RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.13■■□□□ 1.13
TMEM53-204ENST00000372243 NCOA3Q9Y6Q9 1424 aa22.11■■□□□ 1.13
TMEM53-204ENST00000372243 CDCA8Q53HL2 280 aa22.11■■□□□ 1.13
TMEM53-204ENST00000372243 ZNF335Q9H4Z2 1342 aaPredicted RBP22.11■■□□□ 1.13
TMEM53-204ENST00000372243 DISP3Q9P2K9 1392 aa22.11■■□□□ 1.13
TMEM53-204ENST00000372243 TULP4Q9NRJ4 1543 aa22.1■■□□□ 1.13
TMEM53-204ENST00000372243 C11orf95C9JLR9 678 aaPredicted RBP22.1■■□□□ 1.13
TMEM53-204ENST00000372243 EVC2Q86UK5 1308 aa22.1■■□□□ 1.13
TMEM53-204ENST00000372243 MINK1Q8N4C8 1332 aaPredicted RBP22.1■■□□□ 1.13
TMEM53-204ENST00000372243 PROSER2Q86WR7 435 aaPredicted RBP22.09■■□□□ 1.13
TMEM53-204ENST00000372243 PUS7Q96PZ0 661 aaKnown RBP22.09■■□□□ 1.13
TMEM53-204ENST00000372243 CCDC7Q96M83 1385 aa22.08■■□□□ 1.12
TMEM53-204ENST00000372243 KIF7Q2M1P5 1343 aa22.08■■□□□ 1.12
TMEM53-204ENST00000372243 WASHC2AQ641Q2 1341 aa22.08■■□□□ 1.12
TMEM53-204ENST00000372243 ADGRL3Q9HAR2 1447 aa22.07■■□□□ 1.12
TMEM53-204ENST00000372243 NALCNQ8IZF0 1738 aa22.07■■□□□ 1.12
TMEM53-204ENST00000372243 LRRC7Q96NW7 1537 aa22.05■■□□□ 1.12
TMEM53-204ENST00000372243 TMEM94Q12767 1356 aa22.05■■□□□ 1.12
TMEM53-204ENST00000372243 CDC42BPGQ6DT37 1551 aa22.05■■□□□ 1.12
TMEM53-204ENST00000372243 WASLO00401 505 aaPredicted RBP22.04■■□□□ 1.12
TMEM53-204ENST00000372243 LTBP4Q8N2S1 1624 aa22.03■■□□□ 1.12
TMEM53-204ENST00000372243 CDK19Q9BWU1 502 aa22.03■■□□□ 1.12
TMEM53-204ENST00000372243 XIRP1Q702N8 1843 aaKnown RBP22.02■■□□□ 1.12
TMEM53-204ENST00000372243 C19orf44Q9H6X5 657 aa22■■□□□ 1.11
TMEM53-204ENST00000372243 DCCP43146 1447 aa22■■□□□ 1.11
TMEM53-204ENST00000372243 SRPK2P78362 688 aaKnown RBP21.99■■□□□ 1.11
TMEM53-204ENST00000372243 RBM33Q96EV2 1170 aaKnown RBP21.99■■□□□ 1.11
TMEM53-204ENST00000372243 ATAD2Q6PL18 1390 aa21.99■■□□□ 1.11
TMEM53-204ENST00000372243 FMN2Q9NZ56 1722 aa21.99■■□□□ 1.11
TMEM53-204ENST00000372243 C14orf37Q86TY3 774 aa21.99■■□□□ 1.11
TMEM53-204ENST00000372243 CABP2Q9NPB3 220 aa21.98■■□□□ 1.11
TMEM53-204ENST00000372243 MYOM1P52179 1685 aa21.96■■□□□ 1.11
TMEM53-204ENST00000372243 NINLQ9Y2I6 1382 aa21.96■■□□□ 1.11
TMEM53-204ENST00000372243 ANKARQ7Z5J8 1434 aa21.95■■□□□ 1.11
TMEM53-204ENST00000372243 ATP7BP35670 1465 aa21.95■■□□□ 1.1
TMEM53-204ENST00000372243 MSH6P52701 1360 aa21.95■■□□□ 1.1
TMEM53-204ENST00000372243 POLR3GLQ9BT43 218 aa21.95■■□□□ 1.1
TMEM53-204ENST00000372243 USP32Q8NFA0 1604 aa21.93■■□□□ 1.1
TMEM53-204ENST00000372243 NUDT16Q96DE0 195 aaKnown RBP21.93■■□□□ 1.1
TMEM53-204ENST00000372243 TOPAZ1Q8N9V7 1692 aa21.92■■□□□ 1.1
TMEM53-204ENST00000372243 ITSN1Q15811 1721 aa21.92■■□□□ 1.1
TMEM53-204ENST00000372243 CCDC61Q9Y6R9 512 aa21.91■■□□□ 1.1
TMEM53-204ENST00000372243 PRR36Q9H6K5 1346 aa21.91■■□□□ 1.1
TMEM53-204ENST00000372243 CADPS2Q86UW7 1296 aa21.91■■□□□ 1.1
TMEM53-204ENST00000372243 ATF3P18847 181 aa21.9■■□□□ 1.1
TMEM53-204ENST00000372243 DDX10Q13206 875 aaKnown RBP21.9■■□□□ 1.1
TMEM53-204ENST00000372243 PPIP5K1Q6PFW1 1433 aa21.88■■□□□ 1.09
TMEM53-204ENST00000372243 RGPD8O14715 1765 aaPredicted RBP21.88■■□□□ 1.09
TMEM53-204ENST00000372243 MST1RQ04912 1400 aa21.87■■□□□ 1.09
TMEM53-204ENST00000372243 TMC1Q8TDI8 760 aa21.87■■□□□ 1.09
TMEM53-204ENST00000372243 SLC12A5Q9H2X9 1139 aa21.87■■□□□ 1.09
TMEM53-204ENST00000372243 NUTM2FA1L443 756 aa21.86■■□□□ 1.09
TMEM53-204ENST00000372243 CABP1Q9NZU7 370 aa21.86■■□□□ 1.09
TMEM53-204ENST00000372243 PLEKHG3A1L390 1219 aa21.85■■□□□ 1.09
TMEM53-204ENST00000372243 IQSEC2Q5JU85 1478 aa21.85■■□□□ 1.09
TMEM53-204ENST00000372243 C1orf167Q5SNV9 1468 aa21.85■■□□□ 1.09
TMEM53-204ENST00000372243 ANKRD36BQ8N2N9 1353 aa21.84■■□□□ 1.09
TMEM53-204ENST00000372243 TERF2IPQ9NYB0 399 aa21.83■■□□□ 1.09
TMEM53-204ENST00000372243 CD163L1Q9NR16 1453 aa21.83■■□□□ 1.09
TMEM53-204ENST00000372243 PANK3Q9H999 370 aa21.82■■□□□ 1.08
TMEM53-204ENST00000372243 CPSF1Q10570 1443 aaKnown RBP21.82■■□□□ 1.08
TMEM53-204ENST00000372243 POLR3AO14802 1390 aaPredicted RBP21.81■■□□□ 1.08
TMEM53-204ENST00000372243 AKAP12Q02952 1782 aa21.8■■□□□ 1.08
TMEM53-204ENST00000372243 A0A1W2PP64 1363 aa21.8■■□□□ 1.08
TMEM53-204ENST00000372243 KIF1AQ12756 1690 aa21.8■■□□□ 1.08
TMEM53-204ENST00000372243 HDGFL2Q7Z4V5 671 aaPredicted RBP21.79■■□□□ 1.08
TMEM53-204ENST00000372243 ZNF692Q9BU19 519 aaPredicted RBP21.79■■□□□ 1.08
TMEM53-204ENST00000372243 PER1O15534 1290 aaPredicted RBP21.78■■□□□ 1.08
TMEM53-204ENST00000372243 ESCO1Q5FWF5 840 aa21.78■■□□□ 1.08
TMEM53-204ENST00000372243 PHF8Q9UPP1 1060 aa21.78■■□□□ 1.08
TMEM53-204ENST00000372243 ACEP12821 1306 aa21.78■■□□□ 1.08
TMEM53-204ENST00000372243 SLAIN2Q9P270 581 aa21.78■■□□□ 1.08
TMEM53-204ENST00000372243 MON2Q7Z3U7 1717 aa21.77■■□□□ 1.08
TMEM53-204ENST00000372243 DIEXFQ68CQ4 756 aaKnown RBP21.76■■□□□ 1.07
TMEM53-204ENST00000372243 ORAI2Q96SN7 254 aa21.76■■□□□ 1.07
TMEM53-204ENST00000372243 PMFBP1Q8TBY8 1022 aa21.75■■□□□ 1.07
TMEM53-204ENST00000372243 CARD14Q9BXL6 1004 aa21.75■■□□□ 1.07
TMEM53-204ENST00000372243 KTN1Q86UP2 1357 aaKnown RBP21.75■■□□□ 1.07
TMEM53-204ENST00000372243 NGDNQ8NEJ9 315 aaKnown RBP21.74■■□□□ 1.07
TMEM53-204ENST00000372243 CERKQ8TCT0 537 aa21.74■■□□□ 1.07
TMEM53-204ENST00000372243 KNSTRNQ9Y448 316 aa21.74■■□□□ 1.07
TMEM53-204ENST00000372243 BRD4O60885 1362 aaPredicted RBP21.73■■□□□ 1.07
TMEM53-204ENST00000372243 USP6P35125 1406 aa21.73■■□□□ 1.07
TMEM53-204ENST00000372243 EDC4Q6P2E9 1401 aaKnown RBP21.73■■□□□ 1.07
TMEM53-204ENST00000372243 NSD3Q9BZ95 1437 aa21.73■■□□□ 1.07
TMEM53-204ENST00000372243 NRKQ7Z2Y5 1582 aa21.72■■□□□ 1.07
TMEM53-204ENST00000372243 NPC1L1Q9UHC9 1359 aa21.71■■□□□ 1.07
TMEM53-204ENST00000372243 BRINP3Q76B58 766 aa21.7■■□□□ 1.06
TMEM53-204ENST00000372243 SSH2Q76I76 1423 aa21.7■■□□□ 1.06
TMEM53-204ENST00000372243 TOM1O60784 492 aa21.7■■□□□ 1.06
TMEM53-204ENST00000372243 AMER1Q5JTC6 1135 aaPredicted RBP21.68■■□□□ 1.06
TMEM53-204ENST00000372243 CGNL1Q0VF96 1302 aa21.68■■□□□ 1.06
TMEM53-204ENST00000372243 NPHP3Q7Z494 1330 aa21.67■■□□□ 1.06
TMEM53-204ENST00000372243 FOXO3O43524 673 aa21.67■■□□□ 1.06
TMEM53-204ENST00000372243 NSD2O96028 1365 aa21.66■■□□□ 1.06
TMEM53-204ENST00000372243 PSME1Q06323 249 aa21.66■■□□□ 1.06
TMEM53-204ENST00000372243 TTC21AQ8NDW8 1320 aa21.66■■□□□ 1.06
TMEM53-204ENST00000372243 TTC21BQ7Z4L5 1316 aa21.65■■□□□ 1.06
TMEM53-204ENST00000372243 ROBO1Q9Y6N7 1651 aa21.65■■□□□ 1.06
TMEM53-204ENST00000372243 NHSL1Q5SYE7 1610 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms