RNA–Protein interactions for RNA: ENST00000368210.7

PTPRK-204, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRK, Length 5,025 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-204ENST00000368210 C11orf95C9JLR9 678 aaPredicted RBP16.28■□□□□ 0.2
PTPRK-204ENST00000368210 TSPYL4Q9UJ04 414 aa16.28■□□□□ 0.2
PTPRK-204ENST00000368210 NCOA1Q15788 1441 aa16.28■□□□□ 0.2
PTPRK-204ENST00000368210 LNPKQ9C0E8 428 aa16.28■□□□□ 0.2
PTPRK-204ENST00000368210 CCDC9Q9Y3X0 531 aaKnown RBP16.28■□□□□ 0.2
PTPRK-204ENST00000368210 DDX11L8A8MPP1 907 aa16.27■□□□□ 0.2
PTPRK-204ENST00000368210 CSPP1Q1MSJ5 1256 aa16.27■□□□□ 0.2
PTPRK-204ENST00000368210 C9orf78Q9NZ63 289 aaPredicted RBP16.27■□□□□ 0.19
PTPRK-204ENST00000368210 PRKAR2BP31323 418 aa16.26■□□□□ 0.19
PTPRK-204ENST00000368210 NEXNQ0ZGT2 675 aa16.26■□□□□ 0.19
PTPRK-204ENST00000368210 REC8O95072 547 aa16.26■□□□□ 0.19
PTPRK-204ENST00000368210 HSP90B1P14625 803 aaKnown RBP16.26■□□□□ 0.19
PTPRK-204ENST00000368210 NLRP6P59044 892 aa16.26■□□□□ 0.19
PTPRK-204ENST00000368210 RPGRIP1LQ68CZ1 1315 aa16.26■□□□□ 0.19
PTPRK-204ENST00000368210 EXOSC9Q06265 439 aaKnown RBP16.25■□□□□ 0.19
PTPRK-204ENST00000368210 TXNDC2Q86VQ3 553 aa16.25■□□□□ 0.19
PTPRK-204ENST00000368210 SMG6Q86US8 1419 aaKnown RBP16.25■□□□□ 0.19
PTPRK-204ENST00000368210 PDE3AQ14432 1141 aa16.24■□□□□ 0.19
PTPRK-204ENST00000368210 TTC5Q8N0Z6 440 aa16.24■□□□□ 0.19
PTPRK-204ENST00000368210 CABP1Q9NZU7 370 aa16.24■□□□□ 0.19
PTPRK-204ENST00000368210 ZNF608Q9ULD9 1512 aaPredicted RBP16.24■□□□□ 0.19
PTPRK-204ENST00000368210 GOLGA6L1Q8N7Z2 621 aa16.23■□□□□ 0.19
PTPRK-204ENST00000368210 NFKBIBQ15653 356 aa16.23■□□□□ 0.19
PTPRK-204ENST00000368210 FOXD4L5Q5VV16 416 aaPredicted RBP16.23■□□□□ 0.19
PTPRK-204ENST00000368210 FOXD4L4Q8WXT5 416 aaPredicted RBP16.23■□□□□ 0.19
PTPRK-204ENST00000368210 CDK19Q9BWU1 502 aa16.23■□□□□ 0.19
PTPRK-204ENST00000368210 NUTM2GQ5VZR2 741 aa16.23■□□□□ 0.19
PTPRK-204ENST00000368210 BCAR3O75815 825 aa16.22■□□□□ 0.19
PTPRK-204ENST00000368210 DIAPH3Q9NSV4 1193 aa16.22■□□□□ 0.19
PTPRK-204ENST00000368210 CCDC66A2RUB6 948 aa16.21■□□□□ 0.19
PTPRK-204ENST00000368210 TULP1O00294 542 aaPredicted RBP16.21■□□□□ 0.19
PTPRK-204ENST00000368210 DDX58O95786 925 aaKnown RBP16.21■□□□□ 0.18
PTPRK-204ENST00000368210 KIF14Q15058 1648 aa16.21■□□□□ 0.18
PTPRK-204ENST00000368210 DDX49Q9Y6V7 483 aaKnown RBP16.2■□□□□ 0.18
PTPRK-204ENST00000368210 RPRD2Q5VT52 1461 aaKnown RBP16.2■□□□□ 0.18
PTPRK-204ENST00000368210 EVA1CP58658 441 aa16.2■□□□□ 0.18
PTPRK-204ENST00000368210 SKOR2Q2VWA4 1001 aaPredicted RBP16.2■□□□□ 0.18
PTPRK-204ENST00000368210 SETQ01105 290 aaPredicted RBP16.2■□□□□ 0.18
PTPRK-204ENST00000368210 TSR2Q969E8 191 aaKnown RBP16.2■□□□□ 0.18
PTPRK-204ENST00000368210 CALRP27797 417 aaKnown RBP16.2■□□□□ 0.18
PTPRK-204ENST00000368210 ISY1Q9ULR0 285 aaKnown RBP16.2■□□□□ 0.18
PTPRK-204ENST00000368210 C22orf23Q9BZE7 217 aa16.19■□□□□ 0.18
PTPRK-204ENST00000368210 RUFY2Q8WXA3 655 aa16.19■□□□□ 0.18
PTPRK-204ENST00000368210 WDR63Q8IWG1 891 aa16.19■□□□□ 0.18
PTPRK-204ENST00000368210 KIF3AQ9Y496 699 aa16.19■□□□□ 0.18
PTPRK-204ENST00000368210 RAPGEF4Q8WZA2 1011 aa16.18■□□□□ 0.18
PTPRK-204ENST00000368210 CHMP5Q9NZZ3 219 aa16.18■□□□□ 0.18
PTPRK-204ENST00000368210 IFIT2P09913 472 aaKnown RBP16.18■□□□□ 0.18
PTPRK-204ENST00000368210 ZNF692Q9BU19 519 aaPredicted RBP16.18■□□□□ 0.18
PTPRK-204ENST00000368210 GTF2E1P29083 439 aaPredicted RBP16.17■□□□□ 0.18
PTPRK-204ENST00000368210 INTS3Q68E01 1043 aaKnown RBP16.17■□□□□ 0.18
PTPRK-204ENST00000368210 TWISTNBQ3B726 338 aaPredicted RBP16.17■□□□□ 0.18
PTPRK-204ENST00000368210 ABTB2Q8N961 1025 aa16.17■□□□□ 0.18
PTPRK-204ENST00000368210 ANO2Q9NQ90 1003 aa16.17■□□□□ 0.18
PTPRK-204ENST00000368210 ATAD2Q6PL18 1390 aa16.17■□□□□ 0.18
PTPRK-204ENST00000368210 GAS2L2Q8NHY3 880 aa16.17■□□□□ 0.18
PTPRK-204ENST00000368210 PHF14O94880 888 aa16.16■□□□□ 0.18
PTPRK-204ENST00000368210 TAF3Q5VWG9 929 aa16.16■□□□□ 0.18
PTPRK-204ENST00000368210 MRE11P49959 708 aa16.16■□□□□ 0.18
PTPRK-204ENST00000368210 PDZRN3Q9UPQ7 1066 aa16.16■□□□□ 0.18
PTPRK-204ENST00000368210 ZKSCAN1P17029 563 aaPredicted RBP16.15■□□□□ 0.18
PTPRK-204ENST00000368210 HSP90AB4PQ58FF6 505 aa16.15■□□□□ 0.18
PTPRK-204ENST00000368210 ATP6V1DQ9Y5K8 247 aa16.15■□□□□ 0.18
PTPRK-204ENST00000368210 THOC2Q8NI27 1593 aaKnown RBP16.15■□□□□ 0.18
PTPRK-204ENST00000368210 RTEL1-TNFRSF6BF6WH68 1400 aa16.15■□□□□ 0.18
PTPRK-204ENST00000368210 ATF3P18847 181 aa16.14■□□□□ 0.18
PTPRK-204ENST00000368210 G3BP1Q13283 466 aaKnown RBP eCLIP16.14■□□□□ 0.181e-7■■■■□ 21.6
PTPRK-204ENST00000368210 SULT6B1Q6IMI4 303 aa16.14■□□□□ 0.18
PTPRK-204ENST00000368210 TOMM22Q9NS69 142 aa16.14■□□□□ 0.18
PTPRK-204ENST00000368210 CT47B1P0C2W7 299 aaPredicted RBP16.14■□□□□ 0.17
PTPRK-204ENST00000368210 NLRP2Q9NX02 1062 aa16.14■□□□□ 0.17
PTPRK-204ENST00000368210 FOXD4L6Q3SYB3 417 aaPredicted RBP16.14■□□□□ 0.17
PTPRK-204ENST00000368210 FOXD4L3Q6VB84 417 aaPredicted RBP16.14■□□□□ 0.17
PTPRK-204ENST00000368210 PTPRKQ15262 1439 aa16.14■□□□□ 0.17
PTPRK-204ENST00000368210 NSD3Q9BZ95 1437 aa16.14■□□□□ 0.17
PTPRK-204ENST00000368210 THEMISQ8N1K5 641 aaPredicted RBP16.13■□□□□ 0.17
PTPRK-204ENST00000368210 NOB1Q9ULX3 412 aaKnown RBP16.13■□□□□ 0.17
PTPRK-204ENST00000368210 UBTFL1P0CB47 393 aaPredicted RBP16.13■□□□□ 0.17
PTPRK-204ENST00000368210 CD109Q6YHK3 1445 aa16.13■□□□□ 0.17
PTPRK-204ENST00000368210 FRAT2O75474 233 aaPredicted RBP16.13■□□□□ 0.17
PTPRK-204ENST00000368210 GPATCH8Q9UKJ3 1502 aaKnown RBP16.13■□□□□ 0.17
PTPRK-204ENST00000368210 GPRASP1Q5JY77 1395 aa16.12■□□□□ 0.17
PTPRK-204ENST00000368210 CDC45O75419 566 aa16.12■□□□□ 0.17
PTPRK-204ENST00000368210 ADGRL1O94910 1474 aa16.12■□□□□ 0.17
PTPRK-204ENST00000368210 GNAI3P08754 354 aa16.12■□□□□ 0.17
PTPRK-204ENST00000368210 SLFN5Q08AF3 891 aa16.12■□□□□ 0.17
PTPRK-204ENST00000368210 CCDC30Q5VVM6 783 aa16.12■□□□□ 0.17
PTPRK-204ENST00000368210 CCDC34Q96HJ3 373 aa16.11■□□□□ 0.17
PTPRK-204ENST00000368210 WWC1Q8IX03 1113 aa16.11■□□□□ 0.17
PTPRK-204ENST00000368210 NINLQ9Y2I6 1382 aa16.11■□□□□ 0.17
PTPRK-204ENST00000368210 H3BQV1 296 aa16.11■□□□□ 0.17
PTPRK-204ENST00000368210 LRRFIP1Q32MZ4 808 aaKnown RBP16.11■□□□□ 0.17
PTPRK-204ENST00000368210 IFFO2Q5TF58 517 aa16.11■□□□□ 0.17
PTPRK-204ENST00000368210 ATF7IPQ6VMQ6 1270 aa16.11■□□□□ 0.17
PTPRK-204ENST00000368210 FAM184AQ8NB25 1140 aa16.11■□□□□ 0.17
PTPRK-204ENST00000368210 SLC26A8Q96RN1 970 aa16.11■□□□□ 0.17
PTPRK-204ENST00000368210 BACH2Q9BYV9 841 aa16.11■□□□□ 0.17
PTPRK-204ENST00000368210 SF3A1Q15459 793 aaKnown RBP16.1■□□□□ 0.17
PTPRK-204ENST00000368210 ESCO1Q5FWF5 840 aa16.1■□□□□ 0.17
PTPRK-204ENST00000368210 TEX35Q5T0J7 233 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms