RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 DNMT1P26358 1616 aaKnown RBP14.38□□□□□ -0.11
CDC42BPA-202ENST00000366764 ABCC11Q96J66 1382 aa14.38□□□□□ -0.11
CDC42BPA-202ENST00000366764 RNF20Q5VTR2 975 aa14.38□□□□□ -0.11
CDC42BPA-202ENST00000366764 CWC22Q9HCG8 908 aaKnown RBP14.38□□□□□ -0.11
CDC42BPA-202ENST00000366764 GOLGA6L19H0YKK7 550 aa14.37□□□□□ -0.11
CDC42BPA-202ENST00000366764 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.37□□□□□ -0.11
CDC42BPA-202ENST00000366764 MTHFSP49914 203 aa14.37□□□□□ -0.11
CDC42BPA-202ENST00000366764 DHX29Q7Z478 1369 aaKnown RBP14.37□□□□□ -0.11
CDC42BPA-202ENST00000366764 GRIN2AQ12879 1464 aa14.37□□□□□ -0.11
CDC42BPA-202ENST00000366764 GPRASP1Q5JY77 1395 aa14.37□□□□□ -0.11
CDC42BPA-202ENST00000366764 HMGN5P82970 282 aaKnown RBP14.37□□□□□ -0.11
CDC42BPA-202ENST00000366764 HSP90B1P14625 803 aaKnown RBP14.37□□□□□ -0.11
CDC42BPA-202ENST00000366764 LNPKQ9C0E8 428 aa14.36□□□□□ -0.11
CDC42BPA-202ENST00000366764 LRPPRCP42704 1394 aaKnown RBP14.36□□□□□ -0.11
CDC42BPA-202ENST00000366764 MVPQ14764 893 aaKnown RBP14.36□□□□□ -0.11
CDC42BPA-202ENST00000366764 NBPF1Q3BBV0 1214 aa14.36□□□□□ -0.11
CDC42BPA-202ENST00000366764 NGDNQ8NEJ9 315 aaKnown RBP14.36□□□□□ -0.11
CDC42BPA-202ENST00000366764 SLFN5Q08AF3 891 aa14.36□□□□□ -0.11
CDC42BPA-202ENST00000366764 PDIA4P13667 645 aaKnown RBP14.35□□□□□ -0.11
CDC42BPA-202ENST00000366764 SHANK2Q9UPX8 1470 aa14.35□□□□□ -0.11
CDC42BPA-202ENST00000366764 ERC2O15083 957 aa14.35□□□□□ -0.11
CDC42BPA-202ENST00000366764 ATAD2Q6PL18 1390 aa14.34□□□□□ -0.11
CDC42BPA-202ENST00000366764 MINK1Q8N4C8 1332 aaPredicted RBP14.34□□□□□ -0.11
CDC42BPA-202ENST00000366764 CCDC184Q52MB2 194 aa14.34□□□□□ -0.11
CDC42BPA-202ENST00000366764 PDZRN3Q9UPQ7 1066 aa14.34□□□□□ -0.11
CDC42BPA-202ENST00000366764 ARHGEF11O15085 1522 aa14.34□□□□□ -0.11
CDC42BPA-202ENST00000366764 PDCP20941 246 aa14.34□□□□□ -0.11
CDC42BPA-202ENST00000366764 RILPL2Q969X0 211 aa14.34□□□□□ -0.11
CDC42BPA-202ENST00000366764 H3BQV1 296 aa14.34□□□□□ -0.11
CDC42BPA-202ENST00000366764 IFFO2Q5TF58 517 aa14.34□□□□□ -0.11
CDC42BPA-202ENST00000366764 IL27Q8NEV9 243 aa14.34□□□□□ -0.11
CDC42BPA-202ENST00000366764 NSD2O96028 1365 aa14.33□□□□□ -0.11
CDC42BPA-202ENST00000366764 MSH5O43196 834 aa14.33□□□□□ -0.12
CDC42BPA-202ENST00000366764 ATF7IPQ6VMQ6 1270 aa14.33□□□□□ -0.12
CDC42BPA-202ENST00000366764 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.33□□□□□ -0.12
CDC42BPA-202ENST00000366764 GOLGA6L1Q8N7Z2 621 aa14.33□□□□□ -0.12
CDC42BPA-202ENST00000366764 SCAF11Q99590 1463 aaKnown RBP14.32□□□□□ -0.12
CDC42BPA-202ENST00000366764 MLECQ14165 292 aa14.32□□□□□ -0.12
CDC42BPA-202ENST00000366764 BECN2A8MW95 431 aa14.32□□□□□ -0.12
CDC42BPA-202ENST00000366764 BRPF3Q9ULD4 1205 aa14.32□□□□□ -0.12
CDC42BPA-202ENST00000366764 GNAI3P08754 354 aa14.32□□□□□ -0.12
CDC42BPA-202ENST00000366764 GORABQ5T7V8 394 aa14.32□□□□□ -0.12
CDC42BPA-202ENST00000366764 NEXNQ0ZGT2 675 aa14.31□□□□□ -0.12
CDC42BPA-202ENST00000366764 DHX8Q14562 1220 aaKnown RBP14.31□□□□□ -0.12
CDC42BPA-202ENST00000366764 WDR62O43379 1518 aa14.31□□□□□ -0.12
CDC42BPA-202ENST00000366764 ASXL1Q8IXJ9 1541 aa14.31□□□□□ -0.12
CDC42BPA-202ENST00000366764 INSRP06213 1382 aa14.31□□□□□ -0.12
CDC42BPA-202ENST00000366764 URB2Q14146 1524 aaKnown RBP14.3□□□□□ -0.12
CDC42BPA-202ENST00000366764 SLC52A1Q9NWF4 448 aa14.3□□□□□ -0.12
CDC42BPA-202ENST00000366764 PBRM1Q86U86 1689 aa14.3□□□□□ -0.12
CDC42BPA-202ENST00000366764 ANO2Q9NQ90 1003 aa14.3□□□□□ -0.12
CDC42BPA-202ENST00000366764 SF3A1Q15459 793 aaKnown RBP14.3□□□□□ -0.12
CDC42BPA-202ENST00000366764 MCM4P33991 863 aa14.3□□□□□ -0.12
CDC42BPA-202ENST00000366764 A0A0G2JS52 829 aa14.3□□□□□ -0.12
CDC42BPA-202ENST00000366764 MCTP1Q6DN14 999 aa14.3□□□□□ -0.12
CDC42BPA-202ENST00000366764 C11orf95C9JLR9 678 aaPredicted RBP14.3□□□□□ -0.12
CDC42BPA-202ENST00000366764 GPATCH8Q9UKJ3 1502 aaKnown RBP14.29□□□□□ -0.12
CDC42BPA-202ENST00000366764 NOL8Q76FK4 1167 aaKnown RBP14.29□□□□□ -0.12
CDC42BPA-202ENST00000366764 FAM184AQ8NB25 1140 aa14.29□□□□□ -0.12
CDC42BPA-202ENST00000366764 SMC3Q9UQE7 1217 aa14.29□□□□□ -0.12
CDC42BPA-202ENST00000366764 CFAP65Q6ZU64 1925 aaKnown RBP14.29□□□□□ -0.12
CDC42BPA-202ENST00000366764 RRP9O43818 475 aaKnown RBP14.29□□□□□ -0.12
CDC42BPA-202ENST00000366764 PARD3Q8TEW0 1356 aa14.29□□□□□ -0.12
CDC42BPA-202ENST00000366764 C9orf78Q9NZ63 289 aaPredicted RBP14.28□□□□□ -0.12
CDC42BPA-202ENST00000366764 DDX58O95786 925 aaKnown RBP14.28□□□□□ -0.12
CDC42BPA-202ENST00000366764 CFAP70Q5T0N1 1121 aa14.28□□□□□ -0.12
CDC42BPA-202ENST00000366764 CPLX2Q6PUV4 134 aaKnown RBP14.28□□□□□ -0.12
CDC42BPA-202ENST00000366764 SAMD9Q5K651 1589 aa14.28□□□□□ -0.12
CDC42BPA-202ENST00000366764 WWC1Q8IX03 1113 aa14.28□□□□□ -0.12
CDC42BPA-202ENST00000366764 K7ELQ4 463 aaPredicted RBP14.28□□□□□ -0.12
CDC42BPA-202ENST00000366764 PLEKHG5O94827 1062 aa14.28□□□□□ -0.12
CDC42BPA-202ENST00000366764 HOOK1Q9UJC3 728 aaKnown RBP14.28□□□□□ -0.12
CDC42BPA-202ENST00000366764 TEFQ10587 303 aa14.28□□□□□ -0.12
CDC42BPA-202ENST00000366764 GPS2Q13227 327 aa14.28□□□□□ -0.12
CDC42BPA-202ENST00000366764 ELL2O00472 640 aaPredicted RBP14.28□□□□□ -0.12
CDC42BPA-202ENST00000366764 HIP1O00291 1037 aa14.27□□□□□ -0.12
CDC42BPA-202ENST00000366764 DUOX2Q9NRD8 1548 aa14.27□□□□□ -0.12
CDC42BPA-202ENST00000366764 NSD3Q9BZ95 1437 aa14.27□□□□□ -0.13
CDC42BPA-202ENST00000366764 NAT10Q9H0A0 1025 aaKnown RBP14.27□□□□□ -0.13
CDC42BPA-202ENST00000366764 IFIT2P09913 472 aaKnown RBP14.27□□□□□ -0.13
CDC42BPA-202ENST00000366764 SRCIN1Q9C0H9 1055 aa14.27□□□□□ -0.13
CDC42BPA-202ENST00000366764 VSIG10Q8N0Z9 540 aa14.27□□□□□ -0.13
CDC42BPA-202ENST00000366764 BCAR3O75815 825 aa14.27□□□□□ -0.13
CDC42BPA-202ENST00000366764 PSMA5P28066 241 aa14.27□□□□□ -0.13
CDC42BPA-202ENST00000366764 FKBP5Q13451 457 aaPredicted RBP14.27□□□□□ -0.13
CDC42BPA-202ENST00000366764 NUTM2DQ5VT03 806 aaPredicted RBP14.26□□□□□ -0.13
CDC42BPA-202ENST00000366764 GRPEL1Q9HAV7 217 aa14.26□□□□□ -0.13
CDC42BPA-202ENST00000366764 TPM1P09493 284 aa14.26□□□□□ -0.13
CDC42BPA-202ENST00000366764 KIAA0556O60303 1618 aa14.26□□□□□ -0.13
CDC42BPA-202ENST00000366764 C1orf141Q5JVX7 400 aa14.26□□□□□ -0.13
CDC42BPA-202ENST00000366764 CCT4P50991 539 aaKnown RBP14.26□□□□□ -0.13
CDC42BPA-202ENST00000366764 ADAMTS12P58397 1594 aa14.26□□□□□ -0.13
CDC42BPA-202ENST00000366764 ALDH1L2Q3SY69 923 aa14.25□□□□□ -0.13
CDC42BPA-202ENST00000366764 FOXD4L5Q5VV16 416 aaPredicted RBP14.25□□□□□ -0.13
CDC42BPA-202ENST00000366764 FOXD4L4Q8WXT5 416 aaPredicted RBP14.25□□□□□ -0.13
CDC42BPA-202ENST00000366764 FCHSD2O94868 740 aa14.25□□□□□ -0.13
CDC42BPA-202ENST00000366764 CHD1LQ86WJ1 897 aa14.25□□□□□ -0.13
CDC42BPA-202ENST00000366764 FAM13BQ9NYF5 915 aa14.25□□□□□ -0.13
CDC42BPA-202ENST00000366764 ESPNB1AK53 854 aa14.24□□□□□ -0.13
CDC42BPA-202ENST00000366764 EXOSC9Q06265 439 aaKnown RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 170.5 ms