RNA–Protein interactions for RNA: ENST00000366873.6

CAPN8-202, Transcript of calpain 8, humanhuman

TSL 5 BASIC

Gene CAPN8, Length 2,596 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8-202ENST00000366873 PTCH1Q13635 1447 aa13.66□□□□□ -0.22
CAPN8-202ENST00000366873 RBM33Q96EV2 1170 aaKnown RBP13.66□□□□□ -0.22
CAPN8-202ENST00000366873 ZNF335Q9H4Z2 1342 aaPredicted RBP13.66□□□□□ -0.22
CAPN8-202ENST00000366873 POGKQ9P215 609 aa13.65□□□□□ -0.22
CAPN8-202ENST00000366873 KNDC1Q76NI1 1749 aa13.65□□□□□ -0.22
CAPN8-202ENST00000366873 STRCP1A6NGW2 1772 aa13.65□□□□□ -0.22
CAPN8-202ENST00000366873 SBNO2Q9Y2G9 1366 aa13.65□□□□□ -0.23
CAPN8-202ENST00000366873 NWD1Q149M9 1564 aa13.64□□□□□ -0.23
CAPN8-202ENST00000366873 DISP3Q9P2K9 1392 aa13.63□□□□□ -0.23
CAPN8-202ENST00000366873 WASHC2AQ641Q2 1341 aa13.62□□□□□ -0.23
CAPN8-202ENST00000366873 MINK1Q8N4C8 1332 aaPredicted RBP13.62□□□□□ -0.23
CAPN8-202ENST00000366873 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.61□□□□□ -0.23
CAPN8-202ENST00000366873 QRICH2Q9H0J4 1663 aa13.61□□□□□ -0.23
CAPN8-202ENST00000366873 KIF7Q2M1P5 1343 aa13.6□□□□□ -0.23
CAPN8-202ENST00000366873 NKTRP30414 1462 aaKnown RBP13.6□□□□□ -0.23
CAPN8-202ENST00000366873 PROSER2Q86WR7 435 aaPredicted RBP13.6□□□□□ -0.23
CAPN8-202ENST00000366873 TMF1P82094 1093 aa13.59□□□□□ -0.23
CAPN8-202ENST00000366873 TULP4Q9NRJ4 1543 aa13.59□□□□□ -0.23
CAPN8-202ENST00000366873 TMEM94Q12767 1356 aa13.59□□□□□ -0.23
CAPN8-202ENST00000366873 CCDC7Q96M83 1385 aa13.57□□□□□ -0.24
CAPN8-202ENST00000366873 WASLO00401 505 aaPredicted RBP13.57□□□□□ -0.24
CAPN8-202ENST00000366873 SLC24A1O60721 1099 aa13.57□□□□□ -0.24
CAPN8-202ENST00000366873 CDK19Q9BWU1 502 aa13.57□□□□□ -0.24
CAPN8-202ENST00000366873 CABP2Q9NPB3 220 aa13.57□□□□□ -0.24
CAPN8-202ENST00000366873 LRRC7Q96NW7 1537 aa13.57□□□□□ -0.24
CAPN8-202ENST00000366873 EVC2Q86UK5 1308 aa13.56□□□□□ -0.24
CAPN8-202ENST00000366873 LTBP4Q8N2S1 1624 aa13.55□□□□□ -0.24
CAPN8-202ENST00000366873 ADGRB2O60241 1585 aa13.54□□□□□ -0.24
CAPN8-202ENST00000366873 ADGRL3Q9HAR2 1447 aa13.54□□□□□ -0.24
CAPN8-202ENST00000366873 NCOA3Q9Y6Q9 1424 aa13.54□□□□□ -0.24
CAPN8-202ENST00000366873 PUS7Q96PZ0 661 aaKnown RBP13.54□□□□□ -0.24
CAPN8-202ENST00000366873 C19orf44Q9H6X5 657 aa13.54□□□□□ -0.24
CAPN8-202ENST00000366873 NALCNQ8IZF0 1738 aa13.53□□□□□ -0.24
CAPN8-202ENST00000366873 SRPK2P78362 688 aaKnown RBP13.53□□□□□ -0.24
CAPN8-202ENST00000366873 PRR36Q9H6K5 1346 aa13.53□□□□□ -0.24
CAPN8-202ENST00000366873 POLR3GLQ9BT43 218 aa13.53□□□□□ -0.24
CAPN8-202ENST00000366873 NUTM2FA1L443 756 aa13.52□□□□□ -0.24
CAPN8-202ENST00000366873 CDCA8Q53HL2 280 aa13.52□□□□□ -0.24
CAPN8-202ENST00000366873 XIRP1Q702N8 1843 aaKnown RBP13.52□□□□□ -0.24
CAPN8-202ENST00000366873 C14orf37Q86TY3 774 aa13.52□□□□□ -0.25
CAPN8-202ENST00000366873 DDX10Q13206 875 aaKnown RBP13.51□□□□□ -0.25
CAPN8-202ENST00000366873 NUDT16Q96DE0 195 aaKnown RBP13.51□□□□□ -0.25
CAPN8-202ENST00000366873 SLC12A5Q9H2X9 1139 aa13.51□□□□□ -0.25
CAPN8-202ENST00000366873 CDC42BPGQ6DT37 1551 aa13.5□□□□□ -0.25
CAPN8-202ENST00000366873 ATP7BP35670 1465 aa13.5□□□□□ -0.25
CAPN8-202ENST00000366873 CABP1Q9NZU7 370 aa13.49□□□□□ -0.25
CAPN8-202ENST00000366873 CCDC61Q9Y6R9 512 aa13.49□□□□□ -0.25
CAPN8-202ENST00000366873 USP32Q8NFA0 1604 aa13.48□□□□□ -0.25
CAPN8-202ENST00000366873 ATAD2Q6PL18 1390 aa13.48□□□□□ -0.25
CAPN8-202ENST00000366873 DCCP43146 1447 aa13.47□□□□□ -0.25
CAPN8-202ENST00000366873 MSH6P52701 1360 aa13.47□□□□□ -0.25
CAPN8-202ENST00000366873 TMC1Q8TDI8 760 aa13.47□□□□□ -0.25
CAPN8-202ENST00000366873 MYOM1P52179 1685 aa13.46□□□□□ -0.25
CAPN8-202ENST00000366873 ATF3P18847 181 aa13.46□□□□□ -0.26
CAPN8-202ENST00000366873 CADPS2Q86UW7 1296 aa13.46□□□□□ -0.26
CAPN8-202ENST00000366873 PANK3Q9H999 370 aa13.46□□□□□ -0.26
CAPN8-202ENST00000366873 FMN2Q9NZ56 1722 aa13.46□□□□□ -0.26
CAPN8-202ENST00000366873 CD163L1Q9NR16 1453 aa13.46□□□□□ -0.26
CAPN8-202ENST00000366873 MST1RQ04912 1400 aa13.45□□□□□ -0.26
CAPN8-202ENST00000366873 PER1O15534 1290 aaPredicted RBP13.45□□□□□ -0.26
CAPN8-202ENST00000366873 ORAI2Q96SN7 254 aa13.45□□□□□ -0.26
CAPN8-202ENST00000366873 PPIP5K1Q6PFW1 1433 aa13.45□□□□□ -0.26
CAPN8-202ENST00000366873 ANKARQ7Z5J8 1434 aa13.45□□□□□ -0.26
CAPN8-202ENST00000366873 PLEKHG3A1L390 1219 aa13.45□□□□□ -0.26
CAPN8-202ENST00000366873 CARD14Q9BXL6 1004 aa13.45□□□□□ -0.26
CAPN8-202ENST00000366873 C1orf167Q5SNV9 1468 aa13.44□□□□□ -0.26
CAPN8-202ENST00000366873 RGPD8O14715 1765 aaPredicted RBP13.43□□□□□ -0.26
CAPN8-202ENST00000366873 PMFBP1Q8TBY8 1022 aa13.43□□□□□ -0.26
CAPN8-202ENST00000366873 SLAIN2Q9P270 581 aa13.43□□□□□ -0.26
CAPN8-202ENST00000366873 NINLQ9Y2I6 1382 aa13.43□□□□□ -0.26
CAPN8-202ENST00000366873 CPSF1Q10570 1443 aaKnown RBP13.42□□□□□ -0.26
CAPN8-202ENST00000366873 ESCO1Q5FWF5 840 aa13.42□□□□□ -0.26
CAPN8-202ENST00000366873 TOPAZ1Q8N9V7 1692 aa13.42□□□□□ -0.26
CAPN8-202ENST00000366873 A0A1W2PP64 1363 aa13.42□□□□□ -0.26
CAPN8-202ENST00000366873 ANKRD36BQ8N2N9 1353 aa13.42□□□□□ -0.26
CAPN8-202ENST00000366873 ACEP12821 1306 aa13.41□□□□□ -0.26
CAPN8-202ENST00000366873 PHF8Q9UPP1 1060 aa13.4□□□□□ -0.26
CAPN8-202ENST00000366873 POLR3AO14802 1390 aaPredicted RBP13.4□□□□□ -0.26
CAPN8-202ENST00000366873 BRINP3Q76B58 766 aa13.39□□□□□ -0.27
CAPN8-202ENST00000366873 CERKQ8TCT0 537 aa13.39□□□□□ -0.27
CAPN8-202ENST00000366873 TERF2IPQ9NYB0 399 aa13.39□□□□□ -0.27
CAPN8-202ENST00000366873 FOXO3O43524 673 aa13.38□□□□□ -0.27
CAPN8-202ENST00000366873 AMER1Q5JTC6 1135 aaPredicted RBP13.37□□□□□ -0.27
CAPN8-202ENST00000366873 DDX17Q92841 729 aaKnown RBP13.37□□□□□ -0.27
CAPN8-202ENST00000366873 ZNF692Q9BU19 519 aaPredicted RBP13.37□□□□□ -0.27
CAPN8-202ENST00000366873 SSH2Q76I76 1423 aa13.37□□□□□ -0.27
CAPN8-202ENST00000366873 HDGFL2Q7Z4V5 671 aaPredicted RBP13.37□□□□□ -0.27
CAPN8-202ENST00000366873 NGDNQ8NEJ9 315 aaKnown RBP13.37□□□□□ -0.27
CAPN8-202ENST00000366873 NSD3Q9BZ95 1437 aa13.36□□□□□ -0.27
CAPN8-202ENST00000366873 KTN1Q86UP2 1357 aaKnown RBP13.36□□□□□ -0.27
CAPN8-202ENST00000366873 ITSN1Q15811 1721 aa13.36□□□□□ -0.27
CAPN8-202ENST00000366873 USP6P35125 1406 aa13.36□□□□□ -0.27
CAPN8-202ENST00000366873 KNSTRNQ9Y448 316 aa13.35□□□□□ -0.27
CAPN8-202ENST00000366873 IQSEC2Q5JU85 1478 aa13.35□□□□□ -0.27
CAPN8-202ENST00000366873 FYB1O15117 783 aa13.34□□□□□ -0.27
CAPN8-202ENST00000366873 XPCQ01831 940 aaPredicted RBP13.34□□□□□ -0.27
CAPN8-202ENST00000366873 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.33□□□□□ -0.27
CAPN8-202ENST00000366873 EDC4Q6P2E9 1401 aaKnown RBP13.33□□□□□ -0.28
CAPN8-202ENST00000366873 TOM1O60784 492 aa13.33□□□□□ -0.28
CAPN8-202ENST00000366873 PSME1Q06323 249 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms