RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 COG6Q9Y2V7 657 aa15.31■□□□□ 0.04
PDE6C-201ENST00000371447 NCKAP5LQ9HCH0 1330 aa15.31■□□□□ 0.04
PDE6C-201ENST00000371447 TXNDC2Q86VQ3 553 aa15.3■□□□□ 0.04
PDE6C-201ENST00000371447 CDK19Q9BWU1 502 aa15.3■□□□□ 0.04
PDE6C-201ENST00000371447 RPGRIP1LQ68CZ1 1315 aa15.3■□□□□ 0.04
PDE6C-201ENST00000371447 ABCC3O15438 1527 aa15.3■□□□□ 0.04
PDE6C-201ENST00000371447 KIF1BO60333 1816 aa15.3■□□□□ 0.04
PDE6C-201ENST00000371447 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.3■□□□□ 0.04
PDE6C-201ENST00000371447 TNNQ9UQP3 1299 aa15.3■□□□□ 0.04
PDE6C-201ENST00000371447 LAS1LQ9Y4W2 734 aaKnown RBP15.3■□□□□ 0.04
PDE6C-201ENST00000371447 PIK3C2GO75747 1445 aa15.3■□□□□ 0.04
PDE6C-201ENST00000371447 HECW2Q9P2P5 1572 aa15.29■□□□□ 0.04
PDE6C-201ENST00000371447 PDE4AP27815 886 aa15.29■□□□□ 0.04
PDE6C-201ENST00000371447 IQGAP1P46940 1657 aa15.29■□□□□ 0.04
PDE6C-201ENST00000371447 TSR2Q969E8 191 aaKnown RBP15.29■□□□□ 0.04
PDE6C-201ENST00000371447 TSPOAP1O95153 1857 aa15.28■□□□□ 0.04
PDE6C-201ENST00000371447 LAMC1P11047 1609 aa15.28■□□□□ 0.04
PDE6C-201ENST00000371447 MYOM2P54296 1465 aa15.28■□□□□ 0.04
PDE6C-201ENST00000371447 E9PSI1 815 aa15.27■□□□□ 0.04
PDE6C-201ENST00000371447 CEBPAP49715 358 aaPredicted RBP15.27■□□□□ 0.04
PDE6C-201ENST00000371447 RUNDC1Q96C34 613 aa15.27■□□□□ 0.03
PDE6C-201ENST00000371447 NOP58Q9Y2X3 529 aaKnown RBP15.27■□□□□ 0.03
PDE6C-201ENST00000371447 ZBTB47Q9UFB7 747 aaPredicted RBP15.26■□□□□ 0.03
PDE6C-201ENST00000371447 PLEKHG5O94827 1062 aa15.26■□□□□ 0.03
PDE6C-201ENST00000371447 SYNMO15061 1565 aa15.25■□□□□ 0.03
PDE6C-201ENST00000371447 ZNF521Q96K83 1311 aa15.25■□□□□ 0.03
PDE6C-201ENST00000371447 ZRANB1Q9UGI0 708 aa15.25■□□□□ 0.03
PDE6C-201ENST00000371447 HMOX1P09601 288 aa15.25■□□□□ 0.03
PDE6C-201ENST00000371447 TERF2IPQ9NYB0 399 aa15.25■□□□□ 0.03
PDE6C-201ENST00000371447 KDM5AP29375 1690 aaKnown RBP15.25■□□□□ 0.03
PDE6C-201ENST00000371447 ZMYM4Q5VZL5 1548 aa15.24■□□□□ 0.03
PDE6C-201ENST00000371447 SLC4A3P48751 1232 aa15.24■□□□□ 0.03
PDE6C-201ENST00000371447 FYB1O15117 783 aa15.24■□□□□ 0.03
PDE6C-201ENST00000371447 HDGFL2Q7Z4V5 671 aaPredicted RBP15.24■□□□□ 0.03
PDE6C-201ENST00000371447 ADGRB3O60242 1522 aa15.24■□□□□ 0.03
PDE6C-201ENST00000371447 NEO1Q92859 1461 aa15.24■□□□□ 0.03
PDE6C-201ENST00000371447 A0A1W2PP64 1363 aa15.23■□□□□ 0.03
PDE6C-201ENST00000371447 TCERG1O14776 1098 aaKnown RBP15.23■□□□□ 0.03
PDE6C-201ENST00000371447 MAPK8IP3Q9UPT6 1336 aa15.22■□□□□ 0.03
PDE6C-201ENST00000371447 ELL2O00472 640 aaPredicted RBP15.21■□□□□ 0.03
PDE6C-201ENST00000371447 DIP2CQ9Y2E4 1556 aa15.2■□□□□ 0.02
PDE6C-201ENST00000371447 SLC26A8Q96RN1 970 aa15.2■□□□□ 0.02
PDE6C-201ENST00000371447 THUMPD2Q9BTF0 503 aaKnown RBP15.2■□□□□ 0.02
PDE6C-201ENST00000371447 IPO9Q96P70 1041 aaKnown RBP15.2■□□□□ 0.02
PDE6C-201ENST00000371447 NPC1L1Q9UHC9 1359 aa15.19■□□□□ 0.02
PDE6C-201ENST00000371447 LMTK2Q8IWU2 1503 aa15.19■□□□□ 0.02
PDE6C-201ENST00000371447 EIF5BO60841 1220 aaKnown RBP15.19■□□□□ 0.02
PDE6C-201ENST00000371447 IGHDP01880 384 aa15.19■□□□□ 0.02
PDE6C-201ENST00000371447 NME9Q86XW9 330 aa15.19■□□□□ 0.02
PDE6C-201ENST00000371447 RIPK4P57078 832 aa15.18■□□□□ 0.02
PDE6C-201ENST00000371447 RRS1Q15050 365 aaKnown RBP15.18■□□□□ 0.02
PDE6C-201ENST00000371447 MYOM1P52179 1685 aa15.18■□□□□ 0.02
PDE6C-201ENST00000371447 ANKRD36BQ8N2N9 1353 aa15.18■□□□□ 0.02
PDE6C-201ENST00000371447 SIGLEC1Q9BZZ2 1709 aa15.18■□□□□ 0.02
PDE6C-201ENST00000371447 RLBP1P12271 317 aa15.17■□□□□ 0.02
PDE6C-201ENST00000371447 TRHP20396 242 aaPredicted RBP15.17■□□□□ 0.02
PDE6C-201ENST00000371447 BACH2Q9BYV9 841 aa15.17■□□□□ 0.02
PDE6C-201ENST00000371447 EMILIN1Q9Y6C2 1016 aa15.17■□□□□ 0.02
PDE6C-201ENST00000371447 ADGRB1O14514 1584 aa15.17■□□□□ 0.02
PDE6C-201ENST00000371447 POLR3AO14802 1390 aaPredicted RBP15.17■□□□□ 0.02
PDE6C-201ENST00000371447 SBNO2Q9Y2G9 1366 aa15.17■□□□□ 0.02
PDE6C-201ENST00000371447 NRXN1Q9ULB1 1477 aa15.17■□□□□ 0.02
PDE6C-201ENST00000371447 YTHDC2Q9H6S0 1430 aaKnown RBP15.17■□□□□ 0.02
PDE6C-201ENST00000371447 EXOSC9Q06265 439 aaKnown RBP15.17■□□□□ 0.02
PDE6C-201ENST00000371447 NKTRP30414 1462 aaKnown RBP15.16■□□□□ 0.02
PDE6C-201ENST00000371447 DIAPH1O60610 1272 aaKnown RBP15.16■□□□□ 0.02
PDE6C-201ENST00000371447 CAMSAP1Q5T5Y3 1602 aa15.15■□□□□ 0.02
PDE6C-201ENST00000371447 RARSP54136 660 aaKnown RBP15.15■□□□□ 0.02
PDE6C-201ENST00000371447 FTSJ3Q8IY81 847 aaKnown RBP15.15■□□□□ 0.02
PDE6C-201ENST00000371447 SMC4Q9NTJ3 1288 aa15.15■□□□□ 0.02
PDE6C-201ENST00000371447 CENPQQ7L2Z9 268 aaPredicted RBP15.15■□□□□ 0.02
PDE6C-201ENST00000371447 TRMT2AQ8IZ69 625 aaKnown RBP15.15■□□□□ 0.02
PDE6C-201ENST00000371447 CFAP74Q9C0B2 1584 aa15.15■□□□□ 0.02
PDE6C-201ENST00000371447 PRKAR2BP31323 418 aa15.14■□□□□ 0.01
PDE6C-201ENST00000371447 GLI2P10070 1586 aa15.14■□□□□ 0.01
PDE6C-201ENST00000371447 TULP4Q9NRJ4 1543 aa15.14■□□□□ 0.01
PDE6C-201ENST00000371447 NEFMP07197 916 aa15.14■□□□□ 0.01
PDE6C-201ENST00000371447 TMPOP42166 694 aaKnown RBP15.14■□□□□ 0.01
PDE6C-201ENST00000371447 RBM33Q96EV2 1170 aaKnown RBP15.14■□□□□ 0.01
PDE6C-201ENST00000371447 QRICH2Q9H0J4 1663 aa15.13■□□□□ 0.01
PDE6C-201ENST00000371447 NEXMIFQ5QGS0 1516 aa15.13■□□□□ 0.01
PDE6C-201ENST00000371447 DAXXQ9UER7 740 aaPredicted RBP15.13■□□□□ 0.01
PDE6C-201ENST00000371447 MYH16Q9H6N6 1097 aa15.12■□□□□ 0.01
PDE6C-201ENST00000371447 PMFBP1Q8TBY8 1022 aa15.11■□□□□ 0.01
PDE6C-201ENST00000371447 METP08581 1390 aa15.11■□□□□ 0.01
PDE6C-201ENST00000371447 ITPRIPQ8IWB1 547 aa15.11■□□□□ 0.01
PDE6C-201ENST00000371447 NUDT16Q96DE0 195 aaKnown RBP15.11■□□□□ 0.01
PDE6C-201ENST00000371447 PPLO60437 1756 aa15.11■□□□□ 0.01
PDE6C-201ENST00000371447 RIMS2Q9UQ26 1411 aa15.11■□□□□ 0.01
PDE6C-201ENST00000371447 ZMYM3Q14202 1370 aa15.1■□□□□ 0.01
PDE6C-201ENST00000371447 ATAD2Q6PL18 1390 aa15.1■□□□□ 0.01
PDE6C-201ENST00000371447 DCTN1Q14203 1278 aa15.1■□□□□ 0.01
PDE6C-201ENST00000371447 PHACTR3Q96KR7 559 aa15.1■□□□□ 0.01
PDE6C-201ENST00000371447 PIK3C2BO00750 1634 aa15.1■□□□□ 0.01
PDE6C-201ENST00000371447 ANO8Q9HCE9 1232 aaPredicted RBP15.1■□□□□ 0.01
PDE6C-201ENST00000371447 NUTM2GQ5VZR2 741 aa15.09■□□□□ 0.01
PDE6C-201ENST00000371447 POLKQ9UBT6 870 aa15.09■□□□□ 0.01
PDE6C-201ENST00000371447 PCDHB15Q9Y5E8 787 aa15.09■□□□□ 0.01
PDE6C-201ENST00000371447 KIAA1210Q9ULL0 1709 aa15.09■□□□□ 0.01
PDE6C-201ENST00000371447 RIMBP3CA6NJZ7 1639 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms