RNA–Protein interactions for RNA: ENST00000372577.2

NUP188-201, Transcript of nucleoporin 188, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP188, Length 5,689 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-201ENST00000372577 HMOX1P09601 288 aa12.86□□□□□ -0.35
NUP188-201ENST00000372577 ZKSCAN1P17029 563 aaPredicted RBP12.86□□□□□ -0.35
NUP188-201ENST00000372577 THEMISQ8N1K5 641 aaPredicted RBP12.86□□□□□ -0.35
NUP188-201ENST00000372577 CHMP5Q9NZZ3 219 aa12.86□□□□□ -0.35
NUP188-201ENST00000372577 RAPGEF4Q8WZA2 1011 aa12.86□□□□□ -0.35
NUP188-201ENST00000372577 EIF2S2P20042 333 aaKnown RBP12.85□□□□□ -0.35
NUP188-201ENST00000372577 IFIT2P09913 472 aaKnown RBP12.85□□□□□ -0.35
NUP188-201ENST00000372577 TXNDC2Q86VQ3 553 aa12.85□□□□□ -0.35
NUP188-201ENST00000372577 ATF3P18847 181 aa12.85□□□□□ -0.35
NUP188-201ENST00000372577 ERC2O15083 957 aa12.84□□□□□ -0.35
NUP188-201ENST00000372577 ZNF428Q96B54 188 aa12.84□□□□□ -0.35
NUP188-201ENST00000372577 RTEL1-TNFRSF6BF6WH68 1400 aa12.84□□□□□ -0.35
NUP188-201ENST00000372577 NLRP6P59044 892 aa12.84□□□□□ -0.35
NUP188-201ENST00000372577 RNF20Q5VTR2 975 aa12.84□□□□□ -0.35
NUP188-201ENST00000372577 CDK19Q9BWU1 502 aa12.84□□□□□ -0.35
NUP188-201ENST00000372577 GNAI3P08754 354 aa12.84□□□□□ -0.35
NUP188-201ENST00000372577 G3BP1Q13283 466 aaKnown RBP eCLIP12.84□□□□□ -0.351e-6■■■□□ 17.6
NUP188-201ENST00000372577 ADGRL1O94910 1474 aa12.84□□□□□ -0.35
NUP188-201ENST00000372577 PANK1Q8TE04 598 aa12.83□□□□□ -0.36
NUP188-201ENST00000372577 CCDC30Q5VVM6 783 aa12.83□□□□□ -0.36
NUP188-201ENST00000372577 SLC12A5Q9H2X9 1139 aa12.83□□□□□ -0.36
NUP188-201ENST00000372577 ITSN2Q9NZM3 1697 aa12.83□□□□□ -0.36
NUP188-201ENST00000372577 UGGT2Q9NYU1 1516 aa12.83□□□□□ -0.36
NUP188-201ENST00000372577 CD109Q6YHK3 1445 aa12.83□□□□□ -0.36
NUP188-201ENST00000372577 GTF2E1P29083 439 aaPredicted RBP12.83□□□□□ -0.36
NUP188-201ENST00000372577 PRKAR2BP31323 418 aa12.83□□□□□ -0.36
NUP188-201ENST00000372577 RAPGEF6Q8TEU7 1601 aa12.83□□□□□ -0.36
NUP188-201ENST00000372577 FAM135AQ9P2D6 1515 aa12.83□□□□□ -0.36
NUP188-201ENST00000372577 CTTNBP2Q8WZ74 1663 aa12.82□□□□□ -0.36
NUP188-201ENST00000372577 CDC45O75419 566 aa12.82□□□□□ -0.36
NUP188-201ENST00000372577 GSE1Q14687 1217 aa12.82□□□□□ -0.36
NUP188-201ENST00000372577 GCC1Q96CN9 775 aa12.82□□□□□ -0.36
NUP188-201ENST00000372577 CDCA7LQ96GN5 454 aa12.82□□□□□ -0.36
NUP188-201ENST00000372577 FOXD4L1Q9NU39 408 aa12.82□□□□□ -0.36
NUP188-201ENST00000372577 ISY1Q9ULR0 285 aaKnown RBP12.82□□□□□ -0.36
NUP188-201ENST00000372577 NUCB2P80303 420 aa12.82□□□□□ -0.36
NUP188-201ENST00000372577 DDX49Q9Y6V7 483 aaKnown RBP12.82□□□□□ -0.36
NUP188-201ENST00000372577 NOL8Q76FK4 1167 aaKnown RBP12.82□□□□□ -0.36
NUP188-201ENST00000372577 FAM184AQ8NB25 1140 aa12.82□□□□□ -0.36
NUP188-201ENST00000372577 H3BQV1 296 aa12.81□□□□□ -0.36
NUP188-201ENST00000372577 IFFO2Q5TF58 517 aa12.81□□□□□ -0.36
NUP188-201ENST00000372577 CPLX2Q6PUV4 134 aaKnown RBP12.81□□□□□ -0.36
NUP188-201ENST00000372577 C22orf23Q9BZE7 217 aa12.81□□□□□ -0.36
NUP188-201ENST00000372577 PLEKHO1Q53GL0 409 aaPredicted RBP12.8□□□□□ -0.36
NUP188-201ENST00000372577 UBTFL1P0CB47 393 aaPredicted RBP12.8□□□□□ -0.36
NUP188-201ENST00000372577 EXOSC9Q06265 439 aaKnown RBP12.8□□□□□ -0.36
NUP188-201ENST00000372577 SF3A1Q15459 793 aaKnown RBP12.8□□□□□ -0.36
NUP188-201ENST00000372577 LNPKQ9C0E8 428 aa12.79□□□□□ -0.36
NUP188-201ENST00000372577 PPP6R1Q9UPN7 881 aa12.79□□□□□ -0.36
NUP188-201ENST00000372577 FRAT2O75474 233 aaPredicted RBP12.79□□□□□ -0.36
NUP188-201ENST00000372577 GPATCH8Q9UKJ3 1502 aaKnown RBP12.79□□□□□ -0.36
NUP188-201ENST00000372577 ZNF608Q9ULD9 1512 aaPredicted RBP12.79□□□□□ -0.36
NUP188-201ENST00000372577 TWISTNBQ3B726 338 aaPredicted RBP12.79□□□□□ -0.36
NUP188-201ENST00000372577 WWC1Q8IX03 1113 aa12.79□□□□□ -0.36
NUP188-201ENST00000372577 CABP1Q9NZU7 370 aa12.79□□□□□ -0.36
NUP188-201ENST00000372577 FCHSD2O94868 740 aa12.79□□□□□ -0.36
NUP188-201ENST00000372577 SYNE3Q6ZMZ3 975 aa12.78□□□□□ -0.36
NUP188-201ENST00000372577 ABTB2Q8N961 1025 aa12.78□□□□□ -0.36
NUP188-201ENST00000372577 RAPGEF3O95398 923 aa12.78□□□□□ -0.36
NUP188-201ENST00000372577 NSD3Q9BZ95 1437 aa12.78□□□□□ -0.36
NUP188-201ENST00000372577 SCAF11Q99590 1463 aaKnown RBP12.77□□□□□ -0.36
NUP188-201ENST00000372577 ANO2Q9NQ90 1003 aa12.77□□□□□ -0.36
NUP188-201ENST00000372577 TOMM22Q9NS69 142 aa12.77□□□□□ -0.36
NUP188-201ENST00000372577 SLC4A3P48751 1232 aa12.76□□□□□ -0.37
NUP188-201ENST00000372577 RIC3Q7Z5B4 369 aa12.76□□□□□ -0.37
NUP188-201ENST00000372577 CFAP43Q8NDM7 1665 aa12.76□□□□□ -0.37
NUP188-201ENST00000372577 G3V3G9 751 aa12.76□□□□□ -0.37
NUP188-201ENST00000372577 CCT4P50991 539 aaKnown RBP12.76□□□□□ -0.37
NUP188-201ENST00000372577 DCAF8Q5TAQ9 597 aa12.76□□□□□ -0.37
NUP188-201ENST00000372577 ABCC11Q96J66 1382 aa12.76□□□□□ -0.37
NUP188-201ENST00000372577 TCOF1Q13428 1488 aaKnown RBP12.76□□□□□ -0.37
NUP188-201ENST00000372577 NSD2O96028 1365 aa12.76□□□□□ -0.37
NUP188-201ENST00000372577 NECTIN2Q92692 538 aa12.76□□□□□ -0.37
NUP188-201ENST00000372577 AKAP17AQ02040 695 aaKnown RBP12.75□□□□□ -0.37
NUP188-201ENST00000372577 TULP1O00294 542 aaPredicted RBP12.75□□□□□ -0.37
NUP188-201ENST00000372577 NLRP2Q9NX02 1062 aa12.75□□□□□ -0.37
NUP188-201ENST00000372577 MCM2P49736 904 aa12.75□□□□□ -0.37
NUP188-201ENST00000372577 ERC1Q8IUD2 1116 aa12.75□□□□□ -0.37
NUP188-201ENST00000372577 FANCAO15360 1455 aa12.75□□□□□ -0.37
NUP188-201ENST00000372577 HIP1O00291 1037 aa12.75□□□□□ -0.37
NUP188-201ENST00000372577 CNTROBQ8N137 903 aa12.75□□□□□ -0.37
NUP188-201ENST00000372577 DHX29Q7Z478 1369 aaKnown RBP12.74□□□□□ -0.37
NUP188-201ENST00000372577 SLFN5Q08AF3 891 aa12.74□□□□□ -0.37
NUP188-201ENST00000372577 ATF7IPQ6VMQ6 1270 aa12.74□□□□□ -0.37
NUP188-201ENST00000372577 AMOTL1Q8IY63 956 aa12.74□□□□□ -0.37
NUP188-201ENST00000372577 DUOX2Q9NRD8 1548 aa12.74□□□□□ -0.37
NUP188-201ENST00000372577 PDZRN3Q9UPQ7 1066 aa12.74□□□□□ -0.37
NUP188-201ENST00000372577 MVPQ14764 893 aaKnown RBP12.74□□□□□ -0.37
NUP188-201ENST00000372577 NUP160Q12769 1436 aa12.74□□□□□ -0.37
NUP188-201ENST00000372577 TRDNQ13061 729 aa12.74□□□□□ -0.37
NUP188-201ENST00000372577 GNAI2P04899 355 aa12.73□□□□□ -0.37
NUP188-201ENST00000372577 NOB1Q9ULX3 412 aaKnown RBP12.73□□□□□ -0.37
NUP188-201ENST00000372577 CCDC61Q9Y6R9 512 aa12.73□□□□□ -0.37
NUP188-201ENST00000372577 DENND4BO75064 1496 aaPredicted RBP12.73□□□□□ -0.37
NUP188-201ENST00000372577 CLASRPQ8N2M8 674 aaKnown RBP12.73□□□□□ -0.37
NUP188-201ENST00000372577 RASSF8Q8NHQ8 419 aa12.73□□□□□ -0.37
NUP188-201ENST00000372577 ADAMTS12P58397 1594 aa12.73□□□□□ -0.37
NUP188-201ENST00000372577 NOL10Q9BSC4 688 aaKnown RBP12.73□□□□□ -0.37
NUP188-201ENST00000372577 ESCO1Q5FWF5 840 aa12.73□□□□□ -0.37
NUP188-201ENST00000372577 TRIM29Q14134 588 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms