RNA–Protein interactions for RNA: ENST00000366666.6

CAPN9-203, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-203ENST00000366666 TULP4Q9NRJ4 1543 aa16.97■□□□□ 0.31
CAPN9-203ENST00000366666 XRN1Q8IZH2 1706 aaKnown RBP16.97■□□□□ 0.31
CAPN9-203ENST00000366666 SBNO2Q9Y2G9 1366 aa16.96■□□□□ 0.31
CAPN9-203ENST00000366666 MYOM1P52179 1685 aa16.95■□□□□ 0.3
CAPN9-203ENST00000366666 KCNA6P17658 529 aa16.94■□□□□ 0.3
CAPN9-203ENST00000366666 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.94■□□□□ 0.3
CAPN9-203ENST00000366666 MIER1Q8N108 512 aa16.92■□□□□ 0.3
CAPN9-203ENST00000366666 FAM135BQ49AJ0 1406 aa16.92■□□□□ 0.3
CAPN9-203ENST00000366666 RBM33Q96EV2 1170 aaKnown RBP16.91■□□□□ 0.3
CAPN9-203ENST00000366666 STRCP1A6NGW2 1772 aa16.91■□□□□ 0.3
CAPN9-203ENST00000366666 CABP2Q9NPB3 220 aa16.91■□□□□ 0.3
CAPN9-203ENST00000366666 PIK3R4Q99570 1358 aa16.89■□□□□ 0.3
CAPN9-203ENST00000366666 PTCH1Q13635 1447 aa16.89■□□□□ 0.29
CAPN9-203ENST00000366666 SIRT1Q96EB6 747 aa16.89■□□□□ 0.29
CAPN9-203ENST00000366666 EVC2Q86UK5 1308 aa16.88■□□□□ 0.29
CAPN9-203ENST00000366666 CDK19Q9BWU1 502 aa16.87■□□□□ 0.29
CAPN9-203ENST00000366666 SRPK2P78362 688 aaKnown RBP16.86■□□□□ 0.29
CAPN9-203ENST00000366666 NWD1Q149M9 1564 aa16.86■□□□□ 0.29
CAPN9-203ENST00000366666 CDCA8Q53HL2 280 aa16.85■□□□□ 0.29
CAPN9-203ENST00000366666 SLC12A5Q9H2X9 1139 aa16.85■□□□□ 0.29
CAPN9-203ENST00000366666 PANK3Q9H999 370 aa16.85■□□□□ 0.29
CAPN9-203ENST00000366666 SLC24A1O60721 1099 aa16.84■□□□□ 0.29
CAPN9-203ENST00000366666 CNGB1Q14028 1251 aaPredicted RBP16.84■□□□□ 0.29
CAPN9-203ENST00000366666 NALCNQ8IZF0 1738 aa16.84■□□□□ 0.29
CAPN9-203ENST00000366666 YTHDC1Q96MU7 727 aaKnown RBP16.84■□□□□ 0.29
CAPN9-203ENST00000366666 ADGRB2O60241 1585 aa16.83■□□□□ 0.29
CAPN9-203ENST00000366666 WASLO00401 505 aaPredicted RBP16.83■□□□□ 0.28
CAPN9-203ENST00000366666 TMC1Q8TDI8 760 aa16.82■□□□□ 0.28
CAPN9-203ENST00000366666 NUTM2FA1L443 756 aa16.82■□□□□ 0.28
CAPN9-203ENST00000366666 RGPD8O14715 1765 aaPredicted RBP16.82■□□□□ 0.28
CAPN9-203ENST00000366666 PER1O15534 1290 aaPredicted RBP16.81■□□□□ 0.28
CAPN9-203ENST00000366666 PRR36Q9H6K5 1346 aa16.8■□□□□ 0.28
CAPN9-203ENST00000366666 USP32Q8NFA0 1604 aa16.79■□□□□ 0.28
CAPN9-203ENST00000366666 CARD14Q9BXL6 1004 aa16.79■□□□□ 0.28
CAPN9-203ENST00000366666 ZNF335Q9H4Z2 1342 aaPredicted RBP16.79■□□□□ 0.28
CAPN9-203ENST00000366666 ATP7BP35670 1465 aa16.78■□□□□ 0.28
CAPN9-203ENST00000366666 PUS7Q96PZ0 661 aaKnown RBP16.78■□□□□ 0.28
CAPN9-203ENST00000366666 PROSER2Q86WR7 435 aaPredicted RBP16.77■□□□□ 0.28
CAPN9-203ENST00000366666 CD163L1Q9NR16 1453 aa16.77■□□□□ 0.27
CAPN9-203ENST00000366666 XIRP1Q702N8 1843 aaKnown RBP16.77■□□□□ 0.27
CAPN9-203ENST00000366666 NUDT16Q96DE0 195 aaKnown RBP16.77■□□□□ 0.27
CAPN9-203ENST00000366666 CABP1Q9NZU7 370 aa16.77■□□□□ 0.27
CAPN9-203ENST00000366666 ATAD2Q6PL18 1390 aa16.76■□□□□ 0.27
CAPN9-203ENST00000366666 NKTRP30414 1462 aaKnown RBP16.76■□□□□ 0.27
CAPN9-203ENST00000366666 ANP32CO43423 234 aa16.75■□□□□ 0.27
CAPN9-203ENST00000366666 FMN2Q9NZ56 1722 aa16.75■□□□□ 0.27
CAPN9-203ENST00000366666 TOPAZ1Q8N9V7 1692 aa16.75■□□□□ 0.27
CAPN9-203ENST00000366666 ADGRL3Q9HAR2 1447 aa16.74■□□□□ 0.27
CAPN9-203ENST00000366666 PPIP5K1Q6PFW1 1433 aa16.74■□□□□ 0.27
CAPN9-203ENST00000366666 A0A1W2PP64 1363 aa16.74■□□□□ 0.27
CAPN9-203ENST00000366666 PRKRIP1Q9H875 184 aaPredicted RBP16.74■□□□□ 0.27
CAPN9-203ENST00000366666 TMEM94Q12767 1356 aa16.73■□□□□ 0.27
CAPN9-203ENST00000366666 CC2D1BQ5T0F9 858 aaKnown RBP16.72■□□□□ 0.27
CAPN9-203ENST00000366666 C14orf37Q86TY3 774 aa16.72■□□□□ 0.27
CAPN9-203ENST00000366666 CDC42BPGQ6DT37 1551 aa16.72■□□□□ 0.27
CAPN9-203ENST00000366666 ANKRD36BQ8N2N9 1353 aa16.72■□□□□ 0.27
CAPN9-203ENST00000366666 NSD3Q9BZ95 1437 aa16.72■□□□□ 0.27
CAPN9-203ENST00000366666 CCDC61Q9Y6R9 512 aa16.71■□□□□ 0.27
CAPN9-203ENST00000366666 AMER1Q5JTC6 1135 aaPredicted RBP16.71■□□□□ 0.27
CAPN9-203ENST00000366666 KNSTRNQ9Y448 316 aa16.71■□□□□ 0.27
CAPN9-203ENST00000366666 NINLQ9Y2I6 1382 aa16.69■□□□□ 0.26
CAPN9-203ENST00000366666 AKAP12Q02952 1782 aa16.69■□□□□ 0.26
CAPN9-203ENST00000366666 LRRC7Q96NW7 1537 aa16.69■□□□□ 0.26
CAPN9-203ENST00000366666 ITSN1Q15811 1721 aa16.69■□□□□ 0.26
CAPN9-203ENST00000366666 CCDC184Q52MB2 194 aa16.68■□□□□ 0.26
CAPN9-203ENST00000366666 PMFBP1Q8TBY8 1022 aa16.68■□□□□ 0.26
CAPN9-203ENST00000366666 DMRT2Q9Y5R5 561 aa16.68■□□□□ 0.26
CAPN9-203ENST00000366666 CPSF1Q10570 1443 aaKnown RBP16.67■□□□□ 0.26
CAPN9-203ENST00000366666 MON2Q7Z3U7 1717 aa16.67■□□□□ 0.26
CAPN9-203ENST00000366666 AEBP2Q6ZN18 517 aaPredicted RBP16.67■□□□□ 0.26
CAPN9-203ENST00000366666 C19orf44Q9H6X5 657 aa16.66■□□□□ 0.26
CAPN9-203ENST00000366666 TERF2IPQ9NYB0 399 aa16.66■□□□□ 0.26
CAPN9-203ENST00000366666 ACEP12821 1306 aa16.66■□□□□ 0.26
CAPN9-203ENST00000366666 KTN1Q86UP2 1357 aaKnown RBP16.65■□□□□ 0.26
CAPN9-203ENST00000366666 PARD3Q8TEW0 1356 aa16.65■□□□□ 0.26
CAPN9-203ENST00000366666 HDGFL2Q7Z4V5 671 aaPredicted RBP16.64■□□□□ 0.25
CAPN9-203ENST00000366666 ANKARQ7Z5J8 1434 aa16.64■□□□□ 0.25
CAPN9-203ENST00000366666 PLEKHG3A1L390 1219 aa16.64■□□□□ 0.25
CAPN9-203ENST00000366666 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.63■□□□□ 0.25
CAPN9-203ENST00000366666 ORAI2Q96SN7 254 aa16.63■□□□□ 0.25
CAPN9-203ENST00000366666 KIF20BQ96Q89 1820 aa16.62■□□□□ 0.25
CAPN9-203ENST00000366666 NRKQ7Z2Y5 1582 aa16.62■□□□□ 0.25
CAPN9-203ENST00000366666 ESCO1Q5FWF5 840 aa16.61■□□□□ 0.25
CAPN9-203ENST00000366666 NCOA3Q9Y6Q9 1424 aa16.61■□□□□ 0.25
CAPN9-203ENST00000366666 LTBP4Q8N2S1 1624 aa16.61■□□□□ 0.25
CAPN9-203ENST00000366666 GGNBP2Q9H3C7 697 aa16.61■□□□□ 0.25
CAPN9-203ENST00000366666 NPC1L1Q9UHC9 1359 aa16.61■□□□□ 0.25
CAPN9-203ENST00000366666 MST1RQ04912 1400 aa16.61■□□□□ 0.25
CAPN9-203ENST00000366666 FYB1O15117 783 aa16.6■□□□□ 0.25
CAPN9-203ENST00000366666 CGNL1Q0VF96 1302 aa16.6■□□□□ 0.25
CAPN9-203ENST00000366666 C1orf167Q5SNV9 1468 aa16.6■□□□□ 0.25
CAPN9-203ENST00000366666 RALBP1Q15311 655 aa16.6■□□□□ 0.25
CAPN9-203ENST00000366666 ZRANB1Q9UGI0 708 aa16.6■□□□□ 0.25
CAPN9-203ENST00000366666 POLR3AO14802 1390 aaPredicted RBP16.6■□□□□ 0.25
CAPN9-203ENST00000366666 USP6P35125 1406 aa16.59■□□□□ 0.25
CAPN9-203ENST00000366666 MSH6P52701 1360 aa16.59■□□□□ 0.25
CAPN9-203ENST00000366666 ATF3P18847 181 aa16.59■□□□□ 0.25
CAPN9-203ENST00000366666 NGDNQ8NEJ9 315 aaKnown RBP16.59■□□□□ 0.25
CAPN9-203ENST00000366666 ANKRD26Q9UPS8 1709 aa16.59■□□□□ 0.25
CAPN9-203ENST00000366666 EDC4Q6P2E9 1401 aaKnown RBP16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms