RNA–Protein interactions for RNA: ENST00000368843.7

SNX27-203, Transcript of sorting nexin family member 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNX27, Length 7,197 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-203ENST00000368843 ZNF428Q96B54 188 aa21.77■■□□□ 1.08
SNX27-203ENST00000368843 VPS37CA5D8V6 355 aaPredicted RBP21.76■■□□□ 1.07
SNX27-203ENST00000368843 PDE4AP27815 886 aa21.76■■□□□ 1.07
SNX27-203ENST00000368843 GNAI1P63096 354 aa21.76■■□□□ 1.07
SNX27-203ENST00000368843 ABTB2Q8N961 1025 aa21.76■■□□□ 1.07
SNX27-203ENST00000368843 KIF6Q6ZMV9 814 aa21.76■■□□□ 1.07
SNX27-203ENST00000368843 RBM42Q9BTD8 480 aaKnown RBP21.76■■□□□ 1.07
SNX27-203ENST00000368843 ARHGAP5Q13017 1502 aa21.76■■□□□ 1.07
SNX27-203ENST00000368843 TMEM132EQ6IEE7 984 aa21.75■■□□□ 1.07
SNX27-203ENST00000368843 RALYLQ86SE5 291 aaKnown RBP21.75■■□□□ 1.07
SNX27-203ENST00000368843 PRKRIP1Q9H875 184 aaPredicted RBP21.75■■□□□ 1.07
SNX27-203ENST00000368843 SAFBQ15424 915 aaKnown RBP eCLIP21.75■■□□□ 1.07
SNX27-203ENST00000368843 SKOR2Q2VWA4 1001 aaPredicted RBP21.74■■□□□ 1.07
SNX27-203ENST00000368843 HSP90AB4PQ58FF6 505 aa21.74■■□□□ 1.07
SNX27-203ENST00000368843 GPRASP1Q5JY77 1395 aa21.74■■□□□ 1.07
SNX27-203ENST00000368843 SMC3Q9UQE7 1217 aa21.73■■□□□ 1.07
SNX27-203ENST00000368843 INTS3Q68E01 1043 aaKnown RBP21.73■■□□□ 1.07
SNX27-203ENST00000368843 UBTFL1P0CB47 393 aaPredicted RBP21.72■■□□□ 1.07
SNX27-203ENST00000368843 NUTM2BA6NNL0 878 aaPredicted RBP21.72■■□□□ 1.07
SNX27-203ENST00000368843 NUTM2EB1AL46 878 aaPredicted RBP21.72■■□□□ 1.07
SNX27-203ENST00000368843 NUTM2AQ8IVF1 878 aaPredicted RBP21.72■■□□□ 1.07
SNX27-203ENST00000368843 RUSC2Q8N2Y8 1516 aa21.72■■□□□ 1.07
SNX27-203ENST00000368843 NAP1L1P55209 391 aaKnown RBP21.71■■□□□ 1.07
SNX27-203ENST00000368843 MYOM3Q5VTT5 1437 aa21.71■■□□□ 1.07
SNX27-203ENST00000368843 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.7■■□□□ 1.076e-14■■■■■ 335.4
SNX27-203ENST00000368843 BRMS1Q9HCU9 246 aa21.7■■□□□ 1.06
SNX27-203ENST00000368843 R3HCC1Q9Y3T6 440 aaKnown RBP21.7■■□□□ 1.06
SNX27-203ENST00000368843 WASHC2AQ641Q2 1341 aa21.7■■□□□ 1.06
SNX27-203ENST00000368843 CT47A1Q5JQC4 288 aaPredicted RBP21.7■■□□□ 1.06
SNX27-203ENST00000368843 SF3B2Q13435 895 aaKnown RBP21.7■■□□□ 1.06
SNX27-203ENST00000368843 HSP90AA2PQ14568 343 aaPredicted RBP21.7■■□□□ 1.06
SNX27-203ENST00000368843 ZNF644Q9H582 1327 aaPredicted RBP21.69■■□□□ 1.06
SNX27-203ENST00000368843 RAD54L2Q9Y4B4 1467 aa21.69■■□□□ 1.06
SNX27-203ENST00000368843 LNPKQ9C0E8 428 aa21.69■■□□□ 1.06
SNX27-203ENST00000368843 FGD5Q6ZNL6 1462 aa21.69■■□□□ 1.06
SNX27-203ENST00000368843 EPS15P42566 896 aa21.69■■□□□ 1.06
SNX27-203ENST00000368843 ZNF771Q7L3S4 317 aaPredicted RBP21.69■■□□□ 1.06
SNX27-203ENST00000368843 ZBED9Q6R2W3 1325 aa21.69■■□□□ 1.06
SNX27-203ENST00000368843 CCAR1Q8IX12 1150 aaKnown RBP21.68■■□□□ 1.06
SNX27-203ENST00000368843 PROSER2Q86WR7 435 aaPredicted RBP21.68■■□□□ 1.06
SNX27-203ENST00000368843 ODF2Q5BJF6 829 aa21.68■■□□□ 1.06
SNX27-203ENST00000368843 NINLQ9Y2I6 1382 aa21.68■■□□□ 1.06
SNX27-203ENST00000368843 TMEM132AQ24JP5 1023 aa21.68■■□□□ 1.06
SNX27-203ENST00000368843 SMG6Q86US8 1419 aaKnown RBP21.67■■□□□ 1.06
SNX27-203ENST00000368843 SASS6Q6UVJ0 657 aa21.67■■□□□ 1.06
SNX27-203ENST00000368843 CUX1P39880 1505 aa21.67■■□□□ 1.06
SNX27-203ENST00000368843 HOMER1Q86YM7 354 aa21.67■■□□□ 1.06
SNX27-203ENST00000368843 DNAJC2Q99543 621 aaKnown RBP21.67■■□□□ 1.06
SNX27-203ENST00000368843 TXNDC2Q86VQ3 553 aa21.66■■□□□ 1.06
SNX27-203ENST00000368843 SETQ01105 290 aaPredicted RBP21.66■■□□□ 1.06
SNX27-203ENST00000368843 TBC1D2BQ9UPU7 963 aa21.65■■□□□ 1.06
SNX27-203ENST00000368843 GPS2Q13227 327 aa21.65■■□□□ 1.06
SNX27-203ENST00000368843 FSD1Q9BTV5 496 aa21.64■■□□□ 1.06
SNX27-203ENST00000368843 XBP1P17861 261 aa21.64■■□□□ 1.05
SNX27-203ENST00000368843 CNTROBQ8N137 903 aa21.64■■□□□ 1.05
SNX27-203ENST00000368843 SKIDA1Q1XH10 827 aa21.63■■□□□ 1.05
SNX27-203ENST00000368843 ZFYVE27Q5T4F4 411 aa21.63■■□□□ 1.05
SNX27-203ENST00000368843 PLEKHO1Q53GL0 409 aaPredicted RBP21.63■■□□□ 1.05
SNX27-203ENST00000368843 CCDC30Q5VVM6 783 aa21.63■■□□□ 1.05
SNX27-203ENST00000368843 CCDC73Q6ZRK6 1079 aa21.62■■□□□ 1.05
SNX27-203ENST00000368843 VSIG10Q8N0Z9 540 aa21.62■■□□□ 1.05
SNX27-203ENST00000368843 PANK1Q8TE04 598 aa21.61■■□□□ 1.05
SNX27-203ENST00000368843 CNNM1Q9NRU3 951 aa21.61■■□□□ 1.05
SNX27-203ENST00000368843 RRP12Q5JTH9 1297 aaKnown RBP21.61■■□□□ 1.05
SNX27-203ENST00000368843 TTC39AQ5SRH9 613 aa21.6■■□□□ 1.05
SNX27-203ENST00000368843 AQRO60306 1485 aaKnown RBP eCLIP21.6■■□□□ 1.05
SNX27-203ENST00000368843 PIP4K2BP78356 416 aa21.6■■□□□ 1.05
SNX27-203ENST00000368843 TTLL5Q6EMB2 1281 aa21.6■■□□□ 1.05
SNX27-203ENST00000368843 ATP2B2Q01814 1243 aa21.6■■□□□ 1.05
SNX27-203ENST00000368843 GAS2L2Q8NHY3 880 aa21.59■■□□□ 1.05
SNX27-203ENST00000368843 DDX54Q8TDD1 881 aaKnown RBP21.59■■□□□ 1.05
SNX27-203ENST00000368843 SART3Q15020 963 aaKnown RBP21.59■■□□□ 1.05
SNX27-203ENST00000368843 TATP17735 454 aaPredicted RBP21.59■■□□□ 1.05
SNX27-203ENST00000368843 OLFM4Q6UX06 510 aa21.59■■□□□ 1.05
SNX27-203ENST00000368843 STK11IPQ8N1F8 1099 aa21.59■■□□□ 1.05
SNX27-203ENST00000368843 WWC2Q6AWC2 1192 aa21.58■■□□□ 1.05
SNX27-203ENST00000368843 FAM13BQ9NYF5 915 aa21.58■■□□□ 1.05
SNX27-203ENST00000368843 SLC3A2P08195 630 aaKnown RBP21.58■■□□□ 1.05
SNX27-203ENST00000368843 TOM1L2Q6ZVM7 507 aa21.58■■□□□ 1.04
SNX27-203ENST00000368843 CABP4P57796 275 aa21.57■■□□□ 1.04
SNX27-203ENST00000368843 MTHFSP49914 203 aa21.57■■□□□ 1.04
SNX27-203ENST00000368843 PSMA5P28066 241 aa21.57■■□□□ 1.04
SNX27-203ENST00000368843 RRBP1Q9P2E9 1410 aaKnown RBP21.57■■□□□ 1.04
SNX27-203ENST00000368843 HSP90AB2PQ58FF8 381 aa21.56■■□□□ 1.04
SNX27-203ENST00000368843 PRAM1Q96QH2 718 aa21.56■■□□□ 1.04
SNX27-203ENST00000368843 SURF6O75683 361 aaKnown RBP21.56■■□□□ 1.04
SNX27-203ENST00000368843 FYCO1Q9BQS8 1478 aa21.56■■□□□ 1.04
SNX27-203ENST00000368843 PDILTQ8N807 584 aa21.55■■□□□ 1.04
SNX27-203ENST00000368843 GSE1Q14687 1217 aa21.55■■□□□ 1.04
SNX27-203ENST00000368843 CDK5RAP3Q96JB5 506 aa21.55■■□□□ 1.04
SNX27-203ENST00000368843 CLASRPQ8N2M8 674 aaKnown RBP21.55■■□□□ 1.04
SNX27-203ENST00000368843 OFD1O75665 1012 aa21.54■■□□□ 1.04
SNX27-203ENST00000368843 CNTLNQ9NXG0 1405 aa21.54■■□□□ 1.04
SNX27-203ENST00000368843 ATP2B1P20020 1258 aa21.54■■□□□ 1.04
SNX27-203ENST00000368843 RBM5P52756 815 aaKnown RBP eCLIP21.54■■□□□ 1.04
SNX27-203ENST00000368843 CDC45O75419 566 aa21.54■■□□□ 1.04
SNX27-203ENST00000368843 AFAP1Q8N556 730 aa21.54■■□□□ 1.04
SNX27-203ENST00000368843 FGD6Q6ZV73 1430 aa21.53■■□□□ 1.04
SNX27-203ENST00000368843 ANKRD50Q9ULJ7 1429 aa21.53■■□□□ 1.04
SNX27-203ENST00000368843 C22orf23Q9BZE7 217 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms