RNA–Protein interactions for RNA: ENST00000368638.4

LAMA4-203, Transcript of laminin subunit alpha 4, humanhuman

TSL 2 BASIC

Gene LAMA4, Length 1,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-203ENST00000368638 COL22A1Q8NFW1 1626 aaPredicted RBP22.21■■□□□ 1.15
LAMA4-203ENST00000368638 RGL3Q3MIN7 710 aa22.21■■□□□ 1.15
LAMA4-203ENST00000368638 LRPPRCP42704 1394 aaKnown RBP22.21■■□□□ 1.15
LAMA4-203ENST00000368638 NRXN1Q9ULB1 1477 aa22.19■■□□□ 1.14
LAMA4-203ENST00000368638 ABCC11Q96J66 1382 aa22.18■■□□□ 1.14
LAMA4-203ENST00000368638 PXDNQ92626 1479 aa22.17■■□□□ 1.14
LAMA4-203ENST00000368638 FMN2Q9NZ56 1722 aa22.17■■□□□ 1.14
LAMA4-203ENST00000368638 MYOM2P54296 1465 aa22.16■■□□□ 1.14
LAMA4-203ENST00000368638 PLEKHH1Q9ULM0 1364 aa22.16■■□□□ 1.14
LAMA4-203ENST00000368638 RXRBP28702 533 aa22.16■■□□□ 1.14
LAMA4-203ENST00000368638 ACIN1Q9UKV3 1341 aaKnown RBP22.15■■□□□ 1.14
LAMA4-203ENST00000368638 WAPLQ7Z5K2 1190 aa22.15■■□□□ 1.14
LAMA4-203ENST00000368638 C8orf37Q96NL8 207 aa22.15■■□□□ 1.14
LAMA4-203ENST00000368638 YTHDC2Q9H6S0 1430 aaKnown RBP22.14■■□□□ 1.14
LAMA4-203ENST00000368638 TMEM132EQ6IEE7 984 aa22.14■■□□□ 1.13
LAMA4-203ENST00000368638 STK26Q9P289 416 aa22.14■■□□□ 1.13
LAMA4-203ENST00000368638 RGS12O14924 1447 aa22.13■■□□□ 1.13
LAMA4-203ENST00000368638 RAB3GAP2Q9H2M9 1393 aa22.12■■□□□ 1.13
LAMA4-203ENST00000368638 UPF1Q92900 1129 aaKnown RBP eCLIP22.11■■□□□ 1.13
LAMA4-203ENST00000368638 NPHP3Q7Z494 1330 aa22.1■■□□□ 1.13
LAMA4-203ENST00000368638 ESCO1Q5FWF5 840 aa22.1■■□□□ 1.13
LAMA4-203ENST00000368638 MARF1Q9Y4F3 1742 aaKnown RBP22.09■■□□□ 1.13
LAMA4-203ENST00000368638 ADAMTS2O95450 1211 aa22.09■■□□□ 1.13
LAMA4-203ENST00000368638 C14orf93Q9H972 538 aaKnown RBP22.09■■□□□ 1.13
LAMA4-203ENST00000368638 KIF1AQ12756 1690 aa22.09■■□□□ 1.13
LAMA4-203ENST00000368638 QTRT2Q9H974 415 aaKnown RBP22.08■■□□□ 1.13
LAMA4-203ENST00000368638 SIRT1Q96EB6 747 aa22.07■■□□□ 1.12
LAMA4-203ENST00000368638 RBM6P78332 1123 aaKnown RBP22.06■■□□□ 1.12
LAMA4-203ENST00000368638 TRIM26Q12899 539 aaPredicted RBP22.06■■□□□ 1.12
LAMA4-203ENST00000368638 NGLY1Q96IV0 654 aa22.06■■□□□ 1.12
LAMA4-203ENST00000368638 NUTM2FA1L443 756 aa22.05■■□□□ 1.12
LAMA4-203ENST00000368638 FOXO3O43524 673 aa22.05■■□□□ 1.12
LAMA4-203ENST00000368638 CFAP70Q5T0N1 1121 aa22.05■■□□□ 1.12
LAMA4-203ENST00000368638 ADGRB1O14514 1584 aa22.04■■□□□ 1.12
LAMA4-203ENST00000368638 FNBP4Q8N3X1 1017 aaPredicted RBP22.04■■□□□ 1.12
LAMA4-203ENST00000368638 RGPD8O14715 1765 aaPredicted RBP22.04■■□□□ 1.12
LAMA4-203ENST00000368638 DLC1Q96QB1 1528 aa22.03■■□□□ 1.12
LAMA4-203ENST00000368638 XPCQ01831 940 aaPredicted RBP22.03■■□□□ 1.12
LAMA4-203ENST00000368638 ATRNO75882 1429 aa22.03■■□□□ 1.12
LAMA4-203ENST00000368638 DHX57Q6P158 1386 aaKnown RBP22.02■■□□□ 1.12
LAMA4-203ENST00000368638 ADGRB2O60241 1585 aa22.01■■□□□ 1.11
LAMA4-203ENST00000368638 USP21Q9UK80 565 aa22.01■■□□□ 1.11
LAMA4-203ENST00000368638 USP32Q8NFA0 1604 aa22■■□□□ 1.11
LAMA4-203ENST00000368638 BCL9LQ86UU0 1499 aa22■■□□□ 1.11
LAMA4-203ENST00000368638 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.99■■□□□ 1.11
LAMA4-203ENST00000368638 SPATA31A3Q5VYP0 1347 aa21.98■■□□□ 1.11
LAMA4-203ENST00000368638 TRPC5Q9UL62 973 aaPredicted RBP21.97■■□□□ 1.11
LAMA4-203ENST00000368638 PRAM1Q96QH2 718 aa21.96■■□□□ 1.11
LAMA4-203ENST00000368638 ABCA3Q99758 1704 aa21.95■■□□□ 1.1
LAMA4-203ENST00000368638 TNS3Q68CZ2 1445 aa21.94■■□□□ 1.1
LAMA4-203ENST00000368638 SLIT2O94813 1529 aa21.93■■□□□ 1.1
LAMA4-203ENST00000368638 KRT28Q7Z3Y7 464 aa21.93■■□□□ 1.1
LAMA4-203ENST00000368638 ANKARQ7Z5J8 1434 aa21.93■■□□□ 1.1
LAMA4-203ENST00000368638 SAFB2Q14151 953 aaKnown RBP eCLIP21.92■■□□□ 1.1
LAMA4-203ENST00000368638 PHF8Q9UPP1 1060 aa21.92■■□□□ 1.1
LAMA4-203ENST00000368638 HRCP23327 699 aa21.91■■□□□ 1.1
LAMA4-203ENST00000368638 TRPM3Q9HCF6 1732 aaPredicted RBP21.9■■□□□ 1.1
LAMA4-203ENST00000368638 GLI3P10071 1580 aa21.9■■□□□ 1.1
LAMA4-203ENST00000368638 SBNO1A3KN83 1393 aa21.89■■□□□ 1.1
LAMA4-203ENST00000368638 ATAD2Q6PL18 1390 aa21.89■■□□□ 1.1
LAMA4-203ENST00000368638 ARHGEF28Q8N1W1 1705 aaKnown RBP21.89■■□□□ 1.09
LAMA4-203ENST00000368638 PLCH1Q4KWH8 1693 aa21.88■■□□□ 1.09
LAMA4-203ENST00000368638 TULP4Q9NRJ4 1543 aa21.87■■□□□ 1.09
LAMA4-203ENST00000368638 DCAF11Q8TEB1 546 aa21.87■■□□□ 1.09
LAMA4-203ENST00000368638 POGKQ9P215 609 aa21.87■■□□□ 1.09
LAMA4-203ENST00000368638 TRAK1Q9UPV9 953 aa21.86■■□□□ 1.09
LAMA4-203ENST00000368638 NWD2Q9ULI1 1742 aa21.86■■□□□ 1.09
LAMA4-203ENST00000368638 ALS2Q96Q42 1657 aa21.85■■□□□ 1.09
LAMA4-203ENST00000368638 RALGAPBQ86X10 1494 aa21.85■■□□□ 1.09
LAMA4-203ENST00000368638 PSME1Q06323 249 aa21.85■■□□□ 1.09
LAMA4-203ENST00000368638 GJD4Q96KN9 370 aaPredicted RBP21.85■■□□□ 1.09
LAMA4-203ENST00000368638 KDM2AQ9Y2K7 1162 aa21.85■■□□□ 1.09
LAMA4-203ENST00000368638 PRR36Q9H6K5 1346 aa21.84■■□□□ 1.09
LAMA4-203ENST00000368638 STAC3Q96MF2 364 aa21.84■■□□□ 1.09
LAMA4-203ENST00000368638 UNC5CLQ8IV45 518 aa21.83■■□□□ 1.09
LAMA4-203ENST00000368638 HIRIP3Q9BW71 556 aaPredicted RBP21.83■■□□□ 1.09
LAMA4-203ENST00000368638 ARHGEF10O15013 1369 aa21.83■■□□□ 1.08
LAMA4-203ENST00000368638 PMFBP1Q8TBY8 1022 aa21.82■■□□□ 1.08
LAMA4-203ENST00000368638 CABLES1Q8TDN4 633 aa21.82■■□□□ 1.08
LAMA4-203ENST00000368638 CRYBG1Q9Y4K1 1723 aa21.82■■□□□ 1.08
LAMA4-203ENST00000368638 MINK1Q8N4C8 1332 aaPredicted RBP21.81■■□□□ 1.08
LAMA4-203ENST00000368638 EIF3AQ14152 1382 aaKnown RBP21.81■■□□□ 1.08
LAMA4-203ENST00000368638 NRAPQ86VF7 1730 aa21.8■■□□□ 1.08
LAMA4-203ENST00000368638 BRWD3Q6RI45 1802 aa21.79■■□□□ 1.08
LAMA4-203ENST00000368638 KIAA1210Q9ULL0 1709 aa21.79■■□□□ 1.08
LAMA4-203ENST00000368638 ATP7BP35670 1465 aa21.78■■□□□ 1.08
LAMA4-203ENST00000368638 ITSN1Q15811 1721 aa21.78■■□□□ 1.08
LAMA4-203ENST00000368638 WASLO00401 505 aaPredicted RBP21.78■■□□□ 1.08
LAMA4-203ENST00000368638 PCGF6Q9BYE7 350 aa21.78■■□□□ 1.08
LAMA4-203ENST00000368638 TOPAZ1Q8N9V7 1692 aa21.75■■□□□ 1.07
LAMA4-203ENST00000368638 HAP1P54257 671 aaPredicted RBP21.75■■□□□ 1.07
LAMA4-203ENST00000368638 VPS72Q15906 364 aa21.75■■□□□ 1.07
LAMA4-203ENST00000368638 EP400Q96L91 3159 aa21.75■■□□□ 1.07
LAMA4-203ENST00000368638 LMOD2Q6P5Q4 547 aa21.74■■□□□ 1.07
LAMA4-203ENST00000368638 GPRASP1Q5JY77 1395 aa21.74■■□□□ 1.07
LAMA4-203ENST00000368638 PLEKHG5O94827 1062 aa21.73■■□□□ 1.07
LAMA4-203ENST00000368638 COL14A1Q05707 1796 aaKnown RBP21.73■■□□□ 1.07
LAMA4-203ENST00000368638 FAM83GA6ND36 823 aa21.72■■□□□ 1.07
LAMA4-203ENST00000368638 PHRF1Q9P1Y6 1649 aaKnown RBP21.69■■□□□ 1.06
LAMA4-203ENST00000368638 ONECUT3O60422 494 aaPredicted RBP21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms