RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 NRDCO43847 1150 aa14.39□□□□□ -0.11
COPA-202ENST00000368069 FOXD4L6Q3SYB3 417 aaPredicted RBP14.39□□□□□ -0.11
COPA-202ENST00000368069 FOXD4L3Q6VB84 417 aaPredicted RBP14.39□□□□□ -0.11
COPA-202ENST00000368069 RAPGEF6Q8TEU7 1601 aa14.39□□□□□ -0.11
COPA-202ENST00000368069 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.39□□□□□ -0.11
COPA-202ENST00000368069 FAM69CQ0P6D2 419 aa14.38□□□□□ -0.11
COPA-202ENST00000368069 MVPQ14764 893 aaKnown RBP14.38□□□□□ -0.11
COPA-202ENST00000368069 CHMP3Q9Y3E7 222 aa14.38□□□□□ -0.11
COPA-202ENST00000368069 RALGAPBQ86X10 1494 aa14.38□□□□□ -0.11
COPA-202ENST00000368069 FKBP5Q13451 457 aaPredicted RBP14.38□□□□□ -0.11
COPA-202ENST00000368069 INTS3Q68E01 1043 aaKnown RBP14.38□□□□□ -0.11
COPA-202ENST00000368069 ZNF330Q9Y3S2 320 aaPredicted RBP14.38□□□□□ -0.11
COPA-202ENST00000368069 RSPH6AQ9H0K4 717 aa14.37□□□□□ -0.11
COPA-202ENST00000368069 C1orf115Q9H7X2 142 aa14.37□□□□□ -0.11
COPA-202ENST00000368069 CDC45O75419 566 aa14.37□□□□□ -0.11
COPA-202ENST00000368069 TSPYL4Q9UJ04 414 aa14.37□□□□□ -0.11
COPA-202ENST00000368069 EIF2S2P20042 333 aaKnown RBP14.37□□□□□ -0.11
COPA-202ENST00000368069 BRPF3Q9ULD4 1205 aa14.37□□□□□ -0.11
COPA-202ENST00000368069 CABP1Q9NZU7 370 aa14.36□□□□□ -0.11
COPA-202ENST00000368069 PHF14O94880 888 aa14.36□□□□□ -0.11
COPA-202ENST00000368069 HSP90B1P14625 803 aaKnown RBP14.36□□□□□ -0.11
COPA-202ENST00000368069 ATF7IPQ6VMQ6 1270 aa14.36□□□□□ -0.11
COPA-202ENST00000368069 CSPP1Q1MSJ5 1256 aa14.35□□□□□ -0.11
COPA-202ENST00000368069 HTATSF1O43719 755 aaKnown RBP14.35□□□□□ -0.11
COPA-202ENST00000368069 CT47B1P0C2W7 299 aaPredicted RBP14.35□□□□□ -0.11
COPA-202ENST00000368069 TEFQ10587 303 aa14.35□□□□□ -0.11
COPA-202ENST00000368069 DUSP27Q5VZP5 1158 aa14.35□□□□□ -0.11
COPA-202ENST00000368069 CDK19Q9BWU1 502 aa14.35□□□□□ -0.11
COPA-202ENST00000368069 ARID3AQ99856 593 aa14.35□□□□□ -0.11
COPA-202ENST00000368069 TWISTNBQ3B726 338 aaPredicted RBP14.35□□□□□ -0.11
COPA-202ENST00000368069 ANO2Q9NQ90 1003 aa14.35□□□□□ -0.11
COPA-202ENST00000368069 RPGRIP1LQ68CZ1 1315 aa14.34□□□□□ -0.11
COPA-202ENST00000368069 IL27Q8NEV9 243 aa14.34□□□□□ -0.11
COPA-202ENST00000368069 ADGRF5Q8IZF2 1346 aa14.33□□□□□ -0.11
COPA-202ENST00000368069 NKTRP30414 1462 aaKnown RBP14.33□□□□□ -0.11
COPA-202ENST00000368069 RAPGEF3O95398 923 aa14.33□□□□□ -0.12
COPA-202ENST00000368069 GNL2Q13823 731 aaKnown RBP14.33□□□□□ -0.12
COPA-202ENST00000368069 WDR62O43379 1518 aa14.33□□□□□ -0.12
COPA-202ENST00000368069 DIAPH3Q9NSV4 1193 aa14.33□□□□□ -0.12
COPA-202ENST00000368069 SLC52A1Q9NWF4 448 aa14.33□□□□□ -0.12
COPA-202ENST00000368069 TRAK2O60296 914 aa14.32□□□□□ -0.12
COPA-202ENST00000368069 NUCB2P80303 420 aa14.32□□□□□ -0.12
COPA-202ENST00000368069 C1orf141Q5JVX7 400 aa14.32□□□□□ -0.12
COPA-202ENST00000368069 GORABQ5T7V8 394 aa14.32□□□□□ -0.12
COPA-202ENST00000368069 SCAF11Q99590 1463 aaKnown RBP14.32□□□□□ -0.12
COPA-202ENST00000368069 GCC1Q96CN9 775 aa14.32□□□□□ -0.12
COPA-202ENST00000368069 RARSP54136 660 aaKnown RBP14.31□□□□□ -0.12
COPA-202ENST00000368069 MCTP1Q6DN14 999 aa14.31□□□□□ -0.12
COPA-202ENST00000368069 ITSN2Q9NZM3 1697 aa14.31□□□□□ -0.12
COPA-202ENST00000368069 ATP10BO94823 1461 aa14.31□□□□□ -0.12
COPA-202ENST00000368069 C9orf78Q9NZ63 289 aaPredicted RBP14.3□□□□□ -0.12
COPA-202ENST00000368069 TMPOP42166 694 aaKnown RBP14.3□□□□□ -0.12
COPA-202ENST00000368069 FAM135AQ9P2D6 1515 aa14.3□□□□□ -0.12
COPA-202ENST00000368069 TXNDC2Q86VQ3 553 aa14.3□□□□□ -0.12
COPA-202ENST00000368069 LRPPRCP42704 1394 aaKnown RBP14.3□□□□□ -0.12
COPA-202ENST00000368069 ATAD2Q6PL18 1390 aa14.3□□□□□ -0.12
COPA-202ENST00000368069 ATP6V1DQ9Y5K8 247 aa14.29□□□□□ -0.12
COPA-202ENST00000368069 MRE11P49959 708 aa14.29□□□□□ -0.12
COPA-202ENST00000368069 PRAG1Q86YV5 1406 aa14.29□□□□□ -0.12
COPA-202ENST00000368069 PARD3Q8TEW0 1356 aa14.28□□□□□ -0.12
COPA-202ENST00000368069 NPHP1O15259 732 aa14.28□□□□□ -0.12
COPA-202ENST00000368069 ADAMTS12P58397 1594 aa14.28□□□□□ -0.12
COPA-202ENST00000368069 CCDC9Q9Y3X0 531 aaKnown RBP14.28□□□□□ -0.12
COPA-202ENST00000368069 KIAA0556O60303 1618 aa14.28□□□□□ -0.12
COPA-202ENST00000368069 TAF7LQ5H9L4 462 aa14.28□□□□□ -0.12
COPA-202ENST00000368069 NUTM2GQ5VZR2 741 aa14.28□□□□□ -0.12
COPA-202ENST00000368069 TMEM57Q8N5G2 664 aa14.28□□□□□ -0.12
COPA-202ENST00000368069 RUFY2Q8WXA3 655 aa14.28□□□□□ -0.12
COPA-202ENST00000368069 DHX29Q7Z478 1369 aaKnown RBP14.28□□□□□ -0.12
COPA-202ENST00000368069 CDK11BP21127 795 aaKnown RBP14.27□□□□□ -0.12
COPA-202ENST00000368069 CHD1LQ86WJ1 897 aa14.27□□□□□ -0.13
COPA-202ENST00000368069 SULT6B1Q6IMI4 303 aa14.27□□□□□ -0.13
COPA-202ENST00000368069 ADGRL1O94910 1474 aa14.27□□□□□ -0.13
COPA-202ENST00000368069 IFIT2P09913 472 aaKnown RBP14.26□□□□□ -0.13
COPA-202ENST00000368069 FCHSD2O94868 740 aa14.26□□□□□ -0.13
COPA-202ENST00000368069 PZPP20742 1482 aa14.26□□□□□ -0.13
COPA-202ENST00000368069 RTEL1-TNFRSF6BF6WH68 1400 aa14.26□□□□□ -0.13
COPA-202ENST00000368069 NLRP6P59044 892 aa14.26□□□□□ -0.13
COPA-202ENST00000368069 ZKSCAN1P17029 563 aaPredicted RBP14.25□□□□□ -0.13
COPA-202ENST00000368069 HSP90AA2PQ14568 343 aaPredicted RBP14.25□□□□□ -0.13
COPA-202ENST00000368069 SSH1Q8WYL5 1049 aa14.25□□□□□ -0.13
COPA-202ENST00000368069 UBTFL1P0CB47 393 aaPredicted RBP14.25□□□□□ -0.13
COPA-202ENST00000368069 NEXNQ0ZGT2 675 aa14.25□□□□□ -0.13
COPA-202ENST00000368069 RABEP1Q15276 862 aa14.24□□□□□ -0.13
COPA-202ENST00000368069 AMER1Q5JTC6 1135 aaPredicted RBP14.24□□□□□ -0.13
COPA-202ENST00000368069 H3BQV1 296 aa14.24□□□□□ -0.13
COPA-202ENST00000368069 RRS1Q15050 365 aaKnown RBP14.24□□□□□ -0.13
COPA-202ENST00000368069 IFFO2Q5TF58 517 aa14.24□□□□□ -0.13
COPA-202ENST00000368069 NOS1P29475 1434 aa14.24□□□□□ -0.13
COPA-202ENST00000368069 DNMT1P26358 1616 aaKnown RBP14.23□□□□□ -0.13
COPA-202ENST00000368069 GNAI3P08754 354 aa14.23□□□□□ -0.13
COPA-202ENST00000368069 PSME1Q06323 249 aa14.23□□□□□ -0.13
COPA-202ENST00000368069 THUMPD2Q9BTF0 503 aaKnown RBP14.23□□□□□ -0.13
COPA-202ENST00000368069 GPRASP1Q5JY77 1395 aa14.23□□□□□ -0.13
COPA-202ENST00000368069 SLC4A2P04920 1241 aa14.23□□□□□ -0.13
COPA-202ENST00000368069 NFE2L2Q16236 605 aa14.23□□□□□ -0.13
COPA-202ENST00000368069 KIF3AQ9Y496 699 aa14.23□□□□□ -0.13
COPA-202ENST00000368069 SYCP2Q9BX26 1530 aa14.23□□□□□ -0.13
COPA-202ENST00000368069 GAS2L2Q8NHY3 880 aa14.23□□□□□ -0.13
COPA-202ENST00000368069 TESK2Q96S53 571 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms