RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 KLHL34Q8N239 644 aa13.29□□□□□ -0.28
CDC42BPA-205ENST00000366769 PDILTQ8N807 584 aa13.29□□□□□ -0.28
CDC42BPA-205ENST00000366769 USP8P40818 1118 aa13.29□□□□□ -0.28
CDC42BPA-205ENST00000366769 ANKRD20A12PQ8NF67 263 aa13.29□□□□□ -0.28
CDC42BPA-205ENST00000366769 TDO2P48775 406 aa13.29□□□□□ -0.28
CDC42BPA-205ENST00000366769 SYNE3Q6ZMZ3 975 aa13.28□□□□□ -0.28
CDC42BPA-205ENST00000366769 ARHGAP35Q9NRY4 1499 aa13.28□□□□□ -0.28
CDC42BPA-205ENST00000366769 BICD2Q8TD16 824 aa13.28□□□□□ -0.28
CDC42BPA-205ENST00000366769 VPS37CA5D8V6 355 aaPredicted RBP13.28□□□□□ -0.28
CDC42BPA-205ENST00000366769 ROCK2O75116 1388 aaKnown RBP13.28□□□□□ -0.28
CDC42BPA-205ENST00000366769 PANK1Q8TE04 598 aa13.28□□□□□ -0.28
CDC42BPA-205ENST00000366769 WDR97A6NE52 1622 aa13.28□□□□□ -0.28
CDC42BPA-205ENST00000366769 NEFHP12036 1026 aa13.27□□□□□ -0.28
CDC42BPA-205ENST00000366769 ATP6V1DQ9Y5K8 247 aa13.27□□□□□ -0.29
CDC42BPA-205ENST00000366769 LMOD3Q0VAK6 560 aa13.27□□□□□ -0.29
CDC42BPA-205ENST00000366769 MNAT1P51948 309 aa13.27□□□□□ -0.29
CDC42BPA-205ENST00000366769 HDGFP51858 240 aaKnown RBP13.26□□□□□ -0.29
CDC42BPA-205ENST00000366769 NGEFQ8N5V2 710 aa13.26□□□□□ -0.29
CDC42BPA-205ENST00000366769 CCDC27Q2M243 656 aa13.26□□□□□ -0.29
CDC42BPA-205ENST00000366769 CLCN1P35523 988 aa13.26□□□□□ -0.29
CDC42BPA-205ENST00000366769 EPS15P42566 896 aa13.26□□□□□ -0.29
CDC42BPA-205ENST00000366769 ANKRD45Q5TZF3 282 aa13.26□□□□□ -0.29
CDC42BPA-205ENST00000366769 CCDC102AQ96A19 550 aa13.25□□□□□ -0.29
CDC42BPA-205ENST00000366769 NUCB2P80303 420 aa13.25□□□□□ -0.29
CDC42BPA-205ENST00000366769 TRIM29Q14134 588 aa13.25□□□□□ -0.29
CDC42BPA-205ENST00000366769 PRKRIP1Q9H875 184 aaPredicted RBP13.25□□□□□ -0.29
CDC42BPA-205ENST00000366769 KANK1Q14678 1352 aa13.25□□□□□ -0.29
CDC42BPA-205ENST00000366769 CT47B1P0C2W7 299 aaPredicted RBP13.25□□□□□ -0.29
CDC42BPA-205ENST00000366769 CCDC47Q96A33 483 aaKnown RBP13.25□□□□□ -0.29
CDC42BPA-205ENST00000366769 HDAC5Q9UQL6 1122 aa13.25□□□□□ -0.29
CDC42BPA-205ENST00000366769 CNTLNQ9NXG0 1405 aa13.25□□□□□ -0.29
CDC42BPA-205ENST00000366769 BRD2P25440 801 aaKnown RBP13.24□□□□□ -0.29
CDC42BPA-205ENST00000366769 KANK4Q5T7N3 995 aaPredicted RBP13.24□□□□□ -0.29
CDC42BPA-205ENST00000366769 XRCC6P12956 609 aaKnown RBP eCLIP13.24□□□□□ -0.29
CDC42BPA-205ENST00000366769 CLGNO14967 610 aa13.24□□□□□ -0.29
CDC42BPA-205ENST00000366769 DCTN1Q14203 1278 aa13.24□□□□□ -0.29
CDC42BPA-205ENST00000366769 MYBBP1AQ9BQG0 1328 aaKnown RBP13.24□□□□□ -0.29
CDC42BPA-205ENST00000366769 C16orf45Q96MC5 204 aaPredicted RBP13.24□□□□□ -0.29
CDC42BPA-205ENST00000366769 SOGA1O94964 1423 aa13.23□□□□□ -0.29
CDC42BPA-205ENST00000366769 TMEM132AQ24JP5 1023 aa13.23□□□□□ -0.29
CDC42BPA-205ENST00000366769 CGNL1Q0VF96 1302 aa13.23□□□□□ -0.29
CDC42BPA-205ENST00000366769 AMOTL1Q8IY63 956 aa13.23□□□□□ -0.29
CDC42BPA-205ENST00000366769 VPS37DQ86XT2 251 aa13.23□□□□□ -0.29
CDC42BPA-205ENST00000366769 FAM177A1Q8N128 213 aaPredicted RBP13.22□□□□□ -0.29
CDC42BPA-205ENST00000366769 FIBPO43427 364 aa13.22□□□□□ -0.29
CDC42BPA-205ENST00000366769 NLRP13Q86W25 1043 aa13.21□□□□□ -0.29
CDC42BPA-205ENST00000366769 KRT222Q8N1A0 295 aa13.21□□□□□ -0.29
CDC42BPA-205ENST00000366769 LMAN1P49257 510 aa13.21□□□□□ -0.29
CDC42BPA-205ENST00000366769 TTC31Q49AM3 519 aaPredicted RBP13.21□□□□□ -0.29
CDC42BPA-205ENST00000366769 NFXL1Q6ZNB6 911 aa13.21□□□□□ -0.29
CDC42BPA-205ENST00000366769 DDX11Q96FC9 970 aa13.21□□□□□ -0.29
CDC42BPA-205ENST00000366769 OFD1O75665 1012 aa13.21□□□□□ -0.29
CDC42BPA-205ENST00000366769 CNPY4Q8N129 248 aa13.21□□□□□ -0.3
CDC42BPA-205ENST00000366769 DRC1Q96MC2 740 aa13.2□□□□□ -0.3
CDC42BPA-205ENST00000366769 BANK1Q8NDB2 785 aa13.2□□□□□ -0.3
CDC42BPA-205ENST00000366769 HOOK1Q9UJC3 728 aaKnown RBP13.2□□□□□ -0.3
CDC42BPA-205ENST00000366769 MBD3O95983 291 aa13.2□□□□□ -0.3
CDC42BPA-205ENST00000366769 CPLX1O14810 134 aa13.2□□□□□ -0.3
CDC42BPA-205ENST00000366769 PHLDB1Q86UU1 1377 aa13.19□□□□□ -0.3
CDC42BPA-205ENST00000366769 MTMR7Q9Y216 660 aa13.19□□□□□ -0.3
CDC42BPA-205ENST00000366769 NUTM2FA1L443 756 aa13.19□□□□□ -0.3
CDC42BPA-205ENST00000366769 ANKRD62A6NC57 917 aa13.19□□□□□ -0.3
CDC42BPA-205ENST00000366769 ANO2Q9NQ90 1003 aa13.19□□□□□ -0.3
CDC42BPA-205ENST00000366769 TXLNBQ8N3L3 684 aa13.19□□□□□ -0.3
CDC42BPA-205ENST00000366769 ZBTB9Q96C00 473 aa13.19□□□□□ -0.3
CDC42BPA-205ENST00000366769 RNF187Q5TA31 235 aaPredicted RBP13.19□□□□□ -0.3
CDC42BPA-205ENST00000366769 INCENPQ9NQS7 918 aa13.19□□□□□ -0.3
CDC42BPA-205ENST00000366769 SMG6Q86US8 1419 aaKnown RBP13.19□□□□□ -0.3
CDC42BPA-205ENST00000366769 CPLX2Q6PUV4 134 aaKnown RBP13.19□□□□□ -0.3
CDC42BPA-205ENST00000366769 WASHC2AQ641Q2 1341 aa13.19□□□□□ -0.3
CDC42BPA-205ENST00000366769 AMPHP49418 695 aa13.19□□□□□ -0.3
CDC42BPA-205ENST00000366769 KDM4AO75164 1064 aa13.18□□□□□ -0.3
CDC42BPA-205ENST00000366769 FYB1O15117 783 aa13.18□□□□□ -0.3
CDC42BPA-205ENST00000366769 CCDC97Q96F63 343 aaPredicted RBP13.18□□□□□ -0.3
CDC42BPA-205ENST00000366769 ERCC4Q92889 916 aaPredicted RBP13.17□□□□□ -0.3
CDC42BPA-205ENST00000366769 EIF3JO75822 258 aaKnown RBP13.17□□□□□ -0.3
CDC42BPA-205ENST00000366769 C10orf67Q8IYJ2 551 aa13.17□□□□□ -0.3
CDC42BPA-205ENST00000366769 REC8O95072 547 aa13.17□□□□□ -0.3
CDC42BPA-205ENST00000366769 GGT6Q6P531 493 aa13.17□□□□□ -0.3
CDC42BPA-205ENST00000366769 DNAAF4Q8WXU2 420 aa13.17□□□□□ -0.3
CDC42BPA-205ENST00000366769 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.16□□□□□ -0.3
CDC42BPA-205ENST00000366769 EVA1CP58658 441 aa13.16□□□□□ -0.3
CDC42BPA-205ENST00000366769 NGDNQ8NEJ9 315 aaKnown RBP13.16□□□□□ -0.3
CDC42BPA-205ENST00000366769 ZRSR2Q15696 482 aaKnown RBP13.16□□□□□ -0.3
CDC42BPA-205ENST00000366769 SARNPP82979 210 aaKnown RBP13.16□□□□□ -0.3
CDC42BPA-205ENST00000366769 NACADO15069 1562 aa13.16□□□□□ -0.3
CDC42BPA-205ENST00000366769 NF2P35240 595 aa13.16□□□□□ -0.3
CDC42BPA-205ENST00000366769 ZNF830Q96NB3 372 aaPredicted RBP13.16□□□□□ -0.3
CDC42BPA-205ENST00000366769 LRRCC1Q9C099 1032 aa13.16□□□□□ -0.3
CDC42BPA-205ENST00000366769 CCP110O43303 1012 aa13.15□□□□□ -0.3
CDC42BPA-205ENST00000366769 CCDC91Q7Z6B0 441 aa13.15□□□□□ -0.3
CDC42BPA-205ENST00000366769 RSPH14Q9UHP6 348 aa13.15□□□□□ -0.3
CDC42BPA-205ENST00000366769 GBP2P32456 591 aaPredicted RBP13.15□□□□□ -0.3
CDC42BPA-205ENST00000366769 LNPKQ9C0E8 428 aa13.15□□□□□ -0.3
CDC42BPA-205ENST00000366769 FMNL2Q96PY5 1086 aa13.14□□□□□ -0.31
CDC42BPA-205ENST00000366769 TMCO3Q6UWJ1 677 aa13.14□□□□□ -0.31
CDC42BPA-205ENST00000366769 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.14□□□□□ -0.31
CDC42BPA-205ENST00000366769 V9GYY5 206 aaPredicted RBP13.14□□□□□ -0.31
CDC42BPA-205ENST00000366769 SYTL4Q96C24 671 aaPredicted RBP13.14□□□□□ -0.31
CDC42BPA-205ENST00000366769 RBM27Q9P2N5 1060 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms