RNA–Protein interactions for RNA: ENST00000369068.4

RPRD2-202, Transcript of regulation of nuclear pre-mRNA domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPRD2, Length 4,612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD2-202ENST00000369068 TDRD9Q8NDG6 1382 aaKnown RBP12.9□□□□□ -0.34
RPRD2-202ENST00000369068 APPP05067 770 aa12.9□□□□□ -0.34
RPRD2-202ENST00000369068 CCDC112Q8NEF3 446 aa12.9□□□□□ -0.34
RPRD2-202ENST00000369068 CCP110O43303 1012 aa12.9□□□□□ -0.34
RPRD2-202ENST00000369068 HSP90AB4PQ58FF6 505 aa12.9□□□□□ -0.34
RPRD2-202ENST00000369068 PATL2C9JE40 543 aaKnown RBP12.89□□□□□ -0.35
RPRD2-202ENST00000369068 TAF3Q5VWG9 929 aa12.89□□□□□ -0.35
RPRD2-202ENST00000369068 PDCP20941 246 aa12.89□□□□□ -0.35
RPRD2-202ENST00000369068 LEKR1Q6ZMV7 388 aa12.89□□□□□ -0.35
RPRD2-202ENST00000369068 UBE2Q2Q8WVN8 375 aa12.89□□□□□ -0.35
RPRD2-202ENST00000369068 K7ELQ4 463 aaPredicted RBP12.89□□□□□ -0.35
RPRD2-202ENST00000369068 ERC2O15083 957 aa12.88□□□□□ -0.35
RPRD2-202ENST00000369068 CCDC47Q96A33 483 aaKnown RBP12.88□□□□□ -0.35
RPRD2-202ENST00000369068 PCMTD1Q96MG8 357 aaPredicted RBP12.88□□□□□ -0.35
RPRD2-202ENST00000369068 MARCH6O60337 910 aa12.88□□□□□ -0.35
RPRD2-202ENST00000369068 COG3Q96JB2 828 aa12.88□□□□□ -0.35
RPRD2-202ENST00000369068 BCL11BQ9C0K0 894 aaPredicted RBP12.88□□□□□ -0.35
RPRD2-202ENST00000369068 PDCL3Q9H2J4 239 aa12.88□□□□□ -0.35
RPRD2-202ENST00000369068 CSB-PGBD3P0DP91 1061 aa12.87□□□□□ -0.35
RPRD2-202ENST00000369068 DHX8Q14562 1220 aaKnown RBP12.87□□□□□ -0.35
RPRD2-202ENST00000369068 C9orf78Q9NZ63 289 aaPredicted RBP12.87□□□□□ -0.35
RPRD2-202ENST00000369068 MYOM3Q5VTT5 1437 aa12.87□□□□□ -0.35
RPRD2-202ENST00000369068 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.87□□□□□ -0.35
RPRD2-202ENST00000369068 GCC1Q96CN9 775 aa12.87□□□□□ -0.35
RPRD2-202ENST00000369068 MLECQ14165 292 aa12.87□□□□□ -0.35
RPRD2-202ENST00000369068 FGD6Q6ZV73 1430 aa12.87□□□□□ -0.35
RPRD2-202ENST00000369068 RDXP35241 583 aaKnown RBP12.87□□□□□ -0.35
RPRD2-202ENST00000369068 PDCL2Q8N4E4 241 aa12.87□□□□□ -0.35
RPRD2-202ENST00000369068 FBXW7Q969H0 707 aa12.87□□□□□ -0.35
RPRD2-202ENST00000369068 NINLQ9Y2I6 1382 aa12.87□□□□□ -0.35
RPRD2-202ENST00000369068 CCDC192P0DO97 292 aa12.86□□□□□ -0.35
RPRD2-202ENST00000369068 FKBP5Q13451 457 aaPredicted RBP12.86□□□□□ -0.35
RPRD2-202ENST00000369068 KINO60870 393 aaKnown RBP12.86□□□□□ -0.35
RPRD2-202ENST00000369068 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.86□□□□□ -0.35
RPRD2-202ENST00000369068 NGDNQ8NEJ9 315 aaKnown RBP12.86□□□□□ -0.35
RPRD2-202ENST00000369068 OLFM4Q6UX06 510 aa12.85□□□□□ -0.35
RPRD2-202ENST00000369068 TCP11L2Q8N4U5 519 aa12.85□□□□□ -0.35
RPRD2-202ENST00000369068 NEXNQ0ZGT2 675 aa12.85□□□□□ -0.35
RPRD2-202ENST00000369068 FIBPO43427 364 aa12.85□□□□□ -0.35
RPRD2-202ENST00000369068 PSMA5P28066 241 aa12.85□□□□□ -0.35
RPRD2-202ENST00000369068 TRDNQ13061 729 aa12.85□□□□□ -0.35
RPRD2-202ENST00000369068 SPC24Q8NBT2 197 aa12.85□□□□□ -0.35
RPRD2-202ENST00000369068 VGFO15240 615 aaPredicted RBP12.84□□□□□ -0.35
RPRD2-202ENST00000369068 G3BP1Q13283 466 aaKnown RBP eCLIP12.84□□□□□ -0.35
RPRD2-202ENST00000369068 WDR33Q9C0J8 1336 aaKnown RBP12.84□□□□□ -0.35
RPRD2-202ENST00000369068 DCTN1Q14203 1278 aa12.84□□□□□ -0.35
RPRD2-202ENST00000369068 ERICH3Q5RHP9 1530 aa12.84□□□□□ -0.35
RPRD2-202ENST00000369068 CCDC27Q2M243 656 aa12.84□□□□□ -0.35
RPRD2-202ENST00000369068 CCDC191Q8NCU4 936 aa12.84□□□□□ -0.35
RPRD2-202ENST00000369068 TEFQ10587 303 aa12.83□□□□□ -0.36
RPRD2-202ENST00000369068 PDILTQ8N807 584 aa12.83□□□□□ -0.36
RPRD2-202ENST00000369068 LTV1Q96GA3 475 aaPredicted RBP12.83□□□□□ -0.36
RPRD2-202ENST00000369068 PPP2R1AP30153 589 aa12.83□□□□□ -0.36
RPRD2-202ENST00000369068 RRP12Q5JTH9 1297 aaKnown RBP12.83□□□□□ -0.36
RPRD2-202ENST00000369068 NUTM2DQ5VT03 806 aaPredicted RBP12.83□□□□□ -0.36
RPRD2-202ENST00000369068 BCAR3O75815 825 aa12.83□□□□□ -0.36
RPRD2-202ENST00000369068 NCBP3Q53F19 620 aaKnown RBP12.83□□□□□ -0.36
RPRD2-202ENST00000369068 CCDC9Q9Y3X0 531 aaKnown RBP12.83□□□□□ -0.36
RPRD2-202ENST00000369068 SAFBQ15424 915 aaKnown RBP eCLIP12.82□□□□□ -0.36
RPRD2-202ENST00000369068 SMC2O95347 1197 aa12.82□□□□□ -0.36
RPRD2-202ENST00000369068 KIF21BO75037 1637 aa12.82□□□□□ -0.36
RPRD2-202ENST00000369068 RRBP1Q9P2E9 1410 aaKnown RBP12.81□□□□□ -0.36
RPRD2-202ENST00000369068 MPNDQ8N594 471 aa12.81□□□□□ -0.36
RPRD2-202ENST00000369068 CCDC184Q52MB2 194 aa12.81□□□□□ -0.36
RPRD2-202ENST00000369068 CNTROBQ8N137 903 aa12.81□□□□□ -0.36
RPRD2-202ENST00000369068 CT47B1P0C2W7 299 aaPredicted RBP12.8□□□□□ -0.36
RPRD2-202ENST00000369068 EIF2S2P20042 333 aaKnown RBP12.8□□□□□ -0.36
RPRD2-202ENST00000369068 CAGE1Q8TC20 777 aa12.8□□□□□ -0.36
RPRD2-202ENST00000369068 TSPYL1Q9H0U9 437 aa12.8□□□□□ -0.36
RPRD2-202ENST00000369068 GNAI3P08754 354 aa12.79□□□□□ -0.36
RPRD2-202ENST00000369068 EXOSC9Q06265 439 aaKnown RBP12.79□□□□□ -0.36
RPRD2-202ENST00000369068 DDX58O95786 925 aaKnown RBP12.79□□□□□ -0.36
RPRD2-202ENST00000369068 FMNL2Q96PY5 1086 aa12.79□□□□□ -0.36
RPRD2-202ENST00000369068 AXDND1Q5T1B0 1012 aaPredicted RBP12.79□□□□□ -0.36
RPRD2-202ENST00000369068 EIF3JO75822 258 aaKnown RBP12.79□□□□□ -0.36
RPRD2-202ENST00000369068 USP8P40818 1118 aa12.79□□□□□ -0.36
RPRD2-202ENST00000369068 MTHFSP49914 203 aa12.79□□□□□ -0.36
RPRD2-202ENST00000369068 NAP1L1P55209 391 aaKnown RBP12.79□□□□□ -0.36
RPRD2-202ENST00000369068 AEBP1Q8IUX7 1158 aa12.79□□□□□ -0.36
RPRD2-202ENST00000369068 ERLIN1O75477 346 aa12.78□□□□□ -0.36
RPRD2-202ENST00000369068 KRT85P78386 507 aa12.78□□□□□ -0.36
RPRD2-202ENST00000369068 JPH4Q96JJ6 628 aa12.78□□□□□ -0.36
RPRD2-202ENST00000369068 ZMYND15Q9H091 742 aa12.78□□□□□ -0.36
RPRD2-202ENST00000369068 TNMDQ9H2S6 317 aa12.78□□□□□ -0.36
RPRD2-202ENST00000369068 LRRC9Q6ZRR7 1453 aa12.78□□□□□ -0.36
RPRD2-202ENST00000369068 FOSBP53539 338 aa12.78□□□□□ -0.36
RPRD2-202ENST00000369068 RALYLQ86SE5 291 aaKnown RBP12.78□□□□□ -0.36
RPRD2-202ENST00000369068 IGF1RP08069 1367 aa12.78□□□□□ -0.36
RPRD2-202ENST00000369068 UBTFL1P0CB47 393 aaPredicted RBP12.78□□□□□ -0.36
RPRD2-202ENST00000369068 MVPQ14764 893 aaKnown RBP12.78□□□□□ -0.36
RPRD2-202ENST00000369068 CLASRPQ8N2M8 674 aaKnown RBP12.78□□□□□ -0.36
RPRD2-202ENST00000369068 FYCO1Q9BQS8 1478 aa12.78□□□□□ -0.36
RPRD2-202ENST00000369068 FANCD2Q9BXW9 1451 aa12.78□□□□□ -0.36
RPRD2-202ENST00000369068 C1orf141Q5JVX7 400 aa12.77□□□□□ -0.36
RPRD2-202ENST00000369068 NFXL1Q6ZNB6 911 aa12.77□□□□□ -0.36
RPRD2-202ENST00000369068 SMARCE1Q969G3 411 aa12.77□□□□□ -0.36
RPRD2-202ENST00000369068 CASKIN1Q8WXD9 1431 aa12.77□□□□□ -0.36
RPRD2-202ENST00000369068 ZNF396Q96N95 335 aaPredicted RBP12.77□□□□□ -0.37
RPRD2-202ENST00000369068 TSPYL4Q9UJ04 414 aa12.77□□□□□ -0.37
RPRD2-202ENST00000369068 MINK1Q8N4C8 1332 aaPredicted RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms