RNA–Protein interactions for RNA: ENST00000369763.4

LRIF1-201, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene LRIF1, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-201ENST00000369763 BECN1Q14457 450 aa13.9□□□□□ -0.18
LRIF1-201ENST00000369763 SYNMO15061 1565 aa13.9□□□□□ -0.18
LRIF1-201ENST00000369763 TRPM2O94759 1503 aa13.89□□□□□ -0.19
LRIF1-201ENST00000369763 MAPK8IP3Q9UPT6 1336 aa13.89□□□□□ -0.19
LRIF1-201ENST00000369763 LAMC1P11047 1609 aa13.89□□□□□ -0.19
LRIF1-201ENST00000369763 PTPRTO14522 1441 aa13.89□□□□□ -0.19
LRIF1-201ENST00000369763 MINK1Q8N4C8 1332 aaPredicted RBP13.89□□□□□ -0.19
LRIF1-201ENST00000369763 ELL2O00472 640 aaPredicted RBP13.88□□□□□ -0.19
LRIF1-201ENST00000369763 PMFBP1Q8TBY8 1022 aa13.88□□□□□ -0.19
LRIF1-201ENST00000369763 RNF17Q9BXT8 1623 aaKnown RBP13.88□□□□□ -0.19
LRIF1-201ENST00000369763 RAPGEF3O95398 923 aa13.88□□□□□ -0.19
LRIF1-201ENST00000369763 ADGRL1O94910 1474 aa13.88□□□□□ -0.19
LRIF1-201ENST00000369763 TBC1D2Q9BYX2 928 aa13.87□□□□□ -0.19
LRIF1-201ENST00000369763 RWDD1Q9H446 243 aaPredicted RBP13.87□□□□□ -0.19
LRIF1-201ENST00000369763 STAC3Q96MF2 364 aa13.87□□□□□ -0.19
LRIF1-201ENST00000369763 NPC1L1Q9UHC9 1359 aa13.87□□□□□ -0.19
LRIF1-201ENST00000369763 DZIP1LQ8IYY4 767 aaKnown RBP13.87□□□□□ -0.19
LRIF1-201ENST00000369763 ZCCHC11Q5TAX3 1644 aaKnown RBP13.86□□□□□ -0.19
LRIF1-201ENST00000369763 IQGAP1P46940 1657 aa13.86□□□□□ -0.19
LRIF1-201ENST00000369763 POLR3AO14802 1390 aaPredicted RBP13.86□□□□□ -0.19
LRIF1-201ENST00000369763 ZFYVE16Q7Z3T8 1539 aa13.86□□□□□ -0.19
LRIF1-201ENST00000369763 ZKSCAN2Q63HK3 967 aa13.86□□□□□ -0.19
LRIF1-201ENST00000369763 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.86□□□□□ -0.193e-7■■■■□ 23.6
LRIF1-201ENST00000369763 MYH16Q9H6N6 1097 aa13.86□□□□□ -0.19
LRIF1-201ENST00000369763 SSH1Q8WYL5 1049 aa13.85□□□□□ -0.19
LRIF1-201ENST00000369763 C14orf93Q9H972 538 aaKnown RBP13.85□□□□□ -0.19
LRIF1-201ENST00000369763 FOXD4L1Q9NU39 408 aa13.85□□□□□ -0.19
LRIF1-201ENST00000369763 TRIM27P14373 513 aa13.85□□□□□ -0.19
LRIF1-201ENST00000369763 MVPQ14764 893 aaKnown RBP13.85□□□□□ -0.19
LRIF1-201ENST00000369763 NOB1Q9ULX3 412 aaKnown RBP13.85□□□□□ -0.19
LRIF1-201ENST00000369763 THUMPD2Q9BTF0 503 aaKnown RBP13.84□□□□□ -0.19
LRIF1-201ENST00000369763 C1orf115Q9H7X2 142 aa13.84□□□□□ -0.19
LRIF1-201ENST00000369763 LNPKQ9C0E8 428 aa13.84□□□□□ -0.19
LRIF1-201ENST00000369763 KDM5AP29375 1690 aaKnown RBP13.84□□□□□ -0.19
LRIF1-201ENST00000369763 MYOM1P52179 1685 aa13.84□□□□□ -0.19
LRIF1-201ENST00000369763 RIPK4P57078 832 aa13.83□□□□□ -0.2
LRIF1-201ENST00000369763 ATP7AQ04656 1500 aa13.83□□□□□ -0.2
LRIF1-201ENST00000369763 SLC24A1O60721 1099 aa13.83□□□□□ -0.2
LRIF1-201ENST00000369763 WDR63Q8IWG1 891 aa13.83□□□□□ -0.2
LRIF1-201ENST00000369763 EVC2Q86UK5 1308 aa13.83□□□□□ -0.2
LRIF1-201ENST00000369763 SPHKAPQ2M3C7 1700 aa13.83□□□□□ -0.2
LRIF1-201ENST00000369763 NPM1P06748 294 aaKnown RBP eCLIP13.83□□□□□ -0.2
LRIF1-201ENST00000369763 TBC1D32Q96NH3 1257 aa13.82□□□□□ -0.2
LRIF1-201ENST00000369763 HMOX1P09601 288 aa13.82□□□□□ -0.2
LRIF1-201ENST00000369763 TMEM57Q8N5G2 664 aa13.82□□□□□ -0.2
LRIF1-201ENST00000369763 RTEL1-TNFRSF6BF6WH68 1400 aa13.82□□□□□ -0.2
LRIF1-201ENST00000369763 ABCA6Q8N139 1617 aa13.81□□□□□ -0.2
LRIF1-201ENST00000369763 TMPOP42166 694 aaKnown RBP13.81□□□□□ -0.2
LRIF1-201ENST00000369763 C22orf23Q9BZE7 217 aa13.81□□□□□ -0.2
LRIF1-201ENST00000369763 PRAM1Q96QH2 718 aa13.8□□□□□ -0.2
LRIF1-201ENST00000369763 IDI1Q13907 227 aa13.79□□□□□ -0.2
LRIF1-201ENST00000369763 NGEFQ8N5V2 710 aa13.79□□□□□ -0.2
LRIF1-201ENST00000369763 TRIM35Q9UPQ4 493 aa13.78□□□□□ -0.2
LRIF1-201ENST00000369763 STAG3Q9UJ98 1225 aa13.78□□□□□ -0.2
LRIF1-201ENST00000369763 ATF7IPQ6VMQ6 1270 aa13.78□□□□□ -0.2
LRIF1-201ENST00000369763 MAP3K4Q9Y6R4 1608 aa13.78□□□□□ -0.2
LRIF1-201ENST00000369763 NPATQ14207 1427 aa13.77□□□□□ -0.2
LRIF1-201ENST00000369763 PANK2Q9BZ23 570 aa13.77□□□□□ -0.2
LRIF1-201ENST00000369763 CEP152O94986 1710 aa13.77□□□□□ -0.2
LRIF1-201ENST00000369763 CLASP1Q7Z460 1538 aa13.77□□□□□ -0.21
LRIF1-201ENST00000369763 ANTXR1Q9H6X2 564 aa13.77□□□□□ -0.21
LRIF1-201ENST00000369763 VGFO15240 615 aaPredicted RBP13.77□□□□□ -0.21
LRIF1-201ENST00000369763 PHF23Q9BUL5 403 aaPredicted RBP13.77□□□□□ -0.21
LRIF1-201ENST00000369763 CABP1Q9NZU7 370 aa13.77□□□□□ -0.21
LRIF1-201ENST00000369763 FYB1O15117 783 aa13.76□□□□□ -0.21
LRIF1-201ENST00000369763 ASXL2Q76L83 1435 aa13.76□□□□□ -0.21
LRIF1-201ENST00000369763 A0A1W2PP64 1363 aa13.76□□□□□ -0.21
LRIF1-201ENST00000369763 TET3O43151 1660 aa13.75□□□□□ -0.21
LRIF1-201ENST00000369763 APBB1O00213 710 aa13.75□□□□□ -0.21
LRIF1-201ENST00000369763 ANKRD45Q5TZF3 282 aa13.75□□□□□ -0.21
LRIF1-201ENST00000369763 PRKAR2BP31323 418 aa13.75□□□□□ -0.21
LRIF1-201ENST00000369763 FBXO31Q5XUX0 539 aaPredicted RBP13.75□□□□□ -0.21
LRIF1-201ENST00000369763 SHROOM2Q13796 1616 aa13.75□□□□□ -0.21
LRIF1-201ENST00000369763 DIAPH1O60610 1272 aaKnown RBP13.74□□□□□ -0.21
LRIF1-201ENST00000369763 HSP90AA1P07900 732 aaKnown RBP13.74□□□□□ -0.21
LRIF1-201ENST00000369763 DDX19BQ9UMR2 479 aa13.74□□□□□ -0.21
LRIF1-201ENST00000369763 ZNF518AQ6AHZ1 1483 aa13.74□□□□□ -0.21
LRIF1-201ENST00000369763 NINLQ9Y2I6 1382 aa13.74□□□□□ -0.21
LRIF1-201ENST00000369763 WAPLQ7Z5K2 1190 aa13.74□□□□□ -0.21
LRIF1-201ENST00000369763 SOX12O15370 315 aa13.73□□□□□ -0.21
LRIF1-201ENST00000369763 HSCBQ8IWL3 235 aa13.73□□□□□ -0.21
LRIF1-201ENST00000369763 MYOM2P54296 1465 aa13.73□□□□□ -0.21
LRIF1-201ENST00000369763 MLECQ14165 292 aa13.73□□□□□ -0.21
LRIF1-201ENST00000369763 TSPYL6Q8N831 410 aa13.73□□□□□ -0.21
LRIF1-201ENST00000369763 PLEKHF1Q96S99 279 aa13.73□□□□□ -0.21
LRIF1-201ENST00000369763 MROH2AA6NES4 1674 aa13.72□□□□□ -0.21
LRIF1-201ENST00000369763 NLRP1Q9C000 1473 aa13.72□□□□□ -0.21
LRIF1-201ENST00000369763 MCM4P33991 863 aa13.72□□□□□ -0.21
LRIF1-201ENST00000369763 CCDC27Q2M243 656 aa13.72□□□□□ -0.21
LRIF1-201ENST00000369763 PHACTR3Q96KR7 559 aa13.72□□□□□ -0.21
LRIF1-201ENST00000369763 CD109Q6YHK3 1445 aa13.72□□□□□ -0.21
LRIF1-201ENST00000369763 ZRANB1Q9UGI0 708 aa13.72□□□□□ -0.21
LRIF1-201ENST00000369763 ANKRD36BQ8N2N9 1353 aa13.72□□□□□ -0.21
LRIF1-201ENST00000369763 DCTN1Q14203 1278 aa13.72□□□□□ -0.21
LRIF1-201ENST00000369763 RBM42Q9BTD8 480 aaKnown RBP13.72□□□□□ -0.21
LRIF1-201ENST00000369763 CDK19Q9BWU1 502 aa13.71□□□□□ -0.21
LRIF1-201ENST00000369763 TERF2IPQ9NYB0 399 aa13.71□□□□□ -0.21
LRIF1-201ENST00000369763 NUTM2FA1L443 756 aa13.71□□□□□ -0.22
LRIF1-201ENST00000369763 RRAGDQ9NQL2 400 aaPredicted RBP13.71□□□□□ -0.22
LRIF1-201ENST00000369763 PPRC1Q5VV67 1664 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms