RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 SLC4A1APQ9BWU0 796 aaKnown RBP14.71□□□□□ -0.06
TPM3-210ENST00000368530 SOS2Q07890 1332 aaPredicted RBP14.7□□□□□ -0.06
TPM3-210ENST00000368530 ORAI2Q96SN7 254 aa14.7□□□□□ -0.06
TPM3-210ENST00000368530 RPGRIP1LQ68CZ1 1315 aa14.69□□□□□ -0.06
TPM3-210ENST00000368530 LAMC1P11047 1609 aa14.69□□□□□ -0.06
TPM3-210ENST00000368530 C8orf37Q96NL8 207 aa14.68□□□□□ -0.06
TPM3-210ENST00000368530 QTRT2Q9H974 415 aaKnown RBP14.68□□□□□ -0.06
TPM3-210ENST00000368530 HFM1A2PYH4 1435 aa14.68□□□□□ -0.06
TPM3-210ENST00000368530 KIF1BO60333 1816 aa14.67□□□□□ -0.06
TPM3-210ENST00000368530 RBM6P78332 1123 aaKnown RBP14.66□□□□□ -0.06
TPM3-210ENST00000368530 RGS12O14924 1447 aa14.65□□□□□ -0.06
TPM3-210ENST00000368530 ADAMTS2O95450 1211 aa14.64□□□□□ -0.07
TPM3-210ENST00000368530 FNBP4Q8N3X1 1017 aaPredicted RBP14.63□□□□□ -0.07
TPM3-210ENST00000368530 NGLY1Q96IV0 654 aa14.63□□□□□ -0.07
TPM3-210ENST00000368530 ADGRF5Q8IZF2 1346 aa14.62□□□□□ -0.07
TPM3-210ENST00000368530 PPLO60437 1756 aa14.61□□□□□ -0.07
TPM3-210ENST00000368530 SPATA31E1Q6ZUB1 1445 aa14.59□□□□□ -0.07
TPM3-210ENST00000368530 USP21Q9UK80 565 aa14.59□□□□□ -0.07
TPM3-210ENST00000368530 TECPR2O15040 1411 aa14.59□□□□□ -0.07
TPM3-210ENST00000368530 MYOM2P54296 1465 aa14.58□□□□□ -0.07
TPM3-210ENST00000368530 PXDNQ92626 1479 aa14.58□□□□□ -0.07
TPM3-210ENST00000368530 ESCO1Q5FWF5 840 aa14.58□□□□□ -0.08
TPM3-210ENST00000368530 WAPLQ7Z5K2 1190 aa14.58□□□□□ -0.08
TPM3-210ENST00000368530 COL22A1Q8NFW1 1626 aaPredicted RBP14.58□□□□□ -0.08
TPM3-210ENST00000368530 ATRNO75882 1429 aa14.57□□□□□ -0.08
TPM3-210ENST00000368530 CDC42BPGQ6DT37 1551 aa14.57□□□□□ -0.08
TPM3-210ENST00000368530 NPHP3Q7Z494 1330 aa14.57□□□□□ -0.08
TPM3-210ENST00000368530 RAB3GAP2Q9H2M9 1393 aa14.57□□□□□ -0.08
TPM3-210ENST00000368530 FOXO3O43524 673 aa14.56□□□□□ -0.08
TPM3-210ENST00000368530 TRPC5Q9UL62 973 aaPredicted RBP14.56□□□□□ -0.08
TPM3-210ENST00000368530 BCL9LQ86UU0 1499 aa14.56□□□□□ -0.08
TPM3-210ENST00000368530 LRPPRCP42704 1394 aaKnown RBP14.56□□□□□ -0.08
TPM3-210ENST00000368530 ABCC11Q96J66 1382 aa14.56□□□□□ -0.08
TPM3-210ENST00000368530 RGL3Q3MIN7 710 aa14.56□□□□□ -0.08
TPM3-210ENST00000368530 TMEM132EQ6IEE7 984 aa14.56□□□□□ -0.08
TPM3-210ENST00000368530 PLEKHH1Q9ULM0 1364 aa14.55□□□□□ -0.08
TPM3-210ENST00000368530 XPCQ01831 940 aaPredicted RBP14.55□□□□□ -0.08
TPM3-210ENST00000368530 MPHOSPH9Q99550 1183 aa14.55□□□□□ -0.08
TPM3-210ENST00000368530 STK26Q9P289 416 aa14.55□□□□□ -0.08
TPM3-210ENST00000368530 CCDC144AA2RUR9 1427 aa14.54□□□□□ -0.08
TPM3-210ENST00000368530 DHX57Q6P158 1386 aaKnown RBP14.54□□□□□ -0.08
TPM3-210ENST00000368530 ANKRD30BQ9BXX2 1392 aa14.54□□□□□ -0.08
TPM3-210ENST00000368530 NUTM2FA1L443 756 aa14.53□□□□□ -0.08
TPM3-210ENST00000368530 PIK3C2GO75747 1445 aa14.53□□□□□ -0.08
TPM3-210ENST00000368530 ATAD2Q6PL18 1390 aa14.52□□□□□ -0.08
TPM3-210ENST00000368530 SRCAPQ6ZRS2 3230 aa14.52□□□□□ -0.08
TPM3-210ENST00000368530 SIRT1Q96EB6 747 aa14.51□□□□□ -0.09
TPM3-210ENST00000368530 IFT172Q9UG01 1749 aa14.51□□□□□ -0.09
TPM3-210ENST00000368530 SPATA31A3Q5VYP0 1347 aa14.51□□□□□ -0.09
TPM3-210ENST00000368530 GJD4Q96KN9 370 aaPredicted RBP14.5□□□□□ -0.09
TPM3-210ENST00000368530 YTHDC2Q9H6S0 1430 aaKnown RBP14.5□□□□□ -0.09
TPM3-210ENST00000368530 C14orf93Q9H972 538 aaKnown RBP14.5□□□□□ -0.09
TPM3-210ENST00000368530 EP400Q96L91 3159 aa14.48□□□□□ -0.09
TPM3-210ENST00000368530 KNDC1Q76NI1 1749 aa14.48□□□□□ -0.09
TPM3-210ENST00000368530 SLIT2O94813 1529 aa14.48□□□□□ -0.09
TPM3-210ENST00000368530 NRXN1Q9ULB1 1477 aa14.48□□□□□ -0.09
TPM3-210ENST00000368530 KRT28Q7Z3Y7 464 aa14.47□□□□□ -0.09
TPM3-210ENST00000368530 FMN2Q9NZ56 1722 aa14.47□□□□□ -0.09
TPM3-210ENST00000368530 POTEDQ86YR6 584 aa14.46□□□□□ -0.09
TPM3-210ENST00000368530 UNC5CLQ8IV45 518 aa14.46□□□□□ -0.09
TPM3-210ENST00000368530 MARF1Q9Y4F3 1742 aaKnown RBP14.46□□□□□ -0.09
TPM3-210ENST00000368530 CFAP70Q5T0N1 1121 aa14.46□□□□□ -0.1
TPM3-210ENST00000368530 CCDC125Q86Z20 511 aa14.45□□□□□ -0.1
TPM3-210ENST00000368530 RALGAPBQ86X10 1494 aa14.44□□□□□ -0.1
TPM3-210ENST00000368530 GLI3P10071 1580 aa14.44□□□□□ -0.1
TPM3-210ENST00000368530 DCAF8L1A6NGE4 600 aa14.43□□□□□ -0.1
TPM3-210ENST00000368530 PHF8Q9UPP1 1060 aa14.43□□□□□ -0.1
TPM3-210ENST00000368530 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.42□□□□□ -0.1
TPM3-210ENST00000368530 CABLES1Q8TDN4 633 aa14.42□□□□□ -0.1
TPM3-210ENST00000368530 KIF1AQ12756 1690 aa14.42□□□□□ -0.1
TPM3-210ENST00000368530 ONECUT3O60422 494 aaPredicted RBP14.41□□□□□ -0.1
TPM3-210ENST00000368530 PRAM1Q96QH2 718 aa14.41□□□□□ -0.1
TPM3-210ENST00000368530 TNS3Q68CZ2 1445 aa14.41□□□□□ -0.1
TPM3-210ENST00000368530 USP32Q8NFA0 1604 aa14.41□□□□□ -0.1
TPM3-210ENST00000368530 ZRANB1Q9UGI0 708 aa14.41□□□□□ -0.1
TPM3-210ENST00000368530 SBNO1A3KN83 1393 aa14.4□□□□□ -0.1
TPM3-210ENST00000368530 VPS72Q15906 364 aa14.4□□□□□ -0.1
TPM3-210ENST00000368530 CLSPNQ9HAW4 1339 aa14.39□□□□□ -0.11
TPM3-210ENST00000368530 RGPD8O14715 1765 aaPredicted RBP14.39□□□□□ -0.11
TPM3-210ENST00000368530 PSME1Q06323 249 aa14.39□□□□□ -0.11
TPM3-210ENST00000368530 SAFB2Q14151 953 aaKnown RBP eCLIP14.39□□□□□ -0.11
TPM3-210ENST00000368530 ACIN1Q9UKV3 1341 aaKnown RBP14.38□□□□□ -0.11
TPM3-210ENST00000368530 FAM83GA6ND36 823 aa14.38□□□□□ -0.11
TPM3-210ENST00000368530 DLC1Q96QB1 1528 aa14.38□□□□□ -0.11
TPM3-210ENST00000368530 ADGRB1O14514 1584 aa14.38□□□□□ -0.11
TPM3-210ENST00000368530 SEPT12Q8IYM1 358 aa14.37□□□□□ -0.11
TPM3-210ENST00000368530 BLMP54132 1417 aaPredicted RBP14.37□□□□□ -0.11
TPM3-210ENST00000368530 PMFBP1Q8TBY8 1022 aa14.36□□□□□ -0.11
TPM3-210ENST00000368530 ANKARQ7Z5J8 1434 aa14.36□□□□□ -0.11
TPM3-210ENST00000368530 DEFB132Q7Z7B7 95 aa14.36□□□□□ -0.11
TPM3-210ENST00000368530 PRR36Q9H6K5 1346 aa14.35□□□□□ -0.11
TPM3-210ENST00000368530 ARHGEF10O15013 1369 aa14.35□□□□□ -0.11
TPM3-210ENST00000368530 BRWD3Q6RI45 1802 aa14.34□□□□□ -0.11
TPM3-210ENST00000368530 PLEKHG5O94827 1062 aa14.34□□□□□ -0.11
TPM3-210ENST00000368530 POGKQ9P215 609 aa14.34□□□□□ -0.11
TPM3-210ENST00000368530 ADGRB2O60241 1585 aa14.33□□□□□ -0.11
TPM3-210ENST00000368530 ABCA3Q99758 1704 aa14.33□□□□□ -0.12
TPM3-210ENST00000368530 HAP1P54257 671 aaPredicted RBP14.33□□□□□ -0.12
TPM3-210ENST00000368530 HIRIP3Q9BW71 556 aaPredicted RBP14.33□□□□□ -0.12
TPM3-210ENST00000368530 TRAK1Q9UPV9 953 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 8959.1 ms