RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 CDC42BPGQ6DT37 1551 aa27.67■■■□□ 2.02
TMEM53-201ENST00000372235 KNDC1Q76NI1 1749 aa27.67■■■□□ 2.02
TMEM53-201ENST00000372235 YTHDC2Q9H6S0 1430 aaKnown RBP27.67■■■□□ 2.02
TMEM53-201ENST00000372235 TMEM132EQ6IEE7 984 aa27.65■■■□□ 2.02
TMEM53-201ENST00000372235 POTEAQ6S8J7 498 aa27.62■■■□□ 2.01
TMEM53-201ENST00000372235 WAPLQ7Z5K2 1190 aa27.61■■■□□ 2.01
TMEM53-201ENST00000372235 ORAI2Q96SN7 254 aa27.61■■■□□ 2.01
TMEM53-201ENST00000372235 SOS2Q07890 1332 aaPredicted RBP27.61■■■□□ 2.01
TMEM53-201ENST00000372235 NPHP3Q7Z494 1330 aa27.61■■■□□ 2.01
TMEM53-201ENST00000372235 LRP6O75581 1613 aa27.6■■■□□ 2.01
TMEM53-201ENST00000372235 CFAP70Q5T0N1 1121 aa27.6■■■□□ 2.01
TMEM53-201ENST00000372235 ESCO1Q5FWF5 840 aa27.59■■■□□ 2.01
TMEM53-201ENST00000372235 NUTM2BA6NNL0 878 aaPredicted RBP27.58■■■□□ 2.01
TMEM53-201ENST00000372235 NUTM2EB1AL46 878 aaPredicted RBP27.58■■■□□ 2.01
TMEM53-201ENST00000372235 NUTM2AQ8IVF1 878 aaPredicted RBP27.58■■■□□ 2.01
TMEM53-201ENST00000372235 PNPLA6Q8IY17 1366 aa27.58■■■□□ 2.01
TMEM53-201ENST00000372235 DCAF11Q8TEB1 546 aa27.56■■■□□ 2
TMEM53-201ENST00000372235 DDX17Q92841 729 aaKnown RBP27.56■■■□□ 2
TMEM53-201ENST00000372235 DLC1Q96QB1 1528 aa27.52■■■□□ 2
TMEM53-201ENST00000372235 PLEKHH1Q9ULM0 1364 aa27.52■■■□□ 2
TMEM53-201ENST00000372235 POGKQ9P215 609 aa27.51■■□□□ 1.99
TMEM53-201ENST00000372235 KDM2AQ9Y2K7 1162 aa27.51■■□□□ 1.99
TMEM53-201ENST00000372235 PRAM1Q96QH2 718 aa27.49■■□□□ 1.99
TMEM53-201ENST00000372235 FOXO3O43524 673 aa27.47■■□□□ 1.99
TMEM53-201ENST00000372235 FMN2Q9NZ56 1722 aa27.47■■□□□ 1.99
TMEM53-201ENST00000372235 RXRBP28702 533 aa27.46■■□□□ 1.99
TMEM53-201ENST00000372235 KIF1AQ12756 1690 aa27.46■■□□□ 1.99
TMEM53-201ENST00000372235 AFF2P51816 1311 aa27.45■■□□□ 1.99
TMEM53-201ENST00000372235 NUTM2FA1L443 756 aa27.45■■□□□ 1.98
TMEM53-201ENST00000372235 C8orf37Q96NL8 207 aa27.45■■□□□ 1.98
TMEM53-201ENST00000372235 ADGRB1O14514 1584 aa27.44■■□□□ 1.98
TMEM53-201ENST00000372235 EIF3AQ14152 1382 aaKnown RBP27.44■■□□□ 1.98
TMEM53-201ENST00000372235 PXDNQ92626 1479 aa27.43■■□□□ 1.98
TMEM53-201ENST00000372235 PSME1Q06323 249 aa27.42■■□□□ 1.98
TMEM53-201ENST00000372235 NGLY1Q96IV0 654 aa27.42■■□□□ 1.98
TMEM53-201ENST00000372235 COL22A1Q8NFW1 1626 aaPredicted RBP27.41■■□□□ 1.98
TMEM53-201ENST00000372235 TRAK1Q9UPV9 953 aa27.41■■□□□ 1.98
TMEM53-201ENST00000372235 PHF8Q9UPP1 1060 aa27.4■■□□□ 1.98
TMEM53-201ENST00000372235 ANKARQ7Z5J8 1434 aa27.4■■□□□ 1.98
TMEM53-201ENST00000372235 CDK12Q9NYV4 1490 aaPredicted RBP27.39■■□□□ 1.98
TMEM53-201ENST00000372235 ADAMTS2O95450 1211 aa27.39■■□□□ 1.98
TMEM53-201ENST00000372235 SAFB2Q14151 953 aaKnown RBP eCLIP27.39■■□□□ 1.98
TMEM53-201ENST00000372235 ADGRB2O60241 1585 aa27.37■■□□□ 1.97
TMEM53-201ENST00000372235 QTRT2Q9H974 415 aaKnown RBP27.36■■□□□ 1.97
TMEM53-201ENST00000372235 RBM6P78332 1123 aaKnown RBP27.35■■□□□ 1.97
TMEM53-201ENST00000372235 KRT28Q7Z3Y7 464 aa27.35■■□□□ 1.97
TMEM53-201ENST00000372235 XPCQ01831 940 aaPredicted RBP27.34■■□□□ 1.97
TMEM53-201ENST00000372235 SPATA31A3Q5VYP0 1347 aa27.34■■□□□ 1.97
TMEM53-201ENST00000372235 FNBP4Q8N3X1 1017 aaPredicted RBP27.32■■□□□ 1.96
TMEM53-201ENST00000372235 USP21Q9UK80 565 aa27.32■■□□□ 1.96
TMEM53-201ENST00000372235 TRPC5Q9UL62 973 aaPredicted RBP27.31■■□□□ 1.96
TMEM53-201ENST00000372235 WASLO00401 505 aaPredicted RBP27.3■■□□□ 1.96
TMEM53-201ENST00000372235 SBNO1A3KN83 1393 aa27.3■■□□□ 1.96
TMEM53-201ENST00000372235 KIAA1210Q9ULL0 1709 aa27.3■■□□□ 1.96
TMEM53-201ENST00000372235 MINK1Q8N4C8 1332 aaPredicted RBP27.29■■□□□ 1.96
TMEM53-201ENST00000372235 ARHGEF10O15013 1369 aa27.28■■□□□ 1.96
TMEM53-201ENST00000372235 TNS3Q68CZ2 1445 aa27.27■■□□□ 1.96
TMEM53-201ENST00000372235 HIRIP3Q9BW71 556 aaPredicted RBP27.27■■□□□ 1.96
TMEM53-201ENST00000372235 TULP4Q9NRJ4 1543 aa27.26■■□□□ 1.96
TMEM53-201ENST00000372235 GPRASP1Q5JY77 1395 aa27.26■■□□□ 1.95
TMEM53-201ENST00000372235 RGPD8O14715 1765 aaPredicted RBP27.25■■□□□ 1.95
TMEM53-201ENST00000372235 HAP1P54257 671 aaPredicted RBP27.25■■□□□ 1.95
TMEM53-201ENST00000372235 ARHGEF28Q8N1W1 1705 aaKnown RBP27.22■■□□□ 1.95
TMEM53-201ENST00000372235 PMFBP1Q8TBY8 1022 aa27.22■■□□□ 1.95
TMEM53-201ENST00000372235 MARF1Q9Y4F3 1742 aaKnown RBP27.21■■□□□ 1.95
TMEM53-201ENST00000372235 USP32Q8NFA0 1604 aa27.21■■□□□ 1.95
TMEM53-201ENST00000372235 LMOD2Q6P5Q4 547 aa27.19■■□□□ 1.94
TMEM53-201ENST00000372235 ATRNO75882 1429 aa27.18■■□□□ 1.94
TMEM53-201ENST00000372235 NGDNQ8NEJ9 315 aaKnown RBP27.18■■□□□ 1.94
TMEM53-201ENST00000372235 UPF1Q92900 1129 aaKnown RBP eCLIP27.16■■□□□ 1.94
TMEM53-201ENST00000372235 RGS12O14924 1447 aa27.16■■□□□ 1.94
TMEM53-201ENST00000372235 PRR36Q9H6K5 1346 aa27.16■■□□□ 1.94
TMEM53-201ENST00000372235 BCL9LQ86UU0 1499 aa27.15■■□□□ 1.94
TMEM53-201ENST00000372235 UNC5CLQ8IV45 518 aa27.15■■□□□ 1.94
TMEM53-201ENST00000372235 L3MBTL2Q969R5 705 aa27.15■■□□□ 1.94
TMEM53-201ENST00000372235 NUDT16Q96DE0 195 aaKnown RBP27.15■■□□□ 1.94
TMEM53-201ENST00000372235 ITSN1Q15811 1721 aa27.15■■□□□ 1.94
TMEM53-201ENST00000372235 NBPF1Q3BBV0 1214 aa27.13■■□□□ 1.93
TMEM53-201ENST00000372235 CDK19Q9BWU1 502 aa27.13■■□□□ 1.93
TMEM53-201ENST00000372235 GJD4Q96KN9 370 aaPredicted RBP27.12■■□□□ 1.93
TMEM53-201ENST00000372235 CCDC61Q9Y6R9 512 aa27.12■■□□□ 1.93
TMEM53-201ENST00000372235 SLIT2O94813 1529 aa27.11■■□□□ 1.93
TMEM53-201ENST00000372235 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.11■■□□□ 1.93
TMEM53-201ENST00000372235 CENPJQ9HC77 1338 aaPredicted RBP27.11■■□□□ 1.93
TMEM53-201ENST00000372235 ATP7BP35670 1465 aa27.1■■□□□ 1.93
TMEM53-201ENST00000372235 ATAD2Q6PL18 1390 aa27.09■■□□□ 1.93
TMEM53-201ENST00000372235 NEUROD1Q13562 356 aa27.08■■□□□ 1.93
TMEM53-201ENST00000372235 SIN3AQ96ST3 1273 aa27.08■■□□□ 1.93
TMEM53-201ENST00000372235 TRPM3Q9HCF6 1732 aaPredicted RBP27.07■■□□□ 1.92
TMEM53-201ENST00000372235 PAK3O75914 559 aaPredicted RBP27.07■■□□□ 1.92
TMEM53-201ENST00000372235 CABLES1Q8TDN4 633 aa27.07■■□□□ 1.92
TMEM53-201ENST00000372235 PLEKHG3A1L390 1219 aa27.05■■□□□ 1.92
TMEM53-201ENST00000372235 SRPK2P78362 688 aaKnown RBP27.04■■□□□ 1.92
TMEM53-201ENST00000372235 POLR3AO14802 1390 aaPredicted RBP27.04■■□□□ 1.92
TMEM53-201ENST00000372235 ALS2Q96Q42 1657 aa27.04■■□□□ 1.92
TMEM53-201ENST00000372235 VPS72Q15906 364 aa27.03■■□□□ 1.92
TMEM53-201ENST00000372235 NWD2Q9ULI1 1742 aa27.03■■□□□ 1.92
TMEM53-201ENST00000372235 TRIM26Q12899 539 aaPredicted RBP27.02■■□□□ 1.92
TMEM53-201ENST00000372235 ROCK2O75116 1388 aaKnown RBP27.01■■□□□ 1.91
TMEM53-201ENST00000372235 ABCA3Q99758 1704 aa27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms