RNA–Protein interactions for RNA: ENST00000368273.8

PMF1-201, Transcript of polyamine modulated factor 1, humanhuman

TSL 2 BASIC

Gene PMF1, Length 884 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-201ENST00000368273 MST1RQ04912 1400 aa18.75■□□□□ 0.59
PMF1-201ENST00000368273 PLEKHH1Q9ULM0 1364 aa18.75■□□□□ 0.59
PMF1-201ENST00000368273 KIAA1210Q9ULL0 1709 aa18.74■□□□□ 0.59
PMF1-201ENST00000368273 DLC1Q96QB1 1528 aa18.74■□□□□ 0.59
PMF1-201ENST00000368273 CDC42BPGQ6DT37 1551 aa18.72■□□□□ 0.59
PMF1-201ENST00000368273 NBPF8Q3BBV2 869 aa18.71■□□□□ 0.59
PMF1-201ENST00000368273 BRINP3Q76B58 766 aa18.71■□□□□ 0.59
PMF1-201ENST00000368273 PRAM1Q96QH2 718 aa18.71■□□□□ 0.59
PMF1-201ENST00000368273 TRAK1Q9UPV9 953 aa18.71■□□□□ 0.59
PMF1-201ENST00000368273 C1orf167Q5SNV9 1468 aa18.7■□□□□ 0.58
PMF1-201ENST00000368273 POGKQ9P215 609 aa18.69■□□□□ 0.58
PMF1-201ENST00000368273 NBPF1Q3BBV0 1214 aa18.68■□□□□ 0.58
PMF1-201ENST00000368273 PHLPP1O60346 1717 aa18.68■□□□□ 0.58
PMF1-201ENST00000368273 SAFB2Q14151 953 aaKnown RBP eCLIP18.67■□□□□ 0.58
PMF1-201ENST00000368273 AHDC1Q5TGY3 1603 aaPredicted RBP18.67■□□□□ 0.58
PMF1-201ENST00000368273 COL16A1Q07092 1604 aaPredicted RBP18.64■□□□□ 0.57
PMF1-201ENST00000368273 ARHGEF28Q8N1W1 1705 aaKnown RBP18.64■□□□□ 0.57
PMF1-201ENST00000368273 ORAI2Q96SN7 254 aa18.64■□□□□ 0.57
PMF1-201ENST00000368273 TRPM1Q7Z4N2 1603 aa18.63■□□□□ 0.57
PMF1-201ENST00000368273 FMN2Q9NZ56 1722 aa18.63■□□□□ 0.57
PMF1-201ENST00000368273 NHSL1Q5SYE7 1610 aa18.63■□□□□ 0.57
PMF1-201ENST00000368273 ADGRB2O60241 1585 aa18.62■□□□□ 0.57
PMF1-201ENST00000368273 RALGAPBQ86X10 1494 aa18.61■□□□□ 0.57
PMF1-201ENST00000368273 NUTM2FA1L443 756 aa18.61■□□□□ 0.57
PMF1-201ENST00000368273 MINK1Q8N4C8 1332 aaPredicted RBP18.6■□□□□ 0.57
PMF1-201ENST00000368273 ESCO1Q5FWF5 840 aa18.6■□□□□ 0.57
PMF1-201ENST00000368273 JCADQ9P266 1359 aa18.59■□□□□ 0.57
PMF1-201ENST00000368273 DDX17Q92841 729 aaKnown RBP18.59■□□□□ 0.57
PMF1-201ENST00000368273 HIRIP3Q9BW71 556 aaPredicted RBP18.59■□□□□ 0.57
PMF1-201ENST00000368273 MED1Q15648 1581 aaPredicted RBP18.58■□□□□ 0.56
PMF1-201ENST00000368273 ROCK2O75116 1388 aaKnown RBP18.57■□□□□ 0.56
PMF1-201ENST00000368273 DISP3Q9P2K9 1392 aa18.56■□□□□ 0.56
PMF1-201ENST00000368273 WASLO00401 505 aaPredicted RBP18.56■□□□□ 0.56
PMF1-201ENST00000368273 EIF4G2P78344 907 aaKnown RBP eCLIP18.56■□□□□ 0.56
PMF1-201ENST00000368273 ANKARQ7Z5J8 1434 aa18.56■□□□□ 0.56
PMF1-201ENST00000368273 SOS2Q07890 1332 aaPredicted RBP18.55■□□□□ 0.56
PMF1-201ENST00000368273 HSPA5P11021 654 aaKnown RBP18.55■□□□□ 0.56
PMF1-201ENST00000368273 LRRC59Q96AG4 307 aaKnown RBP18.55■□□□□ 0.56
PMF1-201ENST00000368273 RGPD8O14715 1765 aaPredicted RBP18.55■□□□□ 0.56
PMF1-201ENST00000368273 EIF3AQ14152 1382 aaKnown RBP18.55■□□□□ 0.56
PMF1-201ENST00000368273 GPRASP1Q5JY77 1395 aa18.55■□□□□ 0.56
PMF1-201ENST00000368273 NPHP3Q7Z494 1330 aa18.54■□□□□ 0.56
PMF1-201ENST00000368273 CENPJQ9HC77 1338 aaPredicted RBP18.54■□□□□ 0.56
PMF1-201ENST00000368273 KIF1AQ12756 1690 aa18.54■□□□□ 0.56
PMF1-201ENST00000368273 SHPRHQ149N8 1683 aa18.54■□□□□ 0.56
PMF1-201ENST00000368273 USP32Q8NFA0 1604 aa18.53■□□□□ 0.56
PMF1-201ENST00000368273 FOXO3O43524 673 aa18.53■□□□□ 0.56
PMF1-201ENST00000368273 TULP4Q9NRJ4 1543 aa18.53■□□□□ 0.56
PMF1-201ENST00000368273 DIEXFQ68CQ4 756 aaKnown RBP18.52■□□□□ 0.56
PMF1-201ENST00000368273 PHF8Q9UPP1 1060 aa18.52■□□□□ 0.56
PMF1-201ENST00000368273 SPATA31A6Q5VVP1 1343 aa18.5■□□□□ 0.55
PMF1-201ENST00000368273 PRR36Q9H6K5 1346 aa18.5■□□□□ 0.55
PMF1-201ENST00000368273 CARD11Q9BXL7 1154 aa18.5■□□□□ 0.55
PMF1-201ENST00000368273 PXDNQ92626 1479 aa18.5■□□□□ 0.55
PMF1-201ENST00000368273 QRICH2Q9H0J4 1663 aa18.5■□□□□ 0.55
PMF1-201ENST00000368273 CDK19Q9BWU1 502 aa18.49■□□□□ 0.55
PMF1-201ENST00000368273 USP47Q96K76 1375 aa18.49■□□□□ 0.55
PMF1-201ENST00000368273 PNPLA6Q8IY17 1366 aa18.48■□□□□ 0.55
PMF1-201ENST00000368273 XPCQ01831 940 aaPredicted RBP18.47■□□□□ 0.55
PMF1-201ENST00000368273 NUDT16Q96DE0 195 aaKnown RBP18.47■□□□□ 0.55
PMF1-201ENST00000368273 ATP7BP35670 1465 aa18.46■□□□□ 0.55
PMF1-201ENST00000368273 KRT28Q7Z3Y7 464 aa18.46■□□□□ 0.55
PMF1-201ENST00000368273 PMFBP1Q8TBY8 1022 aa18.46■□□□□ 0.55
PMF1-201ENST00000368273 PHF23Q9BUL5 403 aaPredicted RBP18.45■□□□□ 0.54
PMF1-201ENST00000368273 LRP6O75581 1613 aa18.45■□□□□ 0.54
PMF1-201ENST00000368273 ITSN1Q15811 1721 aa18.44■□□□□ 0.54
PMF1-201ENST00000368273 PSME1Q06323 249 aa18.43■□□□□ 0.54
PMF1-201ENST00000368273 NUTM2BA6NNL0 878 aaPredicted RBP18.42■□□□□ 0.54
PMF1-201ENST00000368273 NUTM2EB1AL46 878 aaPredicted RBP18.42■□□□□ 0.54
PMF1-201ENST00000368273 SRPK2P78362 688 aaKnown RBP18.42■□□□□ 0.54
PMF1-201ENST00000368273 NUTM2AQ8IVF1 878 aaPredicted RBP18.42■□□□□ 0.54
PMF1-201ENST00000368273 CCDC61Q9Y6R9 512 aa18.42■□□□□ 0.54
PMF1-201ENST00000368273 SPATA31A3Q5VYP0 1347 aa18.42■□□□□ 0.54
PMF1-201ENST00000368273 EVC2Q86UK5 1308 aa18.42■□□□□ 0.54
PMF1-201ENST00000368273 COL22A1Q8NFW1 1626 aaPredicted RBP18.41■□□□□ 0.54
PMF1-201ENST00000368273 TOPAZ1Q8N9V7 1692 aa18.41■□□□□ 0.54
PMF1-201ENST00000368273 CABP2Q9NPB3 220 aa18.41■□□□□ 0.54
PMF1-201ENST00000368273 SBNO1A3KN83 1393 aa18.41■□□□□ 0.54
PMF1-201ENST00000368273 SBNO2Q9Y2G9 1366 aa18.41■□□□□ 0.54
PMF1-201ENST00000368273 MEX3CQ5U5Q3 659 aaKnown RBP18.4■□□□□ 0.54
PMF1-201ENST00000368273 NGDNQ8NEJ9 315 aaKnown RBP18.4■□□□□ 0.54
PMF1-201ENST00000368273 PLEKHG3A1L390 1219 aa18.39■□□□□ 0.53
PMF1-201ENST00000368273 RGS17Q9UGC6 210 aaPredicted RBP18.39■□□□□ 0.53
PMF1-201ENST00000368273 TNS3Q68CZ2 1445 aa18.39■□□□□ 0.53
PMF1-201ENST00000368273 POLR3AO14802 1390 aaPredicted RBP18.37■□□□□ 0.53
PMF1-201ENST00000368273 TRPM3Q9HCF6 1732 aaPredicted RBP18.37■□□□□ 0.53
PMF1-201ENST00000368273 ST20-MTHFSA0A0A6YYL1 179 aa18.36■□□□□ 0.53
PMF1-201ENST00000368273 ACEP12821 1306 aa18.36■□□□□ 0.53
PMF1-201ENST00000368273 WASHC2AQ641Q2 1341 aa18.36■□□□□ 0.53
PMF1-201ENST00000368273 PPIP5K1Q6PFW1 1433 aa18.36■□□□□ 0.53
PMF1-201ENST00000368273 ILDR2Q71H61 639 aa18.36■□□□□ 0.53
PMF1-201ENST00000368273 CCDC7Q96M83 1385 aa18.36■□□□□ 0.53
PMF1-201ENST00000368273 ARHGEF10O15013 1369 aa18.34■□□□□ 0.53
PMF1-201ENST00000368273 C11orf95C9JLR9 678 aaPredicted RBP18.34■□□□□ 0.53
PMF1-201ENST00000368273 DDX10Q13206 875 aaKnown RBP18.34■□□□□ 0.53
PMF1-201ENST00000368273 ADAMTS2O95450 1211 aa18.33■□□□□ 0.52
PMF1-201ENST00000368273 LMOD2Q6P5Q4 547 aa18.33■□□□□ 0.52
PMF1-201ENST00000368273 CABP1Q9NZU7 370 aa18.33■□□□□ 0.52
PMF1-201ENST00000368273 ALS2Q96Q42 1657 aa18.32■□□□□ 0.52
PMF1-201ENST00000368273 KIF7Q2M1P5 1343 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms