RNA–Protein interactions for RNA: ENST00000367893.4

LMX1A-203, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1A, Length 1,342 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-203ENST00000367893 PIK3C2GO75747 1445 aa18.18■□□□□ 0.5
LMX1A-203ENST00000367893 TRPM1Q7Z4N2 1603 aa18.17■□□□□ 0.5
LMX1A-203ENST00000367893 ADGRF5Q8IZF2 1346 aa18.17■□□□□ 0.5
LMX1A-203ENST00000367893 NALCNQ8IZF0 1738 aa18.14■□□□□ 0.5
LMX1A-203ENST00000367893 RALGAPBQ86X10 1494 aa18.14■□□□□ 0.49
LMX1A-203ENST00000367893 C1orf167Q5SNV9 1468 aa18.13■□□□□ 0.49
LMX1A-203ENST00000367893 LAMC1P11047 1609 aa18.13■□□□□ 0.49
LMX1A-203ENST00000367893 SHPRHQ149N8 1683 aa18.12■□□□□ 0.49
LMX1A-203ENST00000367893 DDX17Q92841 729 aaKnown RBP18.12■□□□□ 0.49
LMX1A-203ENST00000367893 NHSL1Q5SYE7 1610 aa18.11■□□□□ 0.49
LMX1A-203ENST00000367893 C14orf93Q9H972 538 aaKnown RBP18.1■□□□□ 0.49
LMX1A-203ENST00000367893 GPRASP1Q5JY77 1395 aa18.1■□□□□ 0.49
LMX1A-203ENST00000367893 TECPR2O15040 1411 aa18.09■□□□□ 0.49
LMX1A-203ENST00000367893 LRRC59Q96AG4 307 aaKnown RBP18.07■□□□□ 0.48
LMX1A-203ENST00000367893 ORAI2Q96SN7 254 aa18.07■□□□□ 0.48
LMX1A-203ENST00000367893 PNPLA6Q8IY17 1366 aa18.07■□□□□ 0.48
LMX1A-203ENST00000367893 ADGRB1O14514 1584 aa18.06■□□□□ 0.48
LMX1A-203ENST00000367893 CFAP70Q5T0N1 1121 aa18.06■□□□□ 0.48
LMX1A-203ENST00000367893 LRPPRCP42704 1394 aaKnown RBP18.06■□□□□ 0.48
LMX1A-203ENST00000367893 MEX3CQ5U5Q3 659 aaKnown RBP18.05■□□□□ 0.48
LMX1A-203ENST00000367893 ABCC11Q96J66 1382 aa18.05■□□□□ 0.48
LMX1A-203ENST00000367893 SOS2Q07890 1332 aaPredicted RBP18.05■□□□□ 0.48
LMX1A-203ENST00000367893 NUTM2BA6NNL0 878 aaPredicted RBP18.04■□□□□ 0.48
LMX1A-203ENST00000367893 NUTM2EB1AL46 878 aaPredicted RBP18.04■□□□□ 0.48
LMX1A-203ENST00000367893 NBPF1Q3BBV0 1214 aa18.04■□□□□ 0.48
LMX1A-203ENST00000367893 NUTM2AQ8IVF1 878 aaPredicted RBP18.04■□□□□ 0.48
LMX1A-203ENST00000367893 ROCK2O75116 1388 aaKnown RBP18.04■□□□□ 0.48
LMX1A-203ENST00000367893 ZNF772Q68DY9 489 aaPredicted RBP18.03■□□□□ 0.48
LMX1A-203ENST00000367893 TMEM132EQ6IEE7 984 aa18.03■□□□□ 0.48
LMX1A-203ENST00000367893 CDC42BPGQ6DT37 1551 aa18.03■□□□□ 0.48
LMX1A-203ENST00000367893 PLEKHH1Q9ULM0 1364 aa18.02■□□□□ 0.48
LMX1A-203ENST00000367893 WAPLQ7Z5K2 1190 aa18.02■□□□□ 0.48
LMX1A-203ENST00000367893 STK26Q9P289 416 aa18.01■□□□□ 0.47
LMX1A-203ENST00000367893 YTHDC2Q9H6S0 1430 aaKnown RBP18■□□□□ 0.47
LMX1A-203ENST00000367893 AFF2P51816 1311 aa17.99■□□□□ 0.47
LMX1A-203ENST00000367893 CARD11Q9BXL7 1154 aa17.98■□□□□ 0.47
LMX1A-203ENST00000367893 KNDC1Q76NI1 1749 aa17.97■□□□□ 0.47
LMX1A-203ENST00000367893 SIRT1Q96EB6 747 aa17.97■□□□□ 0.47
LMX1A-203ENST00000367893 PXDNQ92626 1479 aa17.96■□□□□ 0.47
LMX1A-203ENST00000367893 ESCO1Q5FWF5 840 aa17.96■□□□□ 0.46
LMX1A-203ENST00000367893 C8orf37Q96NL8 207 aa17.95■□□□□ 0.46
LMX1A-203ENST00000367893 NPHP3Q7Z494 1330 aa17.95■□□□□ 0.46
LMX1A-203ENST00000367893 ARHGEF28Q8N1W1 1705 aaKnown RBP17.94■□□□□ 0.46
LMX1A-203ENST00000367893 USP47Q96K76 1375 aa17.94■□□□□ 0.46
LMX1A-203ENST00000367893 RXRBP28702 533 aa17.94■□□□□ 0.46
LMX1A-203ENST00000367893 CDK12Q9NYV4 1490 aaPredicted RBP17.93■□□□□ 0.46
LMX1A-203ENST00000367893 DLC1Q96QB1 1528 aa17.93■□□□□ 0.46
LMX1A-203ENST00000367893 EIF4G2P78344 907 aaKnown RBP eCLIP17.93■□□□□ 0.46
LMX1A-203ENST00000367893 NUTM2FA1L443 756 aa17.92■□□□□ 0.46
LMX1A-203ENST00000367893 FOXO3O43524 673 aa17.92■□□□□ 0.46
LMX1A-203ENST00000367893 ADAMTS2O95450 1211 aa17.92■□□□□ 0.46
LMX1A-203ENST00000367893 COL22A1Q8NFW1 1626 aaPredicted RBP17.9■□□□□ 0.46
LMX1A-203ENST00000367893 HSPA5P11021 654 aaKnown RBP17.9■□□□□ 0.46
LMX1A-203ENST00000367893 XPCQ01831 940 aaPredicted RBP17.9■□□□□ 0.46
LMX1A-203ENST00000367893 EIF3AQ14152 1382 aaKnown RBP17.89■□□□□ 0.45
LMX1A-203ENST00000367893 QTRT2Q9H974 415 aaKnown RBP17.89■□□□□ 0.45
LMX1A-203ENST00000367893 FNBP4Q8N3X1 1017 aaPredicted RBP17.88■□□□□ 0.45
LMX1A-203ENST00000367893 UPF1Q92900 1129 aaKnown RBP eCLIP17.88■□□□□ 0.45
LMX1A-203ENST00000367893 NGLY1Q96IV0 654 aa17.88■□□□□ 0.45
LMX1A-203ENST00000367893 PRAM1Q96QH2 718 aa17.88■□□□□ 0.45
LMX1A-203ENST00000367893 TRAK1Q9UPV9 953 aa17.88■□□□□ 0.45
LMX1A-203ENST00000367893 RGS12O14924 1447 aa17.87■□□□□ 0.45
LMX1A-203ENST00000367893 FMN2Q9NZ56 1722 aa17.87■□□□□ 0.45
LMX1A-203ENST00000367893 RBM6P78332 1123 aaKnown RBP17.87■□□□□ 0.45
LMX1A-203ENST00000367893 ST20-MTHFSA0A0A6YYL1 179 aa17.86■□□□□ 0.45
LMX1A-203ENST00000367893 SBNO2Q9Y2G9 1366 aa17.85■□□□□ 0.45
LMX1A-203ENST00000367893 QRICH2Q9H0J4 1663 aa17.85■□□□□ 0.45
LMX1A-203ENST00000367893 SPATA31A3Q5VYP0 1347 aa17.84■□□□□ 0.45
LMX1A-203ENST00000367893 SAFB2Q14151 953 aaKnown RBP eCLIP17.84■□□□□ 0.45
LMX1A-203ENST00000367893 TESK2Q96S53 571 aa17.84■□□□□ 0.45
LMX1A-203ENST00000367893 CENPJQ9HC77 1338 aaPredicted RBP17.83■□□□□ 0.45
LMX1A-203ENST00000367893 ATRNO75882 1429 aa17.83■□□□□ 0.44
LMX1A-203ENST00000367893 USP21Q9UK80 565 aa17.83■□□□□ 0.44
LMX1A-203ENST00000367893 PHF8Q9UPP1 1060 aa17.82■□□□□ 0.44
LMX1A-203ENST00000367893 BCL9LQ86UU0 1499 aa17.82■□□□□ 0.44
LMX1A-203ENST00000367893 KIF1AQ12756 1690 aa17.81■□□□□ 0.44
LMX1A-203ENST00000367893 KRT28Q7Z3Y7 464 aa17.81■□□□□ 0.44
LMX1A-203ENST00000367893 HIRIP3Q9BW71 556 aaPredicted RBP17.81■□□□□ 0.44
LMX1A-203ENST00000367893 ADGRB2O60241 1585 aa17.81■□□□□ 0.44
LMX1A-203ENST00000367893 POGKQ9P215 609 aa17.8■□□□□ 0.44
LMX1A-203ENST00000367893 TRPC5Q9UL62 973 aaPredicted RBP17.8■□□□□ 0.44
LMX1A-203ENST00000367893 ANKARQ7Z5J8 1434 aa17.8■□□□□ 0.44
LMX1A-203ENST00000367893 ZNF316A6NFI3 1004 aaPredicted RBP17.79■□□□□ 0.44
LMX1A-203ENST00000367893 SLC24A1O60721 1099 aa17.79■□□□□ 0.44
LMX1A-203ENST00000367893 TNS3Q68CZ2 1445 aa17.79■□□□□ 0.44
LMX1A-203ENST00000367893 USP32Q8NFA0 1604 aa17.78■□□□□ 0.44
LMX1A-203ENST00000367893 SBNO1A3KN83 1393 aa17.77■□□□□ 0.44
LMX1A-203ENST00000367893 PRR36Q9H6K5 1346 aa17.77■□□□□ 0.44
LMX1A-203ENST00000367893 SLIT2O94813 1529 aa17.76■□□□□ 0.43
LMX1A-203ENST00000367893 C11orf95C9JLR9 678 aaPredicted RBP17.75■□□□□ 0.43
LMX1A-203ENST00000367893 MINK1Q8N4C8 1332 aaPredicted RBP17.75■□□□□ 0.43
LMX1A-203ENST00000367893 TULP4Q9NRJ4 1543 aa17.75■□□□□ 0.43
LMX1A-203ENST00000367893 PSME1Q06323 249 aa17.74■□□□□ 0.43
LMX1A-203ENST00000367893 PMFBP1Q8TBY8 1022 aa17.74■□□□□ 0.43
LMX1A-203ENST00000367893 WASLO00401 505 aaPredicted RBP17.73■□□□□ 0.43
LMX1A-203ENST00000367893 TMF1P82094 1093 aa17.73■□□□□ 0.43
LMX1A-203ENST00000367893 CABLES1Q8TDN4 633 aa17.72■□□□□ 0.43
LMX1A-203ENST00000367893 UNC5CLQ8IV45 518 aa17.72■□□□□ 0.43
LMX1A-203ENST00000367893 GJD4Q96KN9 370 aaPredicted RBP17.72■□□□□ 0.43
LMX1A-203ENST00000367893 PUS7Q96PZ0 661 aaKnown RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms