RNA–Protein interactions for RNA: ENST00000371649.5

EDF1-203, Transcript of endothelial differentiation related factor 1, humanhuman

TSL 2 BASIC

Gene EDF1, Length 790 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDF1-203ENST00000371649 PPARGC1BQ86YN6 1023 aaKnown RBP23.72■■□□□ 1.39
EDF1-203ENST00000371649 COL22A1Q8NFW1 1626 aaPredicted RBP23.7■■□□□ 1.39
EDF1-203ENST00000371649 LRPPRCP42704 1394 aaKnown RBP23.7■■□□□ 1.38
EDF1-203ENST00000371649 RPGRIP1LQ68CZ1 1315 aa23.7■■□□□ 1.38
EDF1-203ENST00000371649 FOXO3O43524 673 aa23.68■■□□□ 1.38
EDF1-203ENST00000371649 HAP1P54257 671 aaPredicted RBP23.68■■□□□ 1.38
EDF1-203ENST00000371649 XPCQ01831 940 aaPredicted RBP23.68■■□□□ 1.38
EDF1-203ENST00000371649 SF3B2Q13435 895 aaKnown RBP23.68■■□□□ 1.38
EDF1-203ENST00000371649 GJD4Q96KN9 370 aaPredicted RBP23.68■■□□□ 1.38
EDF1-203ENST00000371649 MARF1Q9Y4F3 1742 aaKnown RBP23.67■■□□□ 1.38
EDF1-203ENST00000371649 NUTM2FA1L443 756 aa23.66■■□□□ 1.38
EDF1-203ENST00000371649 SRCAPQ6ZRS2 3230 aa23.66■■□□□ 1.38
EDF1-203ENST00000371649 MYOM2P54296 1465 aa23.63■■□□□ 1.37
EDF1-203ENST00000371649 STK26Q9P289 416 aa23.63■■□□□ 1.37
EDF1-203ENST00000371649 CDC42BPGQ6DT37 1551 aa23.62■■□□□ 1.37
EDF1-203ENST00000371649 SLC4A1APQ9BWU0 796 aaKnown RBP23.62■■□□□ 1.37
EDF1-203ENST00000371649 BCL9LQ86UU0 1499 aa23.62■■□□□ 1.37
EDF1-203ENST00000371649 PPLO60437 1756 aa23.6■■□□□ 1.37
EDF1-203ENST00000371649 UNC5CLQ8IV45 518 aa23.6■■□□□ 1.37
EDF1-203ENST00000371649 PRAG1Q86YV5 1406 aa23.59■■□□□ 1.37
EDF1-203ENST00000371649 CCDC9Q9Y3X0 531 aaKnown RBP23.59■■□□□ 1.37
EDF1-203ENST00000371649 PXDNQ92626 1479 aa23.59■■□□□ 1.37
EDF1-203ENST00000371649 BLMP54132 1417 aaPredicted RBP23.59■■□□□ 1.37
EDF1-203ENST00000371649 NAIPQ13075 1403 aa23.58■■□□□ 1.36
EDF1-203ENST00000371649 PLEKHG5O94827 1062 aa23.57■■□□□ 1.36
EDF1-203ENST00000371649 EP400Q96L91 3159 aa23.57■■□□□ 1.36
EDF1-203ENST00000371649 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.56■■□□□ 1.36
EDF1-203ENST00000371649 A0A0G2JS52 829 aa23.55■■□□□ 1.36
EDF1-203ENST00000371649 MYT1Q01538 1121 aa23.55■■□□□ 1.36
EDF1-203ENST00000371649 WAPLQ7Z5K2 1190 aa23.55■■□□□ 1.36
EDF1-203ENST00000371649 RGL3Q3MIN7 710 aa23.54■■□□□ 1.36
EDF1-203ENST00000371649 RALGAPBQ86X10 1494 aa23.54■■□□□ 1.36
EDF1-203ENST00000371649 LMOD2Q6P5Q4 547 aa23.53■■□□□ 1.36
EDF1-203ENST00000371649 KRT28Q7Z3Y7 464 aa23.53■■□□□ 1.36
EDF1-203ENST00000371649 PSME1Q06323 249 aa23.52■■□□□ 1.36
EDF1-203ENST00000371649 DEFB132Q7Z7B7 95 aa23.52■■□□□ 1.36
EDF1-203ENST00000371649 SPATA31A3Q5VYP0 1347 aa23.52■■□□□ 1.36
EDF1-203ENST00000371649 CCDC144AA2RUR9 1427 aa23.51■■□□□ 1.35
EDF1-203ENST00000371649 KIF1AQ12756 1690 aa23.51■■□□□ 1.35
EDF1-203ENST00000371649 SEPT12Q8IYM1 358 aa23.5■■□□□ 1.35
EDF1-203ENST00000371649 RRBP1Q9P2E9 1410 aaKnown RBP23.5■■□□□ 1.35
EDF1-203ENST00000371649 GLI3P10071 1580 aa23.49■■□□□ 1.35
EDF1-203ENST00000371649 BRWD3Q6RI45 1802 aa23.49■■□□□ 1.35
EDF1-203ENST00000371649 SLIT2O94813 1529 aa23.49■■□□□ 1.35
EDF1-203ENST00000371649 ADGRF5Q8IZF2 1346 aa23.48■■□□□ 1.35
EDF1-203ENST00000371649 USP32Q8NFA0 1604 aa23.48■■□□□ 1.35
EDF1-203ENST00000371649 TMEM132EQ6IEE7 984 aa23.47■■□□□ 1.35
EDF1-203ENST00000371649 KRT27Q7Z3Y8 459 aa23.46■■□□□ 1.35
EDF1-203ENST00000371649 ANKRD30BQ9BXX2 1392 aa23.46■■□□□ 1.35
EDF1-203ENST00000371649 FMN2Q9NZ56 1722 aa23.45■■□□□ 1.34
EDF1-203ENST00000371649 VPS72Q15906 364 aa23.45■■□□□ 1.34
EDF1-203ENST00000371649 TECPR2O15040 1411 aa23.44■■□□□ 1.34
EDF1-203ENST00000371649 ABCC11Q96J66 1382 aa23.44■■□□□ 1.34
EDF1-203ENST00000371649 BAG6P46379 1132 aa23.44■■□□□ 1.34
EDF1-203ENST00000371649 CABLES1Q8TDN4 633 aa23.44■■□□□ 1.34
EDF1-203ENST00000371649 PHF8Q9UPP1 1060 aa23.44■■□□□ 1.34
EDF1-203ENST00000371649 KNDC1Q76NI1 1749 aa23.43■■□□□ 1.34
EDF1-203ENST00000371649 TNS3Q68CZ2 1445 aa23.42■■□□□ 1.34
EDF1-203ENST00000371649 PLEKHH1Q9ULM0 1364 aa23.42■■□□□ 1.34
EDF1-203ENST00000371649 PLCH1Q4KWH8 1693 aa23.41■■□□□ 1.34
EDF1-203ENST00000371649 NWD2Q9ULI1 1742 aa23.4■■□□□ 1.34
EDF1-203ENST00000371649 ARHGEF10O15013 1369 aa23.4■■□□□ 1.34
EDF1-203ENST00000371649 IFT172Q9UG01 1749 aa23.39■■□□□ 1.34
EDF1-203ENST00000371649 YTHDC2Q9H6S0 1430 aaKnown RBP23.39■■□□□ 1.33
EDF1-203ENST00000371649 RGPD8O14715 1765 aaPredicted RBP23.39■■□□□ 1.33
EDF1-203ENST00000371649 PSDA5PKW4 1024 aaPredicted RBP23.38■■□□□ 1.33
EDF1-203ENST00000371649 SAFB2Q14151 953 aaKnown RBP eCLIP23.36■■□□□ 1.33
EDF1-203ENST00000371649 LRP5O75197 1615 aa23.36■■□□□ 1.33
EDF1-203ENST00000371649 DHX57Q6P158 1386 aaKnown RBP23.36■■□□□ 1.33
EDF1-203ENST00000371649 POGKQ9P215 609 aa23.35■■□□□ 1.33
EDF1-203ENST00000371649 ONECUT3O60422 494 aaPredicted RBP23.34■■□□□ 1.33
EDF1-203ENST00000371649 FAM98CQ17RN3 349 aaKnown RBP23.34■■□□□ 1.33
EDF1-203ENST00000371649 SBNO1A3KN83 1393 aa23.34■■□□□ 1.33
EDF1-203ENST00000371649 PMFBP1Q8TBY8 1022 aa23.33■■□□□ 1.33
EDF1-203ENST00000371649 SIRT1Q96EB6 747 aa23.33■■□□□ 1.33
EDF1-203ENST00000371649 PIK3C2GO75747 1445 aa23.33■■□□□ 1.32
EDF1-203ENST00000371649 BTG4Q9NY30 223 aa23.32■■□□□ 1.32
EDF1-203ENST00000371649 FAM83GA6ND36 823 aa23.31■■□□□ 1.32
EDF1-203ENST00000371649 SPATA31E1Q6ZUB1 1445 aa23.31■■□□□ 1.32
EDF1-203ENST00000371649 PRAM1Q96QH2 718 aa23.3■■□□□ 1.32
EDF1-203ENST00000371649 ABCA3Q99758 1704 aa23.3■■□□□ 1.32
EDF1-203ENST00000371649 NRXN1Q9ULB1 1477 aa23.3■■□□□ 1.32
EDF1-203ENST00000371649 HRCP23327 699 aa23.29■■□□□ 1.32
EDF1-203ENST00000371649 MPHOSPH9Q99550 1183 aa23.29■■□□□ 1.32
EDF1-203ENST00000371649 GPRASP1Q5JY77 1395 aa23.28■■□□□ 1.32
EDF1-203ENST00000371649 EN1Q05925 392 aaPredicted RBP23.27■■□□□ 1.32
EDF1-203ENST00000371649 C14orf93Q9H972 538 aaKnown RBP23.27■■□□□ 1.32
EDF1-203ENST00000371649 RGPD1P0DJD0 1748 aa23.27■■□□□ 1.32
EDF1-203ENST00000371649 CFAP70Q5T0N1 1121 aa23.26■■□□□ 1.31
EDF1-203ENST00000371649 PAK3O75914 559 aaPredicted RBP23.24■■□□□ 1.31
EDF1-203ENST00000371649 R3HDM1Q15032 1099 aaKnown RBP23.24■■□□□ 1.31
EDF1-203ENST00000371649 COL14A1Q05707 1796 aaKnown RBP23.24■■□□□ 1.31
EDF1-203ENST00000371649 FAM182BQ5T319 152 aa23.23■■□□□ 1.31
EDF1-203ENST00000371649 ANKARQ7Z5J8 1434 aa23.23■■□□□ 1.31
EDF1-203ENST00000371649 EIF3AQ14152 1382 aaKnown RBP23.22■■□□□ 1.31
EDF1-203ENST00000371649 NGDNQ8NEJ9 315 aaKnown RBP23.21■■□□□ 1.31
EDF1-203ENST00000371649 NRAPQ86VF7 1730 aa23.21■■□□□ 1.31
EDF1-203ENST00000371649 HIRIP3Q9BW71 556 aaPredicted RBP23.2■■□□□ 1.3
EDF1-203ENST00000371649 PRDM11Q9NQV5 511 aa23.2■■□□□ 1.3
EDF1-203ENST00000371649 SPATA31A5Q5VU36 1347 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms