RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 ABCC2Q92887 1545 aa6.67□□□□□ -1.34
CDC42BPA-204ENST00000366767 GNAI1P63096 354 aa6.67□□□□□ -1.34
CDC42BPA-204ENST00000366767 NCBP3Q53F19 620 aaKnown RBP6.66□□□□□ -1.34
CDC42BPA-204ENST00000366767 DISP3Q9P2K9 1392 aa6.66□□□□□ -1.34
CDC42BPA-204ENST00000366767 PER1O15534 1290 aaPredicted RBP6.66□□□□□ -1.34
CDC42BPA-204ENST00000366767 DDX11L8A8MPP1 907 aa6.66□□□□□ -1.34
CDC42BPA-204ENST00000366767 ADCY10Q96PN6 1610 aa6.66□□□□□ -1.34
CDC42BPA-204ENST00000366767 COG3Q96JB2 828 aa6.66□□□□□ -1.34
CDC42BPA-204ENST00000366767 FANCAO15360 1455 aa6.66□□□□□ -1.34
CDC42BPA-204ENST00000366767 RIPK4P57078 832 aa6.66□□□□□ -1.34
CDC42BPA-204ENST00000366767 DUSP27Q5VZP5 1158 aa6.66□□□□□ -1.34
CDC42BPA-204ENST00000366767 PPP6R1Q9UPN7 881 aa6.66□□□□□ -1.34
CDC42BPA-204ENST00000366767 SKOR2Q2VWA4 1001 aaPredicted RBP6.66□□□□□ -1.34
CDC42BPA-204ENST00000366767 TESK2Q96S53 571 aa6.65□□□□□ -1.34
CDC42BPA-204ENST00000366767 RRP7AQ9Y3A4 280 aaKnown RBP6.65□□□□□ -1.34
CDC42BPA-204ENST00000366767 ZMYM4Q5VZL5 1548 aa6.65□□□□□ -1.34
CDC42BPA-204ENST00000366767 CHMP5Q9NZZ3 219 aa6.65□□□□□ -1.34
CDC42BPA-204ENST00000366767 MBD5Q9P267 1494 aa6.65□□□□□ -1.34
CDC42BPA-204ENST00000366767 C14orf93Q9H972 538 aaKnown RBP6.65□□□□□ -1.35
CDC42BPA-204ENST00000366767 EID1Q9Y6B2 187 aa6.65□□□□□ -1.35
CDC42BPA-204ENST00000366767 WWC1Q8IX03 1113 aa6.65□□□□□ -1.35
CDC42BPA-204ENST00000366767 ABCC11Q96J66 1382 aa6.65□□□□□ -1.35
CDC42BPA-204ENST00000366767 MSH5O43196 834 aa6.65□□□□□ -1.35
CDC42BPA-204ENST00000366767 MFAP1P55081 439 aaKnown RBP6.64□□□□□ -1.35
CDC42BPA-204ENST00000366767 A2MP01023 1474 aa6.64□□□□□ -1.35
CDC42BPA-204ENST00000366767 KDM5BQ9UGL1 1544 aa6.64□□□□□ -1.35
CDC42BPA-204ENST00000366767 ZNF692Q9BU19 519 aaPredicted RBP6.64□□□□□ -1.35
CDC42BPA-204ENST00000366767 NSD3Q9BZ95 1437 aa6.64□□□□□ -1.35
CDC42BPA-204ENST00000366767 SLC12A5Q9H2X9 1139 aa6.64□□□□□ -1.35
CDC42BPA-204ENST00000366767 KDM5CP41229 1560 aa6.64□□□□□ -1.35
CDC42BPA-204ENST00000366767 KDM6BO15054 1643 aa6.64□□□□□ -1.35
CDC42BPA-204ENST00000366767 GCC1Q96CN9 775 aa6.64□□□□□ -1.35
CDC42BPA-204ENST00000366767 CD109Q6YHK3 1445 aa6.64□□□□□ -1.35
CDC42BPA-204ENST00000366767 POLR3AO14802 1390 aaPredicted RBP6.64□□□□□ -1.35
CDC42BPA-204ENST00000366767 MINK1Q8N4C8 1332 aaPredicted RBP6.64□□□□□ -1.35
CDC42BPA-204ENST00000366767 GOLGA6L1Q8N7Z2 621 aa6.63□□□□□ -1.35
CDC42BPA-204ENST00000366767 STK31Q9BXU1 1019 aa6.63□□□□□ -1.35
CDC42BPA-204ENST00000366767 MAST1Q9Y2H9 1570 aa6.63□□□□□ -1.35
CDC42BPA-204ENST00000366767 NFKBIBQ15653 356 aa6.63□□□□□ -1.35
CDC42BPA-204ENST00000366767 CCDC27Q2M243 656 aa6.63□□□□□ -1.35
CDC42BPA-204ENST00000366767 WDR7Q9Y4E6 1490 aa6.63□□□□□ -1.35
CDC42BPA-204ENST00000366767 TMEM132EQ6IEE7 984 aa6.63□□□□□ -1.35
CDC42BPA-204ENST00000366767 UHRF1BP1LA0JNW5 1464 aa6.63□□□□□ -1.35
CDC42BPA-204ENST00000366767 MVPQ14764 893 aaKnown RBP6.62□□□□□ -1.35
CDC42BPA-204ENST00000366767 ZNF518AQ6AHZ1 1483 aa6.62□□□□□ -1.35
CDC42BPA-204ENST00000366767 BCAR3O75815 825 aa6.62□□□□□ -1.35
CDC42BPA-204ENST00000366767 NUTM2DQ5VT03 806 aaPredicted RBP6.62□□□□□ -1.35
CDC42BPA-204ENST00000366767 ADGRF5Q8IZF2 1346 aa6.62□□□□□ -1.35
CDC42BPA-204ENST00000366767 MLECQ14165 292 aa6.62□□□□□ -1.35
CDC42BPA-204ENST00000366767 SLKQ9H2G2 1235 aaPredicted RBP6.62□□□□□ -1.35
CDC42BPA-204ENST00000366767 FCHSD2O94868 740 aa6.62□□□□□ -1.35
CDC42BPA-204ENST00000366767 BCL2L13Q9BXK5 485 aa6.62□□□□□ -1.35
CDC42BPA-204ENST00000366767 CABP2Q9NPB3 220 aa6.62□□□□□ -1.35
CDC42BPA-204ENST00000366767 TRAPPC8Q9Y2L5 1435 aa6.62□□□□□ -1.35
CDC42BPA-204ENST00000366767 IL16Q14005 1332 aa6.62□□□□□ -1.35
CDC42BPA-204ENST00000366767 GGNBP2Q9H3C7 697 aa6.62□□□□□ -1.35
CDC42BPA-204ENST00000366767 ST18O60284 1047 aa6.61□□□□□ -1.35
CDC42BPA-204ENST00000366767 ANKRD45Q5TZF3 282 aa6.61□□□□□ -1.35
CDC42BPA-204ENST00000366767 PANK1Q8TE04 598 aa6.61□□□□□ -1.35
CDC42BPA-204ENST00000366767 ATP10AO60312 1499 aa6.61□□□□□ -1.35
CDC42BPA-204ENST00000366767 BLMP54132 1417 aaPredicted RBP6.61□□□□□ -1.35
CDC42BPA-204ENST00000366767 PDZRN3Q9UPQ7 1066 aa6.61□□□□□ -1.35
CDC42BPA-204ENST00000366767 PAK3O75914 559 aaPredicted RBP6.61□□□□□ -1.35
CDC42BPA-204ENST00000366767 C14orf37Q86TY3 774 aa6.61□□□□□ -1.35
CDC42BPA-204ENST00000366767 ALDH1L2Q3SY69 923 aa6.61□□□□□ -1.35
CDC42BPA-204ENST00000366767 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.61□□□□□ -1.35
CDC42BPA-204ENST00000366767 ATF7IPQ6VMQ6 1270 aa6.61□□□□□ -1.35
CDC42BPA-204ENST00000366767 C22orf23Q9BZE7 217 aa6.61□□□□□ -1.35
CDC42BPA-204ENST00000366767 SENP3Q9H4L4 574 aaPredicted RBP6.61□□□□□ -1.35
CDC42BPA-204ENST00000366767 EXOSC9Q06265 439 aaKnown RBP6.61□□□□□ -1.35
CDC42BPA-204ENST00000366767 FAM13BQ9NYF5 915 aa6.61□□□□□ -1.35
CDC42BPA-204ENST00000366767 DENND4BO75064 1496 aaPredicted RBP6.6□□□□□ -1.35
CDC42BPA-204ENST00000366767 ISY1Q9ULR0 285 aaKnown RBP6.6□□□□□ -1.35
CDC42BPA-204ENST00000366767 ANKRD36BQ8N2N9 1353 aa6.6□□□□□ -1.35
CDC42BPA-204ENST00000366767 RARSP54136 660 aaKnown RBP6.6□□□□□ -1.35
CDC42BPA-204ENST00000366767 NOS1P29475 1434 aa6.6□□□□□ -1.35
CDC42BPA-204ENST00000366767 PREX2Q70Z35 1606 aa6.6□□□□□ -1.35
CDC42BPA-204ENST00000366767 SYAP1Q96A49 352 aaPredicted RBP6.6□□□□□ -1.35
CDC42BPA-204ENST00000366767 GOLGA6L4A6NEF3 574 aa6.6□□□□□ -1.35
CDC42BPA-204ENST00000366767 SAMD9LQ8IVG5 1584 aa6.59□□□□□ -1.35
CDC42BPA-204ENST00000366767 PRAM1Q96QH2 718 aa6.59□□□□□ -1.35
CDC42BPA-204ENST00000366767 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.59□□□□□ -1.35
CDC42BPA-204ENST00000366767 CDK19Q9BWU1 502 aa6.59□□□□□ -1.35
CDC42BPA-204ENST00000366767 AMPHP49418 695 aa6.59□□□□□ -1.35
CDC42BPA-204ENST00000366767 UBE2Q2Q8WVN8 375 aa6.59□□□□□ -1.35
CDC42BPA-204ENST00000366767 TMPOP42166 694 aaKnown RBP6.59□□□□□ -1.35
CDC42BPA-204ENST00000366767 SLC4A3P48751 1232 aa6.59□□□□□ -1.35
CDC42BPA-204ENST00000366767 INTS3Q68E01 1043 aaKnown RBP6.59□□□□□ -1.35
CDC42BPA-204ENST00000366767 REC8O95072 547 aa6.59□□□□□ -1.36
CDC42BPA-204ENST00000366767 CSPP1Q1MSJ5 1256 aa6.59□□□□□ -1.36
CDC42BPA-204ENST00000366767 NGDNQ8NEJ9 315 aaKnown RBP6.59□□□□□ -1.36
CDC42BPA-204ENST00000366767 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.58□□□□□ -1.36
CDC42BPA-204ENST00000366767 NUCB2P80303 420 aa6.58□□□□□ -1.36
CDC42BPA-204ENST00000366767 OS9Q13438 667 aaPredicted RBP6.58□□□□□ -1.36
CDC42BPA-204ENST00000366767 SBNO2Q9Y2G9 1366 aa6.58□□□□□ -1.36
CDC42BPA-204ENST00000366767 NOC3LQ8WTT2 800 aaKnown RBP6.58□□□□□ -1.36
CDC42BPA-204ENST00000366767 MAP7D2Q96T17 732 aa6.58□□□□□ -1.36
CDC42BPA-204ENST00000366767 FAM69CQ0P6D2 419 aa6.58□□□□□ -1.36
CDC42BPA-204ENST00000366767 PLXNC1O60486 1568 aa6.58□□□□□ -1.36
CDC42BPA-204ENST00000366767 TPM2P07951 284 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms