RNA–Protein interactions for RNA: ENST00000368449.8

SHC1-203, Transcript of SHC adaptor protein 1, humanhuman

TSL 5 BASIC

Gene SHC1, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-203ENST00000368449 EFCAB6Q5THR3 1501 aa16.23■□□□□ 0.19
SHC1-203ENST00000368449 KIF1BO60333 1816 aa16.22■□□□□ 0.19
SHC1-203ENST00000368449 CGNL1Q0VF96 1302 aa16.22■□□□□ 0.19
SHC1-203ENST00000368449 PPRC1Q5VV67 1664 aaKnown RBP16.22■□□□□ 0.19
SHC1-203ENST00000368449 SBNO2Q9Y2G9 1366 aa16.22■□□□□ 0.19
SHC1-203ENST00000368449 SLC24A1O60721 1099 aa16.22■□□□□ 0.19
SHC1-203ENST00000368449 TCP11L2Q8N4U5 519 aa16.21■□□□□ 0.19
SHC1-203ENST00000368449 RLBP1P12271 317 aa16.21■□□□□ 0.19
SHC1-203ENST00000368449 SHPRHQ149N8 1683 aa16.21■□□□□ 0.19
SHC1-203ENST00000368449 FRAT2O75474 233 aaPredicted RBP16.2■□□□□ 0.18
SHC1-203ENST00000368449 CANXP27824 592 aaKnown RBP16.2■□□□□ 0.18
SHC1-203ENST00000368449 NGEFQ8N5V2 710 aa16.2■□□□□ 0.18
SHC1-203ENST00000368449 RARSP54136 660 aaKnown RBP16.2■□□□□ 0.18
SHC1-203ENST00000368449 BCL2L13Q9BXK5 485 aa16.2■□□□□ 0.18
SHC1-203ENST00000368449 MYO3AQ8NEV4 1616 aa16.2■□□□□ 0.18
SHC1-203ENST00000368449 CFAP65Q6ZU64 1925 aaKnown RBP16.19■□□□□ 0.18
SHC1-203ENST00000368449 MTHFSP49914 203 aa16.19■□□□□ 0.18
SHC1-203ENST00000368449 RUNDC1Q96C34 613 aa16.19■□□□□ 0.18
SHC1-203ENST00000368449 PHF23Q9BUL5 403 aaPredicted RBP16.19■□□□□ 0.18
SHC1-203ENST00000368449 C14orf93Q9H972 538 aaKnown RBP16.18■□□□□ 0.18
SHC1-203ENST00000368449 PCDHB15Q9Y5E8 787 aa16.18■□□□□ 0.18
SHC1-203ENST00000368449 KIDINS220Q9ULH0 1771 aa16.18■□□□□ 0.18
SHC1-203ENST00000368449 ADGRB3O60242 1522 aa16.17■□□□□ 0.18
SHC1-203ENST00000368449 IQSEC2Q5JU85 1478 aa16.17■□□□□ 0.18
SHC1-203ENST00000368449 NUTM2DQ5VT03 806 aaPredicted RBP16.16■□□□□ 0.18
SHC1-203ENST00000368449 ADGRB1O14514 1584 aa16.15■□□□□ 0.18
SHC1-203ENST00000368449 NPATQ14207 1427 aa16.15■□□□□ 0.18
SHC1-203ENST00000368449 GGT6Q6P531 493 aa16.15■□□□□ 0.18
SHC1-203ENST00000368449 SETBP1Q9Y6X0 1596 aa16.14■□□□□ 0.17
SHC1-203ENST00000368449 NINLQ9Y2I6 1382 aa16.14■□□□□ 0.17
SHC1-203ENST00000368449 ASXL2Q76L83 1435 aa16.14■□□□□ 0.17
SHC1-203ENST00000368449 ZNF518AQ6AHZ1 1483 aa16.14■□□□□ 0.17
SHC1-203ENST00000368449 LMTK2Q8IWU2 1503 aa16.13■□□□□ 0.17
SHC1-203ENST00000368449 MAPK8IP3Q9UPT6 1336 aa16.13■□□□□ 0.17
SHC1-203ENST00000368449 QRICH2Q9H0J4 1663 aa16.13■□□□□ 0.17
SHC1-203ENST00000368449 NLRP1Q9C000 1473 aa16.12■□□□□ 0.17
SHC1-203ENST00000368449 WDR63Q8IWG1 891 aa16.12■□□□□ 0.17
SHC1-203ENST00000368449 ZC3H13Q5T200 1668 aaKnown RBP16.12■□□□□ 0.17
SHC1-203ENST00000368449 VIRMAQ69YN4 1812 aaKnown RBP16.12■□□□□ 0.17
SHC1-203ENST00000368449 SENP3Q9H4L4 574 aaPredicted RBP16.11■□□□□ 0.17
SHC1-203ENST00000368449 PDZRN3Q9UPQ7 1066 aa16.11■□□□□ 0.17
SHC1-203ENST00000368449 PPLO60437 1756 aa16.1■□□□□ 0.17
SHC1-203ENST00000368449 U2AF1L5P0DN76 240 aaPredicted RBP16.09■□□□□ 0.17
SHC1-203ENST00000368449 U2AF1Q01081 240 aaKnown RBP eCLIP16.09■□□□□ 0.17
SHC1-203ENST00000368449 RSPH6AQ9H0K4 717 aa16.09■□□□□ 0.17
SHC1-203ENST00000368449 SAFB2Q14151 953 aaKnown RBP eCLIP16.09■□□□□ 0.17
SHC1-203ENST00000368449 CABP2Q9NPB3 220 aa16.09■□□□□ 0.17
SHC1-203ENST00000368449 CCDC27Q2M243 656 aa16.09■□□□□ 0.17
SHC1-203ENST00000368449 FRMPD1Q5SYB0 1578 aa16.08■□□□□ 0.17
SHC1-203ENST00000368449 FAM43AQ8N2R8 423 aa16.08■□□□□ 0.16
SHC1-203ENST00000368449 PMFBP1Q8TBY8 1022 aa16.08■□□□□ 0.16
SHC1-203ENST00000368449 TSR2Q969E8 191 aaKnown RBP16.08■□□□□ 0.16
SHC1-203ENST00000368449 CFAP53Q96M91 514 aa16.07■□□□□ 0.16
SHC1-203ENST00000368449 SLKQ9H2G2 1235 aaPredicted RBP16.07■□□□□ 0.16
SHC1-203ENST00000368449 TULP4Q9NRJ4 1543 aa16.07■□□□□ 0.16
SHC1-203ENST00000368449 USP32Q8NFA0 1604 aa16.05■□□□□ 0.16
SHC1-203ENST00000368449 ANKRD36BQ8N2N9 1353 aa16.05■□□□□ 0.16
SHC1-203ENST00000368449 EVC2Q86UK5 1308 aa16.05■□□□□ 0.16
SHC1-203ENST00000368449 MVPQ14764 893 aaKnown RBP16.04■□□□□ 0.16
SHC1-203ENST00000368449 MYH16Q9H6N6 1097 aa16.04■□□□□ 0.16
SHC1-203ENST00000368449 RPGRIP1LQ68CZ1 1315 aa16.04■□□□□ 0.16
SHC1-203ENST00000368449 GLI2P10070 1586 aa16.04■□□□□ 0.16
SHC1-203ENST00000368449 OSCARQ8IYS5 282 aa16.04■□□□□ 0.16
SHC1-203ENST00000368449 TBC1D32Q96NH3 1257 aa16.04■□□□□ 0.16
SHC1-203ENST00000368449 POGKQ9P215 609 aa16.03■□□□□ 0.16
SHC1-203ENST00000368449 GGNBP2Q9H3C7 697 aa16.03■□□□□ 0.16
SHC1-203ENST00000368449 RWDD1Q9H446 243 aaPredicted RBP16.03■□□□□ 0.16
SHC1-203ENST00000368449 ANTXR1Q9H6X2 564 aa16.03■□□□□ 0.16
SHC1-203ENST00000368449 EXOSC9Q06265 439 aaKnown RBP16.02■□□□□ 0.16
SHC1-203ENST00000368449 AAMPQ13685 434 aa16.02■□□□□ 0.16
SHC1-203ENST00000368449 CD109Q6YHK3 1445 aa16.02■□□□□ 0.16
SHC1-203ENST00000368449 POGZQ7Z3K3 1410 aa16.02■□□□□ 0.16
SHC1-203ENST00000368449 PLEKHF1Q96S99 279 aa16.02■□□□□ 0.15
SHC1-203ENST00000368449 STK26Q9P289 416 aa16.02■□□□□ 0.15
SHC1-203ENST00000368449 ABCC3O15438 1527 aa16.02■□□□□ 0.15
SHC1-203ENST00000368449 SIGLEC1Q9BZZ2 1709 aa16.02■□□□□ 0.15
SHC1-203ENST00000368449 ZKSCAN2Q63HK3 967 aa16.01■□□□□ 0.15
SHC1-203ENST00000368449 TBC1D2Q9BYX2 928 aa16.01■□□□□ 0.15
SHC1-203ENST00000368449 TRIM35Q9UPQ4 493 aa16.01■□□□□ 0.15
SHC1-203ENST00000368449 U2SURPO15042 1029 aaKnown RBP16.01■□□□□ 0.15
SHC1-203ENST00000368449 BECN1Q14457 450 aa16.01■□□□□ 0.15
SHC1-203ENST00000368449 DZIP1LQ8IYY4 767 aaKnown RBP16.01■□□□□ 0.15
SHC1-203ENST00000368449 ARHGEF28Q8N1W1 1705 aaKnown RBP16.01■□□□□ 0.15
SHC1-203ENST00000368449 A0A1W2PP64 1363 aa16■□□□□ 0.15
SHC1-203ENST00000368449 ADGRB2O60241 1585 aa16■□□□□ 0.15
SHC1-203ENST00000368449 TRIM27P14373 513 aa16■□□□□ 0.15
SHC1-203ENST00000368449 SSH1Q8WYL5 1049 aa16■□□□□ 0.15
SHC1-203ENST00000368449 HECW2Q9P2P5 1572 aa16■□□□□ 0.15
SHC1-203ENST00000368449 TMPOP42166 694 aaKnown RBP16■□□□□ 0.15
SHC1-203ENST00000368449 MLH3Q9UHC1 1453 aa15.99■□□□□ 0.15
SHC1-203ENST00000368449 VGFO15240 615 aaPredicted RBP15.99■□□□□ 0.15
SHC1-203ENST00000368449 RAPGEF3O95398 923 aa15.99■□□□□ 0.15
SHC1-203ENST00000368449 FTSJ3Q8IY81 847 aaKnown RBP15.99■□□□□ 0.15
SHC1-203ENST00000368449 PUS7Q96PZ0 661 aaKnown RBP15.99■□□□□ 0.15
SHC1-203ENST00000368449 RRAGDQ9NQL2 400 aaPredicted RBP15.99■□□□□ 0.15
SHC1-203ENST00000368449 SMC4Q9NTJ3 1288 aa15.99■□□□□ 0.15
SHC1-203ENST00000368449 NSD2O96028 1365 aa15.98■□□□□ 0.15
SHC1-203ENST00000368449 NEXMIFQ5QGS0 1516 aa15.98■□□□□ 0.15
SHC1-203ENST00000368449 IDI1Q13907 227 aa15.98■□□□□ 0.15
SHC1-203ENST00000368449 CAMSAP1Q5T5Y3 1602 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms