RNA–Protein interactions for RNA: ENST00000371509.8

SCP2-201, Transcript of sterol carrier protein 2, humanhuman

TSL 1 (best) BASIC

Gene SCP2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCP2-201ENST00000371509 RBM33Q96EV2 1170 aaKnown RBP22.97■■□□□ 1.27
SCP2-201ENST00000371509 PTCH1Q13635 1447 aa22.96■■□□□ 1.27
SCP2-201ENST00000371509 FAM135BQ49AJ0 1406 aa22.96■■□□□ 1.27
SCP2-201ENST00000371509 KIF7Q2M1P5 1343 aa22.95■■□□□ 1.27
SCP2-201ENST00000371509 ZNF335Q9H4Z2 1342 aaPredicted RBP22.95■■□□□ 1.27
SCP2-201ENST00000371509 MINK1Q8N4C8 1332 aaPredicted RBP22.95■■□□□ 1.26
SCP2-201ENST00000371509 ANP32CO43423 234 aa22.94■■□□□ 1.26
SCP2-201ENST00000371509 SIRT1Q96EB6 747 aa22.94■■□□□ 1.26
SCP2-201ENST00000371509 CCER2I3L3R5 266 aa22.93■■□□□ 1.26
SCP2-201ENST00000371509 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.92■■□□□ 1.26
SCP2-201ENST00000371509 DISP3Q9P2K9 1392 aa22.91■■□□□ 1.26
SCP2-201ENST00000371509 NKTRP30414 1462 aaKnown RBP22.89■■□□□ 1.25
SCP2-201ENST00000371509 PROSER2Q86WR7 435 aaPredicted RBP22.89■■□□□ 1.25
SCP2-201ENST00000371509 POLR3GLQ9BT43 218 aa22.89■■□□□ 1.25
SCP2-201ENST00000371509 SBNO2Q9Y2G9 1366 aa22.89■■□□□ 1.25
SCP2-201ENST00000371509 TMF1P82094 1093 aa22.88■■□□□ 1.25
SCP2-201ENST00000371509 TULP4Q9NRJ4 1543 aa22.87■■□□□ 1.25
SCP2-201ENST00000371509 NALCNQ8IZF0 1738 aa22.86■■□□□ 1.25
SCP2-201ENST00000371509 SCAF1Q9H7N4 1312 aaKnown RBP22.84■■□□□ 1.25
SCP2-201ENST00000371509 EVC2Q86UK5 1308 aa22.83■■□□□ 1.25
SCP2-201ENST00000371509 C14orf37Q86TY3 774 aa22.83■■□□□ 1.24
SCP2-201ENST00000371509 TMEM94Q12767 1356 aa22.83■■□□□ 1.24
SCP2-201ENST00000371509 XIRP1Q702N8 1843 aaKnown RBP22.82■■□□□ 1.24
SCP2-201ENST00000371509 CABP2Q9NPB3 220 aa22.81■■□□□ 1.24
SCP2-201ENST00000371509 ADGRB2O60241 1585 aa22.81■■□□□ 1.24
SCP2-201ENST00000371509 LRRC7Q96NW7 1537 aa22.81■■□□□ 1.24
SCP2-201ENST00000371509 CDK19Q9BWU1 502 aa22.81■■□□□ 1.24
SCP2-201ENST00000371509 SRPK2P78362 688 aaKnown RBP22.8■■□□□ 1.24
SCP2-201ENST00000371509 WASLO00401 505 aaPredicted RBP22.79■■□□□ 1.24
SCP2-201ENST00000371509 SLC24A1O60721 1099 aa22.79■■□□□ 1.24
SCP2-201ENST00000371509 ADGRL3Q9HAR2 1447 aa22.79■■□□□ 1.24
SCP2-201ENST00000371509 NUTM2FA1L443 756 aa22.78■■□□□ 1.24
SCP2-201ENST00000371509 LTBP4Q8N2S1 1624 aa22.77■■□□□ 1.24
SCP2-201ENST00000371509 CDCA8Q53HL2 280 aa22.76■■□□□ 1.23
SCP2-201ENST00000371509 CDC42BPGQ6DT37 1551 aa22.74■■□□□ 1.23
SCP2-201ENST00000371509 MYOM1P52179 1685 aa22.73■■□□□ 1.23
SCP2-201ENST00000371509 FMN2Q9NZ56 1722 aa22.73■■□□□ 1.23
SCP2-201ENST00000371509 RGPD8O14715 1765 aaPredicted RBP22.73■■□□□ 1.23
SCP2-201ENST00000371509 C19orf44Q9H6X5 657 aa22.72■■□□□ 1.23
SCP2-201ENST00000371509 USP32Q8NFA0 1604 aa22.71■■□□□ 1.23
SCP2-201ENST00000371509 NCOA3Q9Y6Q9 1424 aa22.71■■□□□ 1.23
SCP2-201ENST00000371509 PRR36Q9H6K5 1346 aa22.71■■□□□ 1.23
SCP2-201ENST00000371509 TMC1Q8TDI8 760 aa22.71■■□□□ 1.23
SCP2-201ENST00000371509 PRKRIP1Q9H875 184 aaPredicted RBP22.71■■□□□ 1.23
SCP2-201ENST00000371509 NUDT16Q96DE0 195 aaKnown RBP22.7■■□□□ 1.22
SCP2-201ENST00000371509 ATP7BP35670 1465 aa22.69■■□□□ 1.22
SCP2-201ENST00000371509 MSH6P52701 1360 aa22.69■■□□□ 1.22
SCP2-201ENST00000371509 ATAD2Q6PL18 1390 aa22.69■■□□□ 1.22
SCP2-201ENST00000371509 SLC12A5Q9H2X9 1139 aa22.68■■□□□ 1.22
SCP2-201ENST00000371509 PUS7Q96PZ0 661 aaKnown RBP22.68■■□□□ 1.22
SCP2-201ENST00000371509 ATF3P18847 181 aa22.66■■□□□ 1.22
SCP2-201ENST00000371509 CABP1Q9NZU7 370 aa22.65■■□□□ 1.22
SCP2-201ENST00000371509 TOPAZ1Q8N9V7 1692 aa22.65■■□□□ 1.22
SCP2-201ENST00000371509 PPIP5K1Q6PFW1 1433 aa22.65■■□□□ 1.22
SCP2-201ENST00000371509 GTF3C3Q9Y5Q9 886 aa22.64■■□□□ 1.22
SCP2-201ENST00000371509 CCDC61Q9Y6R9 512 aa22.64■■□□□ 1.22
SCP2-201ENST00000371509 DCCP43146 1447 aa22.63■■□□□ 1.21
SCP2-201ENST00000371509 ITSN1Q15811 1721 aa22.63■■□□□ 1.21
SCP2-201ENST00000371509 CADPS2Q86UW7 1296 aa22.62■■□□□ 1.21
SCP2-201ENST00000371509 PANK3Q9H999 370 aa22.62■■□□□ 1.21
SCP2-201ENST00000371509 ANKARQ7Z5J8 1434 aa22.62■■□□□ 1.21
SCP2-201ENST00000371509 MST1RQ04912 1400 aa22.61■■□□□ 1.21
SCP2-201ENST00000371509 PMFBP1Q8TBY8 1022 aa22.6■■□□□ 1.21
SCP2-201ENST00000371509 ESCO1Q5FWF5 840 aa22.59■■□□□ 1.21
SCP2-201ENST00000371509 C1orf167Q5SNV9 1468 aa22.59■■□□□ 1.21
SCP2-201ENST00000371509 CD163L1Q9NR16 1453 aa22.59■■□□□ 1.21
SCP2-201ENST00000371509 ORAI2Q96SN7 254 aa22.58■■□□□ 1.21
SCP2-201ENST00000371509 NINLQ9Y2I6 1382 aa22.58■■□□□ 1.21
SCP2-201ENST00000371509 A0A1W2PP64 1363 aa22.57■■□□□ 1.2
SCP2-201ENST00000371509 ANKRD36BQ8N2N9 1353 aa22.56■■□□□ 1.2
SCP2-201ENST00000371509 CCDC184Q52MB2 194 aa22.55■■□□□ 1.2
SCP2-201ENST00000371509 CARD14Q9BXL6 1004 aa22.55■■□□□ 1.2
SCP2-201ENST00000371509 ACEP12821 1306 aa22.55■■□□□ 1.2
SCP2-201ENST00000371509 PLEKHG3A1L390 1219 aa22.54■■□□□ 1.2
SCP2-201ENST00000371509 KTN1Q86UP2 1357 aaKnown RBP22.54■■□□□ 1.2
SCP2-201ENST00000371509 PHF8Q9UPP1 1060 aa22.54■■□□□ 1.2
SCP2-201ENST00000371509 AKAP12Q02952 1782 aa22.54■■□□□ 1.2
SCP2-201ENST00000371509 TERF2IPQ9NYB0 399 aa22.54■■□□□ 1.2
SCP2-201ENST00000371509 SLAIN2Q9P270 581 aa22.54■■□□□ 1.2
SCP2-201ENST00000371509 CNGB1Q14028 1251 aaPredicted RBP22.53■■□□□ 1.2
SCP2-201ENST00000371509 HDGFL2Q7Z4V5 671 aaPredicted RBP22.52■■□□□ 1.2
SCP2-201ENST00000371509 NGDNQ8NEJ9 315 aaKnown RBP22.52■■□□□ 1.2
SCP2-201ENST00000371509 CPSF1Q10570 1443 aaKnown RBP22.52■■□□□ 1.2
SCP2-201ENST00000371509 PER1O15534 1290 aaPredicted RBP22.51■■□□□ 1.19
SCP2-201ENST00000371509 NSD3Q9BZ95 1437 aa22.51■■□□□ 1.19
SCP2-201ENST00000371509 MON2Q7Z3U7 1717 aa22.5■■□□□ 1.19
SCP2-201ENST00000371509 POLR3AO14802 1390 aaPredicted RBP22.5■■□□□ 1.19
SCP2-201ENST00000371509 CERKQ8TCT0 537 aa22.49■■□□□ 1.19
SCP2-201ENST00000371509 FOXO3O43524 673 aa22.49■■□□□ 1.19
SCP2-201ENST00000371509 MRS2Q9HD23 443 aa22.49■■□□□ 1.19
SCP2-201ENST00000371509 KIF1AQ12756 1690 aa22.49■■□□□ 1.19
SCP2-201ENST00000371509 DDX17Q92841 729 aaKnown RBP22.48■■□□□ 1.19
SCP2-201ENST00000371509 BRINP3Q76B58 766 aa22.47■■□□□ 1.19
SCP2-201ENST00000371509 KNSTRNQ9Y448 316 aa22.47■■□□□ 1.19
SCP2-201ENST00000371509 XPCQ01831 940 aaPredicted RBP22.46■■□□□ 1.19
SCP2-201ENST00000371509 ZNF692Q9BU19 519 aaPredicted RBP22.46■■□□□ 1.19
SCP2-201ENST00000371509 USP6P35125 1406 aa22.46■■□□□ 1.19
SCP2-201ENST00000371509 PARD3Q8TEW0 1356 aa22.45■■□□□ 1.19
SCP2-201ENST00000371509 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.45■■□□□ 1.193e-6■■■□□ 15
SCP2-201ENST00000371509 NRKQ7Z2Y5 1582 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms