RNA–Protein interactions for RNA: ENST00000367002.4

RD3-201, Transcript of retinal degeneration 3, GUCY2D regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RD3, Length 4,266 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RD3-201ENST00000367002 NEXNQ0ZGT2 675 aa14□□□□□ -0.17
RD3-201ENST00000367002 WDR63Q8IWG1 891 aa14□□□□□ -0.17
RD3-201ENST00000367002 CC2D2AQ9P2K1 1620 aa14□□□□□ -0.17
RD3-201ENST00000367002 CDK13Q14004 1512 aaKnown RBP14□□□□□ -0.17
RD3-201ENST00000367002 BECN2A8MW95 431 aa13.99□□□□□ -0.17
RD3-201ENST00000367002 ATF7IPQ6VMQ6 1270 aa13.99□□□□□ -0.17
RD3-201ENST00000367002 CCDC34Q96HJ3 373 aa13.99□□□□□ -0.17
RD3-201ENST00000367002 TOMM22Q9NS69 142 aa13.99□□□□□ -0.17
RD3-201ENST00000367002 ISY1Q9ULR0 285 aaKnown RBP13.99□□□□□ -0.17
RD3-201ENST00000367002 TWISTNBQ3B726 338 aaPredicted RBP13.99□□□□□ -0.17
RD3-201ENST00000367002 PRAM1Q96QH2 718 aa13.99□□□□□ -0.17
RD3-201ENST00000367002 GOLGA6L19H0YKK7 550 aa13.99□□□□□ -0.17
RD3-201ENST00000367002 WWC1Q8IX03 1113 aa13.99□□□□□ -0.17
RD3-201ENST00000367002 VPS37CA5D8V6 355 aaPredicted RBP13.98□□□□□ -0.17
RD3-201ENST00000367002 MVPQ14764 893 aaKnown RBP13.98□□□□□ -0.17
RD3-201ENST00000367002 VSIG10Q8N0Z9 540 aa13.98□□□□□ -0.17
RD3-201ENST00000367002 MAP3K1Q13233 1512 aa13.97□□□□□ -0.17
RD3-201ENST00000367002 SMC3Q9UQE7 1217 aa13.97□□□□□ -0.17
RD3-201ENST00000367002 NCOA1Q15788 1441 aa13.97□□□□□ -0.17
RD3-201ENST00000367002 NASPP49321 788 aaPredicted RBP13.97□□□□□ -0.17
RD3-201ENST00000367002 PCF11O94913 1555 aaKnown RBP13.96□□□□□ -0.17
RD3-201ENST00000367002 SCAPERQ9BY12 1400 aa13.96□□□□□ -0.17
RD3-201ENST00000367002 NEK4P51957 841 aa13.96□□□□□ -0.17
RD3-201ENST00000367002 RNF214Q8ND24 703 aa13.96□□□□□ -0.17
RD3-201ENST00000367002 GCC1Q96CN9 775 aa13.96□□□□□ -0.17
RD3-201ENST00000367002 FAM13BQ9NYF5 915 aa13.96□□□□□ -0.17
RD3-201ENST00000367002 ABCC5O15440 1437 aa13.96□□□□□ -0.17
RD3-201ENST00000367002 SUPT6HQ7KZ85 1726 aaKnown RBP13.96□□□□□ -0.17
RD3-201ENST00000367002 CABP1Q9NZU7 370 aa13.96□□□□□ -0.18
RD3-201ENST00000367002 G3BP1Q13283 466 aaKnown RBP eCLIP13.95□□□□□ -0.18
RD3-201ENST00000367002 CT47B1P0C2W7 299 aaPredicted RBP13.95□□□□□ -0.18
RD3-201ENST00000367002 UBTFL1P0CB47 393 aaPredicted RBP13.95□□□□□ -0.18
RD3-201ENST00000367002 NLRP6P59044 892 aa13.95□□□□□ -0.18
RD3-201ENST00000367002 HSP90AB4PQ58FF6 505 aa13.95□□□□□ -0.18
RD3-201ENST00000367002 ABCA10Q8WWZ4 1543 aa13.94□□□□□ -0.18
RD3-201ENST00000367002 CAVIN1Q6NZI2 390 aaKnown RBP13.94□□□□□ -0.18
RD3-201ENST00000367002 RNF20Q5VTR2 975 aa13.94□□□□□ -0.18
RD3-201ENST00000367002 HECW1Q76N89 1606 aa13.94□□□□□ -0.18
RD3-201ENST00000367002 DDX58O95786 925 aaKnown RBP13.94□□□□□ -0.18
RD3-201ENST00000367002 GNAI3P08754 354 aa13.94□□□□□ -0.18
RD3-201ENST00000367002 NUTM2GQ5VZR2 741 aa13.94□□□□□ -0.18
RD3-201ENST00000367002 BICD2Q8TD16 824 aa13.94□□□□□ -0.18
RD3-201ENST00000367002 SURF6O75683 361 aaKnown RBP13.93□□□□□ -0.18
RD3-201ENST00000367002 FAM69CQ0P6D2 419 aa13.93□□□□□ -0.18
RD3-201ENST00000367002 AMER1Q5JTC6 1135 aaPredicted RBP13.93□□□□□ -0.18
RD3-201ENST00000367002 CREBRFQ8IUR6 639 aa13.93□□□□□ -0.18
RD3-201ENST00000367002 RABEP1Q15276 862 aa13.93□□□□□ -0.18
RD3-201ENST00000367002 TTC5Q8N0Z6 440 aa13.93□□□□□ -0.18
RD3-201ENST00000367002 PSME1Q06323 249 aa13.93□□□□□ -0.18
RD3-201ENST00000367002 ERC2O15083 957 aa13.92□□□□□ -0.18
RD3-201ENST00000367002 CHMP4CQ96CF2 233 aa13.92□□□□□ -0.18
RD3-201ENST00000367002 NINLQ9Y2I6 1382 aa13.92□□□□□ -0.18
RD3-201ENST00000367002 SULT6B1Q6IMI4 303 aa13.92□□□□□ -0.18
RD3-201ENST00000367002 KIAA0586Q9BVV6 1533 aa13.92□□□□□ -0.18
RD3-201ENST00000367002 PRPF40AO75400 957 aaKnown RBP13.91□□□□□ -0.18
RD3-201ENST00000367002 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.91□□□□□ -0.18
RD3-201ENST00000367002 RASSF8Q8NHQ8 419 aa13.91□□□□□ -0.18
RD3-201ENST00000367002 SLC4A2P04920 1241 aa13.91□□□□□ -0.18
RD3-201ENST00000367002 MCM4P33991 863 aa13.91□□□□□ -0.18
RD3-201ENST00000367002 CDK19Q9BWU1 502 aa13.91□□□□□ -0.18
RD3-201ENST00000367002 RPRD2Q5VT52 1461 aaKnown RBP13.91□□□□□ -0.18
RD3-201ENST00000367002 CPLX2Q6PUV4 134 aaKnown RBP13.91□□□□□ -0.18
RD3-201ENST00000367002 CHD1LQ86WJ1 897 aa13.91□□□□□ -0.18
RD3-201ENST00000367002 DNMBPQ6XZF7 1577 aa13.91□□□□□ -0.18
RD3-201ENST00000367002 CLASRPQ8N2M8 674 aaKnown RBP13.9□□□□□ -0.18
RD3-201ENST00000367002 TMPOP42166 694 aaKnown RBP13.9□□□□□ -0.18
RD3-201ENST00000367002 PLEKHH2Q8IVE3 1493 aa13.9□□□□□ -0.18
RD3-201ENST00000367002 IFT140Q96RY7 1462 aa13.9□□□□□ -0.18
RD3-201ENST00000367002 TXNDC2Q86VQ3 553 aa13.9□□□□□ -0.18
RD3-201ENST00000367002 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.9□□□□□ -0.19
RD3-201ENST00000367002 RARSP54136 660 aaKnown RBP13.9□□□□□ -0.19
RD3-201ENST00000367002 AIMP1Q12904 312 aaKnown RBP13.9□□□□□ -0.19
RD3-201ENST00000367002 DUSP27Q5VZP5 1158 aa13.9□□□□□ -0.19
RD3-201ENST00000367002 ZNF592Q92610 1267 aa13.9□□□□□ -0.19
RD3-201ENST00000367002 SLC52A1Q9NWF4 448 aa13.9□□□□□ -0.19
RD3-201ENST00000367002 SNAPC4Q5SXM2 1469 aa13.89□□□□□ -0.19
RD3-201ENST00000367002 CPLX1O14810 134 aa13.89□□□□□ -0.19
RD3-201ENST00000367002 CCDC30Q5VVM6 783 aa13.89□□□□□ -0.19
RD3-201ENST00000367002 MBD3O95983 291 aa13.89□□□□□ -0.19
RD3-201ENST00000367002 LRRFIP1Q32MZ4 808 aaKnown RBP13.89□□□□□ -0.19
RD3-201ENST00000367002 TMEM57Q8N5G2 664 aa13.89□□□□□ -0.19
RD3-201ENST00000367002 GTF2E1P29083 439 aaPredicted RBP13.88□□□□□ -0.19
RD3-201ENST00000367002 MRC2Q9UBG0 1479 aa13.88□□□□□ -0.19
RD3-201ENST00000367002 GAS2L2Q8NHY3 880 aa13.88□□□□□ -0.19
RD3-201ENST00000367002 K7ELQ4 463 aaPredicted RBP13.87□□□□□ -0.19
RD3-201ENST00000367002 GNAI2P04899 355 aa13.87□□□□□ -0.19
RD3-201ENST00000367002 MCM2P49736 904 aa13.87□□□□□ -0.19
RD3-201ENST00000367002 ANO8Q9HCE9 1232 aaPredicted RBP13.87□□□□□ -0.19
RD3-201ENST00000367002 R3HCC1Q9Y3T6 440 aaKnown RBP13.87□□□□□ -0.19
RD3-201ENST00000367002 PTPN23Q9H3S7 1636 aa13.87□□□□□ -0.19
RD3-201ENST00000367002 ARHGEF11O15085 1522 aa13.87□□□□□ -0.19
RD3-201ENST00000367002 FCHSD2O94868 740 aa13.87□□□□□ -0.19
RD3-201ENST00000367002 SSH1Q8WYL5 1049 aa13.87□□□□□ -0.19
RD3-201ENST00000367002 PTPRKQ15262 1439 aa13.87□□□□□ -0.19
RD3-201ENST00000367002 NSD3Q9BZ95 1437 aa13.87□□□□□ -0.19
RD3-201ENST00000367002 RIC3Q7Z5B4 369 aa13.87□□□□□ -0.19
RD3-201ENST00000367002 RAPGEF3O95398 923 aa13.86□□□□□ -0.19
RD3-201ENST00000367002 APPP05067 770 aa13.86□□□□□ -0.19
RD3-201ENST00000367002 SASS6Q6UVJ0 657 aa13.86□□□□□ -0.19
RD3-201ENST00000367002 ZNF428Q96B54 188 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms