RNA–Protein interactions for RNA: ENST00000369258.8

CHD1L-202, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1L, Length 2,967 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-202ENST00000369258 FTSJ3Q8IY81 847 aaKnown RBP16.44■□□□□ 0.22
CHD1L-202ENST00000369258 EXOSC9Q06265 439 aaKnown RBP16.44■□□□□ 0.22
CHD1L-202ENST00000369258 ITPRIPQ8IWB1 547 aa16.44■□□□□ 0.22
CHD1L-202ENST00000369258 IQGAP1P46940 1657 aa16.43■□□□□ 0.22
CHD1L-202ENST00000369258 RUNDC1Q96C34 613 aa16.43■□□□□ 0.22
CHD1L-202ENST00000369258 UPF2Q9HAU5 1272 aaKnown RBP16.43■□□□□ 0.22
CHD1L-202ENST00000369258 NOS1P29475 1434 aa16.43■□□□□ 0.22
CHD1L-202ENST00000369258 ELL2O00472 640 aaPredicted RBP16.43■□□□□ 0.22
CHD1L-202ENST00000369258 RRAGDQ9NQL2 400 aaPredicted RBP16.42■□□□□ 0.22
CHD1L-202ENST00000369258 NINLQ9Y2I6 1382 aa16.42■□□□□ 0.22
CHD1L-202ENST00000369258 C1orf115Q9H7X2 142 aa16.42■□□□□ 0.22
CHD1L-202ENST00000369258 SMC4Q9NTJ3 1288 aa16.42■□□□□ 0.22
CHD1L-202ENST00000369258 FAM43AQ8N2R8 423 aa16.41■□□□□ 0.22
CHD1L-202ENST00000369258 SLC24A1O60721 1099 aa16.41■□□□□ 0.22
CHD1L-202ENST00000369258 PMFBP1Q8TBY8 1022 aa16.41■□□□□ 0.22
CHD1L-202ENST00000369258 CHD1O14646 1710 aa16.41■□□□□ 0.22
CHD1L-202ENST00000369258 THUMPD2Q9BTF0 503 aaKnown RBP16.4■□□□□ 0.22
CHD1L-202ENST00000369258 ANTXR1Q9H6X2 564 aa16.4■□□□□ 0.22
CHD1L-202ENST00000369258 NLRP1Q9C000 1473 aa16.39■□□□□ 0.21
CHD1L-202ENST00000369258 SSH1Q8WYL5 1049 aa16.39■□□□□ 0.21
CHD1L-202ENST00000369258 TBC1D32Q96NH3 1257 aa16.39■□□□□ 0.21
CHD1L-202ENST00000369258 LNPKQ9C0E8 428 aa16.39■□□□□ 0.21
CHD1L-202ENST00000369258 TRIM27P14373 513 aa16.38■□□□□ 0.21
CHD1L-202ENST00000369258 NOB1Q9ULX3 412 aaKnown RBP16.37■□□□□ 0.21
CHD1L-202ENST00000369258 CEP152O94986 1710 aa16.36■□□□□ 0.21
CHD1L-202ENST00000369258 TRPM2O94759 1503 aa16.36■□□□□ 0.21
CHD1L-202ENST00000369258 KDM5AP29375 1690 aaKnown RBP16.36■□□□□ 0.21
CHD1L-202ENST00000369258 L1TD1Q5T7N2 865 aaKnown RBP16.36■□□□□ 0.21
CHD1L-202ENST00000369258 DZIP1LQ8IYY4 767 aaKnown RBP16.36■□□□□ 0.21
CHD1L-202ENST00000369258 KANK1Q14678 1352 aa16.36■□□□□ 0.21
CHD1L-202ENST00000369258 PTPRTO14522 1441 aa16.35■□□□□ 0.21
CHD1L-202ENST00000369258 SRPK2P78362 688 aaKnown RBP16.35■□□□□ 0.21
CHD1L-202ENST00000369258 MVPQ14764 893 aaKnown RBP16.35■□□□□ 0.21
CHD1L-202ENST00000369258 TMEM57Q8N5G2 664 aa16.35■□□□□ 0.21
CHD1L-202ENST00000369258 POLR3AO14802 1390 aaPredicted RBP16.35■□□□□ 0.21
CHD1L-202ENST00000369258 MINK1Q8N4C8 1332 aaPredicted RBP16.35■□□□□ 0.21
CHD1L-202ENST00000369258 AAMPQ13685 434 aa16.35■□□□□ 0.21
CHD1L-202ENST00000369258 ABCC1P33527 1531 aa16.35■□□□□ 0.21
CHD1L-202ENST00000369258 C22orf23Q9BZE7 217 aa16.35■□□□□ 0.21
CHD1L-202ENST00000369258 RSPH6AQ9H0K4 717 aa16.35■□□□□ 0.21
CHD1L-202ENST00000369258 SPHKAPQ2M3C7 1700 aa16.35■□□□□ 0.21
CHD1L-202ENST00000369258 ABCA6Q8N139 1617 aa16.34■□□□□ 0.21
CHD1L-202ENST00000369258 XRCC6P12956 609 aaKnown RBP eCLIP16.34■□□□□ 0.21
CHD1L-202ENST00000369258 RWDD1Q9H446 243 aaPredicted RBP16.34■□□□□ 0.21
CHD1L-202ENST00000369258 ZKSCAN2Q63HK3 967 aa16.33■□□□□ 0.21
CHD1L-202ENST00000369258 RBM42Q9BTD8 480 aaKnown RBP16.33■□□□□ 0.21
CHD1L-202ENST00000369258 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.33■□□□□ 0.22e-7■■■■□ 20.7
CHD1L-202ENST00000369258 HMOX1P09601 288 aa16.32■□□□□ 0.2
CHD1L-202ENST00000369258 ZCCHC11Q5TAX3 1644 aaKnown RBP16.32■□□□□ 0.2
CHD1L-202ENST00000369258 ZFYVE16Q7Z3T8 1539 aa16.31■□□□□ 0.2
CHD1L-202ENST00000369258 VIRMAQ69YN4 1812 aaKnown RBP16.31■□□□□ 0.2
CHD1L-202ENST00000369258 TRIM35Q9UPQ4 493 aa16.31■□□□□ 0.2
CHD1L-202ENST00000369258 CD2BP2O95400 341 aaKnown RBP16.31■□□□□ 0.2
CHD1L-202ENST00000369258 WDR63Q8IWG1 891 aa16.31■□□□□ 0.2
CHD1L-202ENST00000369258 FANCAO15360 1455 aa16.3■□□□□ 0.2
CHD1L-202ENST00000369258 RAPGEF3O95398 923 aa16.3■□□□□ 0.2
CHD1L-202ENST00000369258 RIPK4P57078 832 aa16.3■□□□□ 0.2
CHD1L-202ENST00000369258 CFAP53Q96M91 514 aa16.3■□□□□ 0.2
CHD1L-202ENST00000369258 TMPOP42166 694 aaKnown RBP16.29■□□□□ 0.2
CHD1L-202ENST00000369258 ATAD2Q6PL18 1390 aa16.29■□□□□ 0.2
CHD1L-202ENST00000369258 MCM4P33991 863 aa16.29■□□□□ 0.2
CHD1L-202ENST00000369258 MROH2AA6NES4 1674 aa16.28■□□□□ 0.2
CHD1L-202ENST00000369258 PHF23Q9BUL5 403 aaPredicted RBP16.28■□□□□ 0.2
CHD1L-202ENST00000369258 MYH16Q9H6N6 1097 aa16.28■□□□□ 0.2
CHD1L-202ENST00000369258 APBB1O00213 710 aa16.28■□□□□ 0.2
CHD1L-202ENST00000369258 SHPRHQ149N8 1683 aa16.27■□□□□ 0.2
CHD1L-202ENST00000369258 TRAK2O60296 914 aa16.27■□□□□ 0.19
CHD1L-202ENST00000369258 C14orf93Q9H972 538 aaKnown RBP16.27■□□□□ 0.19
CHD1L-202ENST00000369258 ZMYM3Q14202 1370 aa16.27■□□□□ 0.19
CHD1L-202ENST00000369258 GOLGA6L3A6NEY3 463 aa16.26■□□□□ 0.19
CHD1L-202ENST00000369258 TSPYL6Q8N831 410 aa16.26■□□□□ 0.19
CHD1L-202ENST00000369258 ADGRL1O94910 1474 aa16.26■□□□□ 0.19
CHD1L-202ENST00000369258 CD109Q6YHK3 1445 aa16.26■□□□□ 0.19
CHD1L-202ENST00000369258 MAP3K4Q9Y6R4 1608 aa16.26■□□□□ 0.19
CHD1L-202ENST00000369258 ATF7IPQ6VMQ6 1270 aa16.26■□□□□ 0.19
CHD1L-202ENST00000369258 RTEL1-TNFRSF6BF6WH68 1400 aa16.25■□□□□ 0.19
CHD1L-202ENST00000369258 ATP7AQ04656 1500 aa16.25■□□□□ 0.19
CHD1L-202ENST00000369258 ANKRD45Q5TZF3 282 aa16.25■□□□□ 0.19
CHD1L-202ENST00000369258 CHAMP1Q96JM3 812 aa16.24■□□□□ 0.19
CHD1L-202ENST00000369258 PHACTR3Q96KR7 559 aa16.24■□□□□ 0.19
CHD1L-202ENST00000369258 ZRANB1Q9UGI0 708 aa16.24■□□□□ 0.19
CHD1L-202ENST00000369258 KIAA1210Q9ULL0 1709 aa16.23■□□□□ 0.19
CHD1L-202ENST00000369258 DCTN1Q14203 1278 aa16.23■□□□□ 0.19
CHD1L-202ENST00000369258 CCDC27Q2M243 656 aa16.23■□□□□ 0.19
CHD1L-202ENST00000369258 CHMP5Q9NZZ3 219 aa16.23■□□□□ 0.19
CHD1L-202ENST00000369258 FYB1O15117 783 aa16.23■□□□□ 0.19
CHD1L-202ENST00000369258 PLEKHF1Q96S99 279 aa16.23■□□□□ 0.19
CHD1L-202ENST00000369258 ZNF518AQ6AHZ1 1483 aa16.23■□□□□ 0.19
CHD1L-202ENST00000369258 A0A1W2PP64 1363 aa16.23■□□□□ 0.19
CHD1L-202ENST00000369258 NAP1L5Q96NT1 182 aaPredicted RBP16.23■□□□□ 0.19
CHD1L-202ENST00000369258 IQSEC2Q5JU85 1478 aa16.22■□□□□ 0.19
CHD1L-202ENST00000369258 UBE2Q2Q8WVN8 375 aa16.22■□□□□ 0.19
CHD1L-202ENST00000369258 PRAM1Q96QH2 718 aa16.22■□□□□ 0.19
CHD1L-202ENST00000369258 NCKAP5LQ9HCH0 1330 aa16.22■□□□□ 0.19
CHD1L-202ENST00000369258 MYOM2P54296 1465 aa16.22■□□□□ 0.19
CHD1L-202ENST00000369258 SBNO2Q9Y2G9 1366 aa16.22■□□□□ 0.19
CHD1L-202ENST00000369258 FAM83GA6ND36 823 aa16.22■□□□□ 0.19
CHD1L-202ENST00000369258 TET3O43151 1660 aa16.22■□□□□ 0.19
CHD1L-202ENST00000369258 GAS2L3Q86XJ1 694 aa16.21■□□□□ 0.19
CHD1L-202ENST00000369258 NPATQ14207 1427 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms