2B1P20020 1258 aa17.13■□□□□ 0.33
UBR2-201ENST00000372899 DEF6Q9H4E7 631 aa17.13■□□□□ 0.33
UBR2-201ENST00000372899 RBM19Q9Y4C8 960 aaKnown RBP17.13■□□□□ 0.33
UBR2-201ENST00000372899 PPP4R3AQ6IN85 833 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms