RNA–Protein interactions for RNA: ENST00000367563.7

LINC00272-201, long intergenic non-protein coding RNA 272, humanhuman

TSL 1 (best) BASIC

Gene LINC00272, Length 740 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00272-201ENST00000367563 ITGAEP38570 1179 aa13.28□□□□□ -0.28
LINC00272-201ENST00000367563 LRRC59Q96AG4 307 aaKnown RBP13.28□□□□□ -0.28
LINC00272-201ENST00000367563 PNPLA6Q8IY17 1366 aa13.28□□□□□ -0.28
LINC00272-201ENST00000367563 NRXN3Q9Y4C0 1643 aa13.28□□□□□ -0.28
LINC00272-201ENST00000367563 XRN1Q8IZH2 1706 aaKnown RBP13.27□□□□□ -0.29
LINC00272-201ENST00000367563 ADAMTS2O95450 1211 aa13.26□□□□□ -0.29
LINC00272-201ENST00000367563 RBM6P78332 1123 aaKnown RBP13.26□□□□□ -0.29
LINC00272-201ENST00000367563 FKBP8Q14318 412 aa13.26□□□□□ -0.29
LINC00272-201ENST00000367563 IQGAP3Q86VI3 1631 aa13.26□□□□□ -0.29
LINC00272-201ENST00000367563 ZNF326Q5BKZ1 582 aaKnown RBP13.25□□□□□ -0.29
LINC00272-201ENST00000367563 NHSL1Q5SYE7 1610 aa13.24□□□□□ -0.29
LINC00272-201ENST00000367563 SETBP1Q9Y6X0 1596 aa13.24□□□□□ -0.29
LINC00272-201ENST00000367563 ADGRL3Q9HAR2 1447 aa13.24□□□□□ -0.29
LINC00272-201ENST00000367563 NGLY1Q96IV0 654 aa13.24□□□□□ -0.29
LINC00272-201ENST00000367563 HFM1A2PYH4 1435 aa13.22□□□□□ -0.29
LINC00272-201ENST00000367563 ORAI2Q96SN7 254 aa13.22□□□□□ -0.29
LINC00272-201ENST00000367563 C1orf167Q5SNV9 1468 aa13.22□□□□□ -0.29
LINC00272-201ENST00000367563 SRCAPQ6ZRS2 3230 aa13.21□□□□□ -0.29
LINC00272-201ENST00000367563 NAIPQ13075 1403 aa13.21□□□□□ -0.3
LINC00272-201ENST00000367563 NALCNQ8IZF0 1738 aa13.19□□□□□ -0.3
LINC00272-201ENST00000367563 USP21Q9UK80 565 aa13.19□□□□□ -0.3
LINC00272-201ENST00000367563 ROBO2Q9HCK4 1378 aa13.19□□□□□ -0.3
LINC00272-201ENST00000367563 SOS2Q07890 1332 aaPredicted RBP13.18□□□□□ -0.3
LINC00272-201ENST00000367563 ATAD2Q6PL18 1390 aa13.18□□□□□ -0.3
LINC00272-201ENST00000367563 NEXMIFQ5QGS0 1516 aa13.18□□□□□ -0.3
LINC00272-201ENST00000367563 TRPC5Q9UL62 973 aaPredicted RBP13.16□□□□□ -0.3
LINC00272-201ENST00000367563 CLTCL1P53675 1640 aa13.16□□□□□ -0.3
LINC00272-201ENST00000367563 SPDYE4A6NLX3 237 aa13.15□□□□□ -0.3
LINC00272-201ENST00000367563 FNBP4Q8N3X1 1017 aaPredicted RBP13.15□□□□□ -0.3
LINC00272-201ENST00000367563 ATRNO75882 1429 aa13.14□□□□□ -0.31
LINC00272-201ENST00000367563 SPHKAPQ2M3C7 1700 aa13.14□□□□□ -0.31
LINC00272-201ENST00000367563 PTCH1Q13635 1447 aa13.13□□□□□ -0.31
LINC00272-201ENST00000367563 XPCQ01831 940 aaPredicted RBP13.13□□□□□ -0.31
LINC00272-201ENST00000367563 LAMC1P11047 1609 aa13.13□□□□□ -0.31
LINC00272-201ENST00000367563 ZRANB1Q9UGI0 708 aa13.12□□□□□ -0.31
LINC00272-201ENST00000367563 ACIN1Q9UKV3 1341 aaKnown RBP13.12□□□□□ -0.31
LINC00272-201ENST00000367563 BCL9LQ86UU0 1499 aa13.11□□□□□ -0.31
LINC00272-201ENST00000367563 MYOM2P54296 1465 aa13.1□□□□□ -0.31
LINC00272-201ENST00000367563 VGFO15240 615 aaPredicted RBP13.1□□□□□ -0.31
LINC00272-201ENST00000367563 ESCO1Q5FWF5 840 aa13.1□□□□□ -0.31
LINC00272-201ENST00000367563 NUTM2FA1L443 756 aa13.09□□□□□ -0.31
LINC00272-201ENST00000367563 FOXO3O43524 673 aa13.09□□□□□ -0.31
LINC00272-201ENST00000367563 GJD4Q96KN9 370 aaPredicted RBP13.08□□□□□ -0.32
LINC00272-201ENST00000367563 COL22A1Q8NFW1 1626 aaPredicted RBP13.08□□□□□ -0.32
LINC00272-201ENST00000367563 PXDNQ92626 1479 aa13.08□□□□□ -0.32
LINC00272-201ENST00000367563 PRAG1Q86YV5 1406 aa13.07□□□□□ -0.32
LINC00272-201ENST00000367563 NPHP3Q7Z494 1330 aa13.07□□□□□ -0.32
LINC00272-201ENST00000367563 SPDYE2BA6NHP3 402 aa13.06□□□□□ -0.32
LINC00272-201ENST00000367563 SPDYE6P0CI01 402 aa13.06□□□□□ -0.32
LINC00272-201ENST00000367563 SPDYE2Q495Y8 402 aa13.06□□□□□ -0.32
LINC00272-201ENST00000367563 EP400Q96L91 3159 aa13.05□□□□□ -0.32
LINC00272-201ENST00000367563 WAPLQ7Z5K2 1190 aa13.05□□□□□ -0.32
LINC00272-201ENST00000367563 CCDC125Q86Z20 511 aa13.05□□□□□ -0.32
LINC00272-201ENST00000367563 STK26Q9P289 416 aa13.05□□□□□ -0.32
LINC00272-201ENST00000367563 DEFB132Q7Z7B7 95 aa13.04□□□□□ -0.32
LINC00272-201ENST00000367563 RPGRIP1LQ68CZ1 1315 aa13.04□□□□□ -0.32
LINC00272-201ENST00000367563 RALGAPBQ86X10 1494 aa13.04□□□□□ -0.32
LINC00272-201ENST00000367563 CDC42BPGQ6DT37 1551 aa13.03□□□□□ -0.32
LINC00272-201ENST00000367563 UNC5CLQ8IV45 518 aa13.03□□□□□ -0.32
LINC00272-201ENST00000367563 ADGRF5Q8IZF2 1346 aa13.03□□□□□ -0.32
LINC00272-201ENST00000367563 RAB3GAP2Q9H2M9 1393 aa13.03□□□□□ -0.32
LINC00272-201ENST00000367563 PLEKHH1Q9ULM0 1364 aa13.03□□□□□ -0.32
LINC00272-201ENST00000367563 PLEKHG5O94827 1062 aa13.02□□□□□ -0.33
LINC00272-201ENST00000367563 GLI3P10071 1580 aa13.02□□□□□ -0.33
LINC00272-201ENST00000367563 TMEM132EQ6IEE7 984 aa13.01□□□□□ -0.33
LINC00272-201ENST00000367563 ZNF692Q9BU19 519 aaPredicted RBP13.01□□□□□ -0.33
LINC00272-201ENST00000367563 BLMP54132 1417 aaPredicted RBP13.01□□□□□ -0.33
LINC00272-201ENST00000367563 SLIT2O94813 1529 aa13.01□□□□□ -0.33
LINC00272-201ENST00000367563 KIF1BO60333 1816 aa13.01□□□□□ -0.33
LINC00272-201ENST00000367563 SPATA31A3Q5VYP0 1347 aa13□□□□□ -0.33
LINC00272-201ENST00000367563 CABLES1Q8TDN4 633 aa13□□□□□ -0.33
LINC00272-201ENST00000367563 LRPPRCP42704 1394 aaKnown RBP12.99□□□□□ -0.33
LINC00272-201ENST00000367563 RGL3Q3MIN7 710 aa12.99□□□□□ -0.33
LINC00272-201ENST00000367563 SEPT12Q8IYM1 358 aa12.99□□□□□ -0.33
LINC00272-201ENST00000367563 KRT28Q7Z3Y7 464 aa12.98□□□□□ -0.33
LINC00272-201ENST00000367563 TECPR2O15040 1411 aa12.97□□□□□ -0.33
LINC00272-201ENST00000367563 PPLO60437 1756 aa12.97□□□□□ -0.33
LINC00272-201ENST00000367563 RBM42Q9BTD8 480 aaKnown RBP12.97□□□□□ -0.33
LINC00272-201ENST00000367563 MARF1Q9Y4F3 1742 aaKnown RBP12.96□□□□□ -0.33
LINC00272-201ENST00000367563 PROM2Q8N271 834 aa12.96□□□□□ -0.33
LINC00272-201ENST00000367563 ABCC11Q96J66 1382 aa12.95□□□□□ -0.34
LINC00272-201ENST00000367563 PSDA5PKW4 1024 aaPredicted RBP12.95□□□□□ -0.34
LINC00272-201ENST00000367563 HRCP23327 699 aa12.95□□□□□ -0.34
LINC00272-201ENST00000367563 VPS72Q15906 364 aa12.95□□□□□ -0.34
LINC00272-201ENST00000367563 SSUH2Q9Y2M2 353 aa12.95□□□□□ -0.34
LINC00272-201ENST00000367563 CCDC9Q9Y3X0 531 aaKnown RBP12.95□□□□□ -0.34
LINC00272-201ENST00000367563 CCDC144AA2RUR9 1427 aa12.95□□□□□ -0.34
LINC00272-201ENST00000367563 USP32Q8NFA0 1604 aa12.95□□□□□ -0.34
LINC00272-201ENST00000367563 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.94□□□□□ -0.34
LINC00272-201ENST00000367563 HAP1P54257 671 aaPredicted RBP12.94□□□□□ -0.34
LINC00272-201ENST00000367563 SF3B2Q13435 895 aaKnown RBP12.94□□□□□ -0.34
LINC00272-201ENST00000367563 MPHOSPH9Q99550 1183 aa12.94□□□□□ -0.34
LINC00272-201ENST00000367563 SPATA31E1Q6ZUB1 1445 aa12.94□□□□□ -0.34
LINC00272-201ENST00000367563 ONECUT3O60422 494 aaPredicted RBP12.93□□□□□ -0.34
LINC00272-201ENST00000367563 LMOD2Q6P5Q4 547 aa12.93□□□□□ -0.34
LINC00272-201ENST00000367563 KRT27Q7Z3Y8 459 aa12.93□□□□□ -0.34
LINC00272-201ENST00000367563 PHF8Q9UPP1 1060 aa12.93□□□□□ -0.34
LINC00272-201ENST00000367563 TNS3Q68CZ2 1445 aa12.93□□□□□ -0.34
LINC00272-201ENST00000367563 FAM83GA6ND36 823 aa12.92□□□□□ -0.34
LINC00272-201ENST00000367563 YTHDC2Q9H6S0 1430 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms